Magallana gigas (Pacific oyster): 105335862
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Entry
105335862 CDS
T03920
Name
(RefSeq) remodeling and spacing factor 1 isoform X1
KO
K11657
remodeling and spacing factor 1
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105335862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
crg03036
]
105335862
Chromosome and associated proteins [BR:
crg03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
105335862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
WSD
zf-HC5HC2H
PHD_2
PHD-1st_NSD
C1_2
Motif
Other DBs
NCBI-GeneID:
105335862
NCBI-ProteinID:
XP_011438293
LinkDB
All DBs
Position
8:complement(32809777..32827408)
Genome browser
AA seq
2473 aa
AA seq
DB search
MAAASENDCLNDPNFAVICNFLDRYGEMIGLGDISYTDLQTWLEDTKHVPSFLVDLHVKL
LRRMGKSSVSTERWERYVIKFIHTYSSVDAWEVERFGYKHCKITTKLTILKNLLEKQFDF
NSKFKEQINAKPAEDMRFEPLGRDKNGLAYWYLIDKEFNVRVYREDQDDVDAETWEVVCK
SRNELAQLIGTLENQIQNNDVKEETESESVSLTENTNGDVKKELSDDEDSGKDTTGFSNL
KKEPDKMDEVDGGTEDKEDGADDKKNVDVIKCEKRDKDQNVKVEVKEVKVEVKEVKAEVK
EECSVSLEETTTNKEETTAVKEESMQEENVKDSVKVEDGVSIKQESSKERKEESTEVKMD
DSSKTEDNLKDKEGLPSETRVGESLGEDRKTGEDPPFEVDMKDIADEEKNPQHDKDSSEE
VKEIKAEDGTSMEDETVKTEENVSESDNISKEEEIDKMEENISKENISTKGETEKIGENV
SKTQDIFTEESTEKVEENINRSERPEKVIDHKESAKSQTLDVSETKSESAESDTVKSEEQ
VENKEVDPEKSTVSNDESKSINTFNSIKPCETDGNVKSVSTEEISHTDKEKSDDKIQSQE
TSSNERTSVGEEKPLGDAVVKDSKVEVSSHNEDNLDKTPKEGKTDSQDEEGISTKSKESE
VEARSSTNNDKEISSMEESESKIKSSDLIDKETNSDSSLKVSNEEVKDLKNESAVDSTND
SDEKCLKEKEDLKVEDTVDSKHSENENIEKGSTEKAEKTEEILHSSEQDKKVDALSSKVD
ENQQVNVSKTGTGIENEEKAEGKDLQNAPSKKIIDDAKVDDTDKDASISLNDANENQEND
VNKGQAKNDQEEMKEEKNEESKIESEKTLEKAKQESPANEVQQEKDPDTAKQSALKTKKQ
NLKGRKRGIEFDESAEDSPVEPNSKKAKDGKKIIPRGKRRTPKKVDSSSDSDDIPLSKIG
NKSGDSAKKRTESSTPSRKSTRPVKKKKVSSDDEEEEESPKKTKSKRRNIAEKPSESEDE
EEGPETTKKGSSKKSKPPTKKTKKQEEQGSSDDDLPLKNSQTAKNAKAKTEEEAASDEDD
QGRRRSARVRNMRKKKDPTPEPSSFEEDNVDTEFEVGSEEETSDDEFTPTKGRNAQRQEA
RKRQLEEDKAEEEIPNDTPCCKCQKTHQPEWLLLCDKCDAAFHTACLRPPLMIIPDGDWY
CPPCEHKSLVSRLQENLKDLDTNLKKHERIIKRKQRLAYVGISLDNILKEEYKEKKENIA
PDEEEYESEESQKSFNPKPRKSKYIKRTCRQRNTISYKFEDFDDMIDKAIKQEVEEVKEY
KKHNYGRSRGKDMANIYEAEGREYIPSDEEKLDKPPPVVNRKKRTRRLTTLDSDDDDDQG
EESEEFHLSDETVSEVPEEDQEDTEDEEEISDYSEDGEGWRSGRRSTRKPTRRSSRKRGR
HSIFKDFVVDEDEDSEENRRTARRSARKRVTYRDPSSEEEAETEETEEESFDSDDLCSED
SDSKNKKSKKKMEIAKKKKKLETSSETEQESEGSVVKKKSKSSSKKKAKKKVEESESDSE
DERNRRSRRNVKKIDFKSLMMSETESEDGGKSSKKKKKVSSSESASSDETGSESEEGEEE
AVKKKKKNVIRDESSGTDEYEPEDKNSKLEEKDIEKSVAEDKTEEKTEEPSADSLVVKSD
KEKMDTKAELNVPDISAAPPNPSNVVTSENSSIPMNRGFEDQAVHQNVPPQQHNMYSNFS
NVPQGPQNVGFHPPQQFPNQRLPYSGMDKPVFQPQPGPMKSPPHLPTPPNHPHSHNQRHI
SSPPQGISSPPPFPGQNRMASPPHQMMSPSHSQAPPHSQMNPRMSYPSPQHGPRPGDPQN
FPNSPPPVPSSQGTPMQFDPRMHQNRMPMDYRGPHPRMLNNSNNPYSQYGNLPPGPQAMN
FQNQMRMHGSVPSRMEGPGQMDPVSSSPGGPLTSLGQMVVPGYQGPSQQIPRPGGPPNSM
NMGMPRHNMPPIQQSPHSIPQSSASQNAGMLSNTQGQHMPSNMMMQNMPPSSSSSQSVGF
NVPSKGMPPSYPGQTPALSNSSQSTTPPASDAPKAGSKRGRPKGSKSKKKKDAAAENESS
KSPGSSPQIDAPKFPFPIPPNGEMDQRQMHPAGVPENLQRPMMPGHENRVRPSPYIGRNE
AIQGHPVSHAPPPPQPSQPPSDSSSRPPDPKVQSTEDKQRLKDNDKHKRPPENDTQKKPV
EEAKSNPSSDDKQKPILSEGSMKQGVEIETGGRQTGKEMMHRPPMGAVGQRPLGPEMGHQ
IPGPDMGQRPMIPPSSQMGQHPMPPQFSDMSQRMMHPGMMPPRMMDSRGMPMLPHGHPMR
APMSYPGFPYNRDQYGINGHPASIHSSMQDQSSFSSMNPAMMSSPHQNPMMHPSHVSPSM
GGGRGFMIDNLLEKNQKSAMSSFSENLEEGASTPAESKGDSSQIEQEYGPAYQGDQEEEG
VSDIADIVKCFKA
NT seq
7422 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgtcagaaaatgattgtctcaatgacccaaactttgcagttatttgtaat
tttttggaccgttatggtgaaatgataggccttggagatatatcctacacagatttacaa
acatggcttgaagacacgaagcatgtcccctctttcctggtagacctgcatgttaaactt
cttagacggatggggaaaagttccgtttctacagagcgatgggaacgctatgtaatcaag
ttcatacacacctactcaagtgtagatgcgtgggaagtggagaggtttggatacaagcac
tgcaaaataaccactaaacttacaattctaaagaatctgcttgagaaacagtttgacttc
aactccaagttcaaagagcagataaatgccaagccagcagaagacatgaggtttgagcct
cttggtcgagacaaaaacggactagcctattggtacctcattgataaagaattcaatgtg
cgagtgtacagagaggaccaagatgatgtggatgcagagacttgggaagttgtctgcaag
agcaggaatgaactcgcccagctgattggaacattggagaaccaaatccagaacaacgat
gttaaagaggagactgagtcagaatcggtctcattgacagaaaacacaaacggtgacgtc
aagaaggagctgagtgacgatgaagactctggcaaagacacgactggattctccaacctg
aagaaagaaccagataaaatggatgaagttgacggaggaacagaagacaaggaagatggt
gcagatgacaagaaaaatgtcgatgtcatcaagtgtgaaaaaagggacaaagatcagaat
gtgaaagtggaggtcaaagaagtgaaagtggaggtcaaagaagtgaaagcagaggtcaaa
gaagaatgttcagtgagtttggaagaaaccacaacaaataaggaagagaccacagcagta
aaggaagaaagtatgcaggaagaaaatgtcaaagattcggttaaagtggaagatggtgtc
agcataaaacaagaatcttccaaagaaaggaaagaagaatccacagaggtaaaaatggat
gattcctcgaaaacggaagataatctgaaagataaggaaggtttgccgagtgaaacgaga
gtgggagagtcattaggagaggacagaaaaactggagaggaccctccttttgaagtggat
atgaaggatatagcagacgaggaaaaaaatccacagcatgataaagattcctccgaggaa
gtaaaagagatcaaagcagaggatggtacttccatggaagacgagactgttaaaacagag
gaaaatgtttccgaatcagacaacatttctaaagaggaagagatcgataaaatggaagaa
aatatttcaaaagaaaatatttcaacaaaaggagaaacagaaaagattggggaaaatgtt
tccaaaacgcaggacattttcacggaagaaagtacagaaaaagtggaggaaaatatcaac
agatcagaacgtcctgagaaagttatagaccataaggagtcagcaaaatctcaaacctta
gatgtgtcggagaccaaatctgaaagtgcggaatctgatactgtaaaatctgaagagcaa
gttgaaaataaagaggtggatccggagaaaagtactgtcagcaatgatgaaagtaaatcc
attaatacctttaattctattaaaccatgtgagacagatggaaatgttaaaagtgtttct
actgaagaaatttcacatactgataaggagaagtctgatgataaaatacaatcacaggaa
actagttctaatgaaagaacttctgtcggtgaagaaaaacctcttggtgatgcagttgtg
aaagactcaaaagtagaagtcagtagtcataatgaagacaatttagacaaaacacccaaa
gaaggtaaaacagattcacaagacgaggagggaatttctactaagagtaaggagagtgaa
gttgaagcaaggagttctacaaataatgataaggaaattagttcaatggaggaaagtgag
tctaaaataaaatcatcagatcttatagataaagaaaccaattctgatagttctttaaaa
gtttccaatgaagaggttaaagatttaaaaaacgaatctgccgtagattctactaatgac
tctgacgagaaatgtttgaaagagaaggaagatttgaaagtagaagatactgttgactcg
aaacattcagaaaatgaaaatatcgagaaaggttccacagaaaaagctgagaaaacggaa
gaaatattacattctagtgaacaggataaaaaagttgatgctctaagtagtaaagttgat
gaaaatcaacaggtaaatgtgtctaaaactggtacaggaattgaaaatgaagaaaaggct
gaagggaaagatctgcagaatgctccttcaaagaaaatcattgatgatgcaaaagtagat
gatacggacaaagatgcttcaatttcattaaatgatgctaatgaaaatcaagaaaatgat
gttaataagggtcaagccaagaatgatcaagaggaaatgaaggaagaaaagaatgaggaa
agtaagatagaatcagaaaagacactagagaaagccaaacaagaatctccagcgaatgaa
gtccagcaggaaaaggatccagacactgcaaaacagagtgctctgaaaacgaaaaaacag
aatctgaaagggcgtaaaagggggattgagttcgacgaatctgccgaagattcccccgtg
gaacctaactcaaagaaagcgaaggacgggaagaaaataattccaagagggaaacgaagg
acccccaaaaaagtggattcctcgtcggatagcgatgacattccgctgagtaagatcggg
aacaagtcgggggattcagccaagaaacggacagaatcatctacaccttccagaaaaagt
accaggccagtcaagaaaaagaaagtctccagtgatgatgaggaggaagaagaaagtcca
aagaaaacaaagtcaaagaggagaaacattgcagaaaaaccaagtgaaagcgaagatgag
gaggagggtccagaaacaacaaagaaaggaagctccaagaaatcaaaaccaccaaccaaa
aagaccaagaaacaagaagagcagggttccagtgatgatgacctacctctgaagaattca
caaacggcaaaaaacgccaaagcgaagactgaggaggaggctgcaagcgatgaggatgat
cagggcaggaggaggagtgccagggtgaggaatatgaggaagaagaaggacccgaccccg
gagccttccagttttgaggaggacaatgtggacaccgagtttgaggtgggctccgaggag
gaaacgtccgacgatgaattcactcccaccaaaggacgcaatgctcaaagacaggaggct
cgcaaacgccagttagaggaggataaagcagaggaggagattccaaatgacacaccctgc
tgtaaatgtcagaaaacccaccaaccagaatggttgctgctgtgtgacaagtgtgatgcg
gcgttccacacagcctgtctccgcccccctctgatgatcatccccgacggagactggtac
tgcccaccctgtgaacacaaatccttggtgtcaaggctacaagaaaatttgaaagatttg
gatacaaaccttaaaaagcatgaaagaatcatcaagaggaagcagagattggcatatgtt
ggaattagcttggataacattctcaaagaggaatacaaggaaaagaaagaaaacatagct
cctgatgaagaagaatatgagagcgaagaaagccagaagagttttaaccctaagcccagg
aagagtaaatacatcaagcgtacgtgtcggcagagaaacacgatcagctacaagtttgag
gactttgacgacatgattgacaaggccatcaaacaggaggtcgaggaggtcaaggagtat
aagaaacataattatggacgaagtaggggcaaagacatggccaacatctatgaagctgag
ggtcgggaatacataccttctgacgaagaaaaattagataaaccaccaccagtagttaac
aggaaaaagcgaactcgccgtctgacaacattggacagtgatgatgatgatgatcaggga
gaggaaagcgaagagttccatttatctgatgagactgtttctgaagttcctgaagaagat
caggaagatactgaagatgaggaagagatatccgactacagcgaagatggagagggctgg
aggtcaggtcgaaggtcaactcgaaaaccaaccaggagaagttctcggaaaagaggacgc
cactccatatttaaagactttgtggttgatgaagatgaagacagtgaggagaataggcga
acagcgaggagatctgctcgtaagagagtgacgtaccgcgatccatcgagcgaggaggaa
gctgagactgaggagacagaggaggaaagctttgacagcgatgacctgtgttctgaggac
agcgactccaaaaacaagaagagcaaaaagaaaatggaaattgcaaagaagaaaaagaaa
ctggaaacttcatcggaaacagagcaagaaagtgaagggtccgttgtgaaaaagaaatcc
aagtcctcttcgaagaaaaaggcgaaaaagaaagtagaggaaagtgaaagtgattcagag
gatgaacgcaatagacgatccagaaggaatgtgaaaaagatcgattttaagtcgttaatg
atgtctgaaactgagagtgaagatggaggaaagagcagcaagaaaaagaagaaagtttct
agtagtgagagtgcgtccagtgatgaaacagggtcagaaagtgaagagggggaagaagag
gctgtgaagaagaagaagaagaatgtaatccgagatgaatcttcagggacggatgaatat
gaacctgaagacaaaaacagtaaactagaggagaaagacatagaaaaaagtgtagcagaa
gataaaacagaggaaaagactgaagagccctcggctgatagtcttgttgtgaaaagtgac
aaagaaaagatggatacaaaggctgaattgaacgtaccagacattagtgctgcacctcca
aatccatcaaatgtagttaccagtgagaattctagtattcctatgaacagaggatttgaa
gatcaagctgtacatcaaaatgtccctcctcagcagcataacatgtattcaaatttctcc
aatgtacctcaaggacctcagaacgtgggattccatccaccacagcagttcccaaaccaa
agacttccttattcgggaatggataaaccagttttccagccccagcccggcccaatgaag
agtccccctcatttacctacccctcccaatcatcctcacagtcacaatcagagacacata
tcaagtccaccccaggggatttcaagcccccctccattccctggacagaaccgaatggcc
agtccaccccatcagatgatgagtccatcacacagtcaagccccacctcacagtcagatg
aatcctcgcatgtcctacccctccccccagcatgggccccgtccaggagatccccagaat
tttcctaacagcccacccccagttccgtcatcccagggcacgccgatgcaatttgatccc
agaatgcatcagaacaggatgccaatggactacagaggaccacatccaaggatgctaaac
aactccaacaacccatattctcagtatggaaatcttccacctggacctcaagccatgaac
tttcagaatcagatgagaatgcatggttcggttccgtcaagaatggaaggtcctggacaa
atggatcctgtaagctcttccccaggaggaccattgacgtcactaggacagatggtagtt
cctggataccagggcccctcacagcaaataccaagaccaggcggtccaccgaattccatg
aatatgggtatgccaagacacaacatgcccccaattcagcaatcacctcacagcatacca
cagagttcagccagtcagaatgcagggatgttatccaatactcaaggacaacacatgcct
tcaaatatgatgatgcaaaacatgccaccttcttcttcgagttcccaatcagttggattt
aatgtaccaagtaaagggatgccaccctcttatccaggacaaacaccagctttaagtaat
tccagtcaaagcacaactcctccggcttctgatgctcccaaagctggatcaaagaggggc
agacctaaaggcagcaaaagcaaaaagaagaaagatgcagcagcagagaatgaatcttcc
aaatctcctggatcatctccgcaaatagatgctccaaagtttccatttcctattcccccc
aatggagaaatggatcagagacaaatgcatcctgctggtgtccctgaaaacttgcaaaga
cccatgatgcccggccatgaaaacagggtaaggccttctccatatattggtagaaatgaa
gctattcaaggtcatccggtcagtcatgcacccccaccaccgcaaccatcccaaccacca
agtgactcaagcagtagacctccagatccaaaggtgcagtccaccgaagacaagcaacgg
ttaaaagacaatgataaacataaaagacctccagaaaatgacacacagaaaaagcctgtg
gaagaagctaagtcaaatccaagtagtgatgataaacagaaacccattttgagtgaaggc
agcatgaaacagggtgttgaaattgagacaggtggtcgacagactggtaaagaaatgatg
catcgacccccaatgggtgctgtgggtcagagaccacttgggccagagatgggtcatcaa
attccgggcccagatatgggtcagagacccatgattcctccctccagccagatgggtcag
catcccatgccgccacagttcagtgatatgagtcaaagaatgatgcatcctggtatgatg
ccgcccagaatgatggactcaagaggtatgcccatgcttccacatggacacccaatgaga
gcacccatgtcttatccgggcttcccttacaacagggatcagtatggaataaatgggcac
ccagcgtctattcactcttctatgcaggaccagagcagtttttctagcatgaatccagca
atgatgagctcccctcatcagaacccaatgatgcaccccagccatgtttctccgtctatg
ggaggggggcgtggattcatgattgataatctgttggagaaaaaccaaaaatcagccatg
tcctctttctctgaaaatttggaggagggagcctctactccggcagaaagcaaaggggac
tcctctcaaatagagcaggaatatggaccagcttaccaaggtgaccaggaggaagaaggg
gtatcagacattgctgacattgtcaaatgtttcaaagcatag
DBGET
integrated database retrieval system
