Magallana gigas (Pacific oyster): 105335897
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Entry
105335897 CDS
T03920
Name
(RefSeq) DNA excision repair protein ERCC-6-like isoform X3
KO
K20093
DNA excision repair protein ERCC-6-like [EC:5.6.2.-]
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
crg03036
]
105335897
Chromosome and associated proteins [BR:
crg03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
105335897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
TPR_2
TPR_1
ResIII
AAA_34
ORF29
Motif
Other DBs
NCBI-GeneID:
105335897
NCBI-ProteinID:
XP_011438340
LinkDB
All DBs
Position
3:41633014..41658874
Genome browser
AA seq
1921 aa
AA seq
DB search
MEDDTCHGLHNLSISEESTLAQCIQEKYSRLILQSKELVSGGKVREALELNQKAYRLCPS
DKLLRKIQRMQTYVKENSTDTQKEDETSEPAKNPTAISSRKERASSSSPSNGVLPPKRHP
SSVSADTSGVSSPSVQAEQNLSEEDQVRYAMLISEAKQRVEEKNIPQALYLNKQALKILP
SEKLQRKIQRMQAYMQQNNLTEVSDGLDEPSKETSLECRTGSTSSSSASEDKPDMDEGED
DQAEFARLVSEARDLTSKGQVKEALGMYKEAHKISPSDKLSRKMERMEEYLKQNECTSEN
VDTKDAEKEQSVESSRPKEMTESDEGTENQFKQLVSRARDLTAEGHVKEALSLYRLAADI
QPSDKLSRKMQRMEEYLRENGIPVDDNSSKGETLDTEMECDKPVQTSDHIAPPQHSPTSQ
DRAPPLGTTPLQDRAPPPGTTPLQGRALPSSTDVTSLSEDDQIQFATLVSKAKEQMLQGE
AAGALQSYRQASQIYPSNKLQAKILKLQNFLKESQTSQETSNVNIANSPRRIKENTPVRR
PSGNGQSGALSVDQQRKYNELVMKAKRLATDGMIKEALECNKKALKICFSDKLEKRIQKM
ESYLASNDDEEEGENGGMVPLGKGFYLYKDLEKNLYAHQKQGVLWMWGLHQKRKGGILGD
DMGLGKTIQVISFLSGLFDMEKVHSVLIVMPVSVIGNWEKEFGKWAPGIKVESYHGSKKE
KERSLAKIRRKGGVLLTSYGLVVTSWEMMSQQDGRPFRWDYLILDEGHKIKNPTKTTKGV
HQIPAGHRILLTGTPIQNNLREMWSLFDFVHQGTLLGTARTFKMEYENPITRARERDATA
NERRLGMEMAESLKQIISPYFLRRTKAEVTDNEAREGQNSSSSTRTLKMPTMTRKNDFII
WLFLTPDQQRIYGDFLSLDTVKELLMTKKSPLVALTVLKKICDHPRLLSRRACAQLGLDG
EHGLNDSALESEEGYQCAANQIKNMPDNVLIQESGKLIVIMDLLDQMKREGHRCLVFSQS
RKMLDIIHQLITNRGHKVMRLDGTITQLSERDKRIATFQEDMSYSVFLLTTQVGGVGLTL
TAADRVIIYDPSWNPATDAQAVDRVFRIGQDKNVVIYRLITCGTVEEKIYRRQIFKDSIT
RQTTGNTKNPYRYFTKEELKELFTLDNPRVSKTQQQLEEMHSQQRKTDSSLDAHIAFLYS
LDIFGISDHDLMFTQEKCDFEDEGEAEVDPGTDYIQHRVQKAKELLQMESDLTQDFEQRA
GKYPRNVPSGPEESGSQKPFSRPWGDWNLQGTVNTQEEGEEDVKDVQEIDLDAENDSEED
EEGEEEQDLREVKREVVDTSRIDLVTPDPTPVKATKVVDLTSSSTKPGARVKLEQESPKI
EMESESYDRKEIKMEVLSPDHHSEKAEESDDEVQAIENIQNLSIQGSPKGTPRHGNDNEM
LQHKTDIKDLSSSSHADVIQVDKLEETMEDRENINDESVVKETGSDQMEEIVVDSEDEEN
KENVPLSQILASAKRSSDSFKLNRSIDGQPRSPLAPIILSPVVTDSPAKKKPRRSVSASP
WLRNSPVKRVEKVVKEEQVFISPDRFRPLMGTTPKGFSDRVRSGSNLNSTILSAFSESPQ
VARKELDMDSPLNGKRTTSRLQETLVEESPDRQGLSAGLHSSFVPNSLENTPSVTPSNDI
SRNKSIAIEETDEESSPLKSVSISRNESVMEFSVLSDDGQLEEVRDSDPEQSLVEIDSDN
SLPCLSVKKKHFRKAVIVSDSESDAEDLRTENEDVEEAVGSDQSENRKKRKSSESSSLPQ
SKYVMLSSSDNEQSEEQENIKSEEEEEDDDLMSDDHDEEQEEEEEEEDSIDIDVDSEDED
FQELSEESKEQYRVATQRAKELYKSSEYEQCLGCILQALEIYPENTALQAFALQVHAKKE
G
NT seq
5766 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgacacctgccatgggttacacaacttgtccattagtgaggaaagtacactt
gcccagtgtattcaagagaagtactcccgactaattctacaatcaaaggagttagtttct
gggggaaaagttagagaagctttagagttaaatcagaaggcctataggttgtgtccctcg
gacaaactactcagaaaaatccagcgtatgcagacatatgtgaaagaaaattctactgat
actcaaaaggaagatgagaccagtgaaccagccaaaaatccaacagctatttcatcaaga
aaagaaagggcatcttcaagttcaccaagcaatggagttttgcctccaaaaagacacccc
tcctctgtctctgctgacacctcaggtgtttcctccccctcagtacaggccgagcaaaac
ctgtccgaggaagaccaggtcaggtatgctatgttgatatcagaagccaaacaaagagtg
gaggaaaagaacatcccccaggctctgtatctcaacaagcaggccttgaagatcttaccc
agcgaaaaactgcagcgaaagattcagcgcatgcaggcatatatgcaacagaataattta
actgaagtttcagatggtttggatgaacccagtaaagagacatcactagaatgcagaaca
ggttccacttcatcatcatcagcatcagaagataaaccagacatggatgagggggaagat
gatcaagctgaatttgccagactggtctctgaggccagggatttgacatcaaaaggtcaa
gtgaaagaggccctaggaatgtacaaagaagcacacaaaatcagtcccagtgataaactg
agtcgaaagatggagagaatggaggaatacttaaaacagaatgagtgtacgagtgaaaat
gttgacacaaaggacgcagagaaagagcaatcagtggagtcatcccgtcccaaagaaatg
acagagagtgacgaggggacagagaaccagtttaaacagctggtctcccgagccagggac
ctgacggcagaaggacacgtgaaggaagctttgagtttgtatcggctagcagcggacatc
cagccaagtgacaaactatcccgtaaaatgcaaagaatggaggagtatttaagagaaaat
ggaattccagttgatgataattcaagtaaaggagagactttagatacagaaatggaatgt
gacaaaccagtacaaacatctgaccacattgctcctcctcaacacagccccacttcacaa
gaccgagcccctcccctaggaaccaccccactacaagaccgagcccctcctccaggaacc
accccacttcaaggccgtgcccttccctcctccacggatgtcacaagtcttagtgaggat
gaccagatccagtttgccaccctggtgtctaaagccaaggaacagatgttgcagggagag
gcagccggggcgctacagtcctacagacaagcctcccagatctaccccagcaacaaacta
caggccaagatcctcaagttacagaattttctgaaagaatcacagacttcacaggaaacc
agtaatgtgaacattgcaaattccccaagaagaatcaaagagaacactcctgtcagaaga
ccgtccggaaacggccaatcaggagctctgtctgtggaccaacagcgcaaatataatgag
cttgtgatgaaggcgaaaaggctggccacagatggaatgatcaaagaggccctggagtgc
aataaaaaagccctaaaaatctgcttcagtgacaagcttgaaaagagaatacaaaaaatg
gagtcctaccttgctagtaatgatgatgaagaggagggtgagaatggaggaatggttccc
ctggggaagggcttctacctgtacaaggacctggagaagaacctgtatgcccaccagaag
cagggggtgctgtggatgtgggggcttcatcagaagcgtaagggagggatacttggtgac
gacatggggttgggtaagacgattcaggtgatatcgttcctgtcggggctgtttgacatg
gagaaagtccactccgtgctgatcgtaatgccagtatctgtcatcgggaactgggaaaag
gagtttgggaaatgggcaccaggcattaaagtggaatcatatcacgggtcaaagaaagaa
aaggagcgatcattggccaagattcgaaggaagggaggagtgttactgacctcgtatgga
ttggtggtgaccagctgggagatgatgagtcagcaggatgggcggcccttcagatgggat
tacttgattctagatgagggtcacaagataaagaaccccacaaagacaacgaagggggtc
catcagatccctgccggtcaccgaatcctgctgactggtacccccatacagaacaacctc
agggaaatgtggtccctatttgactttgttcatcaaggaactttactaggcactgcgaga
acctttaagatggagtatgagaacccaataaccagggcaagggagcgagatgccacagcc
aatgagagaagacttggaatggaaatggcggaaagcttaaaacagattatctccccttat
ttcttacggaggaccaaggctgaagttactgacaatgaggccagggagggacagaattcc
tcctcatcaacccggaccttgaaaatgccgaccatgactcgtaagaatgacttcatcatc
tggctgttcctgaccccggaccaacagaggatatacggagacttcctgtccctggatacc
gtcaaagagctgctgatgaccaagaaatctcctctggtggcgctgactgtccttaagaag
atctgtgaccacccccgcctactgtctaggagagcctgcgcccagctggggctggatgga
gaacatggcttgaatgactcggccctggagtctgaggagggttatcagtgtgcggccaat
cagatcaaaaacatgccggacaacgtcctgatccaggagtccgggaaactgatcgtcatc
atggacctgctggaccagatgaagcgggagggacaccgctgtctggtgttctctcagtcc
aggaaaatgctggacattatccatcagctgatcaccaacaggggacacaaagtcatgaga
ctggacggaaccattactcagctgagcgagagagacaaacgaatcgccacgtttcaggag
gacatgagttactcagtgtttcttctgacaactcaagtgggaggcgttggcctgaccttg
acagctgctgaccgagtcatcatttatgaccccagctggaatccggccaccgatgctcag
gctgtggacagagtgttcaggatcgggcaggataaaaatgttgtcatctatcgcctcatc
acttgtggaactgtggaggagaaaatataccgcagacagatattcaaggactccatcaca
cgccagactaccggcaataccaagaacccctacaggtatttcacaaaagaagagctgaag
gagttgtttaccctggacaacccgcgggtctccaagacccagcaacaactggaggagatg
cacagccagcagaggaagaccgactcctccctggacgctcacatcgcatttctgtactca
cttgatatctttgggatcagtgaccatgacctgatgtttactcaggagaagtgtgacttt
gaggacgagggtgaggctgaagtggaccctgggacagactacatacagcacagagtacaa
aaggccaaggagttgctacagatggagtcagatttgacgcaagattttgaacaaagagct
ggtaaatatccaagaaatgttccatcgggaccagaggagtcagggtctcagaaaccattc
tcccgcccctggggagactggaacctccagggcactgtcaacacacaggaagagggggag
gaggatgtcaaggatgtacaagagattgaccttgatgcagaaaatgacagtgaggaggat
gaagaaggagaagaagagcaagatttaagggaagtgaagagggaggtggtggacaccagt
cgtattgaccttgtgactcctgacccgaccccagtcaaagcaaccaaagtggtggatcta
acatcttcttccactaaacctggtgcgagagtgaagttagaacaagaatcacctaagatt
gaaatggagagtgagagttatgataggaaagaaatcaagatggaggttttgagtccagat
catcattcagaaaaggctgaagaatcagatgatgaagtacaggctattgaaaatatacaa
aatttgtctattcaagggagtccaaaaggcactcctaggcacggaaatgacaatgaaatg
ttacaacataaaacagacattaaagatttgagctccagttctcatgcagatgttattcag
gttgataaactggaagagacaatggaggacagagaaaatatcaatgatgaatctgttgtc
aaggaaacaggtagtgatcaaatggaggagatagttgttgattcagaagatgaggaaaat
aaagaaaatgttcctctttcacagattcttgcatcagccaaaagatcgtctgatagtttt
aaacttaacagatccatcgatggccagccaagatcacctctagctccaatcattttatcc
ccggtggtaactgactcacctgccaaaaagaaaccaagaagaagtgtatctgcaagtccc
tggctgagaaactcaccagtgaaaagagtggaaaaagttgtaaaagaagagcaagtattt
atatcacctgacagattcaggccattaatgggaacaacaccaaaaggcttcagtgacagg
gttagaagtgggagtaacttgaattccaccatcctatcagctttctctgagagtccacag
gtggcaaggaaggagttggacatggactcaccattaaatggaaagaggaccacttccagg
ctgcaggagactctggttgaggaatctccagatcgtcaaggtctctcagcaggacttcat
tcaagttttgttccaaattctttagaaaacacacccagtgttactccttccaatgacatt
tcaagaaataaaagtatagctattgaggaaacagatgaggaatcttcaccattaaaatca
gtgtccatctccagaaatgagagtgtcatggaattcagtgtcctgagtgatgatggacag
ttggaggaagtgcgtgacagtgaccctgaacagtcccttgtggagatagactctgacaat
agtttaccgtgtctttctgtaaaaaagaagcattttagaaaagctgttattgtgagtgat
tcagagagtgatgctgaggatttgaggacagagaatgaggatgtggaggaagcagtagga
agtgatcaaagtgagaacaggaagaagaggaagtcctcggagtccagcagtttgccacag
tccaagtatgtgatgttatccagctctgacaacgaacaatctgaggagcaggagaacata
aagagtgaggaggaggaggaggacgacgacttgatgagtgatgatcatgatgaggaacag
gaggaggaggaggaggaagaggactcaatagacattgatgtagatagtgaggatgaagat
tttcaagaactttctgaagaatcaaaagagcagtatcgtgttgctacacagagagcaaag
gaattgtacaagtccagtgaatatgaacagtgcctgggatgtatcttacaagctttagaa
atataccccgaaaacacagcgttgcaggctttcgctcttcaggtgcatgccaagaaagaa
ggttaa
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