Magallana gigas (Pacific oyster): 105336007
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Entry
105336007 CDS
T03920
Name
(RefSeq) tumor susceptibility gene 101 protein
KO
K12183
ESCRT-I complex subunit TSG101
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03250
Viral life cycle - HIV-1
crg03272
Virion - Hepatitis viruses
crg04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
105336007
03272 Virion - Hepatitis viruses
105336007
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105336007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105336007
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crg04147
]
105336007
Membrane trafficking [BR:
crg04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
105336007
Exosome [BR:
crg04147
]
Exosomal proteins
Proteins found in most exosomes
105336007
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UEV
Vps23_core
SSNA1
HmpF
DUF3740
DUF3987
MinC_C
FapA
Tautomerase_2
STB2_C
Motif
Other DBs
NCBI-GeneID:
105336007
NCBI-ProteinID:
XP_065928623
LinkDB
All DBs
Position
9:48236341..48246893
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AA seq
432 aa
AA seq
DB search
MAGPDQVLKQALSKYKYADIARRDVTNAMTQFKDLRPSHDSFIFNDGNRKELLNLDGTIP
VTYKGSIYNIPIGIWILDTHPYNPPMVFVKPTSAMQIKPGRNVDTNGKVDLPYLRDWRYP
QSDLLGLIQILVIVFGEEPPVFSRQSQMAQSRPPYPGTSQYPGQAPYPMQGSGFPMPMPD
SMNQPPGYSQYPSSSTQYGGSGFSGYPGPASSGYPGYPTQNYPLQYPSSTNQYGGGSNLP
YPQYTTPGTNTVTSSAQPGSTSTVTEEHLRMSLLSAVEDKMKRRLREMFEQAQAEMNVLH
KTQADLVKGKEKLEVMVKELENEKVEIENNIKLLQDKDQEVKEVLQKLDNQDKLDIDEAV
VTTTPLYRQLLNSFAEEQAIEDAIYYLGEALRKDVIDLDVFLKQVRELSRKQFFLRALIQ
KCREKAGLPPMA
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggccgggccagatcaagttttgaagcaggctttgagtaagtacaagtacgcagacatt
gctaggagagatgtgacaaatgctatgacccagttcaaagatttacggccgagccatgac
tcgtttatatttaatgatggcaacagaaaagaactcctgaacttggatggcaccatacct
gtcacatataaaggtagtatttacaacattcccatcggtatctggatcctggacacccac
ccctataaccctcccatggtgtttgtcaaaccaaccagtgcaatgcagatcaagccgggg
agaaatgtggacaccaacgggaaggtagacctaccatacctacgtgactggcgatatccc
cagtcggatctgttgggactgatacagattctggttattgtgtttggagaggaaccccca
gtgttctctaggcaatctcagatggcccagtcccgacccccctaccccgggaccagccag
tatcctggtcaggccccctacccgatgcaagggagcggtttccccatgcccatgcctgac
agtatgaatcagcccccaggatattcccagtaccccagcagcagtactcaatacgggggg
tcagggttctccggatatcctgggccagcgtcttcagggtatcctggctaccccacccag
aattaccccctacagtacccctctagtaccaaccaatatggaggaggatcaaaccttccc
tacccacaatacaccactccaggaactaacacagtgacatctagtgctcagcctgggagt
accagcacagtgacagaggaacatctccggatgtccctgctctcggccgtcgaagacaaa
atgaaaaggaggcttcgagaaatgtttgaacaagcacaggcagagatgaacgttctacac
aaaacacaggctgaccttgtcaagggcaaagagaagctggaggtcatggtcaaagagctg
gaaaatgaaaaggtggagatagaaaacaacatcaaactcttacaagacaaagatcaggag
gtgaaggaagtcctacagaagcttgacaaccaagacaaactggacatagatgaggccgtt
gtgacaactaccccactgtacagacaactactgaactccttcgccgaggagcaggctata
gaggacgctatctactatctgggcgaggcactccgtaaggatgtcattgaccttgacgtc
ttcctcaagcaagtacgagagttatctaggaaacaattcttcttaagagccttgatacag
aaatgtcgagagaaagcaggacttcctccaatggcatga
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