KEGG   Magallana gigas (Pacific oyster): 105336036
Entry
105336036         CDS       T03920                                 
Name
(RefSeq) U6 snRNA phosphodiesterase isoform X1
  KO
K23093  U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
crg  Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:crg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:crg03041]
    105336036
Spliceosome [BR:crg03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    105336036
SSDB
Motif
Pfam: HVSL 2_5_RNA_ligase2 SCD IMS_C
Other DBs
NCBI-GeneID: 105336036
NCBI-ProteinID: XP_011438511
UniProt: K1S652
LinkDB
Position
LG6:43340395..43343267
AA seq 275 aa
MNCLVQYSDSEDELSDKEDPDYIGMKRKNPTNFKVCTENNKKLRSGEILPLPDSIKTLFS
SGKKREDNPEVHEGRIRSFEHLEGNWATHVGVSYDPDERMIELIDELLKCLRPLEFKPMK
DLHLSLSRTVAIRHHWIQPLTDRLQRRFKMLPKTCCEISSVKLYTNDEKTRTFLSLTVSA
PGDILQQYTKAVDECFEEYKLPKYYENPSFHISIGWCLKDVIPQISEETLNKLQDLVDNA
MEEYPELRLFAVEEAICKSGNKQFPLPLSDFTGDG
NT seq 828 nt   +upstreamnt  +downstreamnt
atgaactgtctagtgcagtactcagacagcgaagatgaattatccgataaggaagatcca
gattatataggaatgaagcgaaaaaacccaacgaacttcaaagtttgcacagaaaataat
aagaagttgaggtcaggtgaaattctacccctcccagattcaataaaaactttattttcc
tctggaaaaaaacgtgaagacaatcccgaggttcatgagggaagaattcgatcttttgaa
catttggaaggaaactgggctacacacgttggcgtttcatatgatcccgatgaaagaatg
attgagttgattgatgaactattgaaatgcctgaggccacttgaatttaaaccaatgaaa
gatcttcatttgagtttgtcaagaaccgttgccattcgtcatcactggattcagccactg
acagatagactgcaaagaagatttaaaatgctaccaaaaacatgctgtgaaatttcttct
gtgaagctgtatacaaatgatgaaaaaacaaggacctttttgtcactgactgtctctgca
cctggagatattctacagcaatacacaaaagctgttgatgagtgctttgaggaatacaaa
ttaccaaagtactatgagaatccctccttccacattagcataggctggtgtcttaaagat
gtcatccctcagattagtgaagaaacactgaacaaattgcaggatttagttgataatgca
atggaagaatatccagaattacggctattcgccgtagaggaggccatttgtaaatcagga
aacaaacaattccctctgccactgtccgatttcacaggagatggatga

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