Magallana gigas (Pacific oyster): 105336317
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Entry
105336317 CDS
T03920
Name
(RefSeq) transcription initiation factor TFIID subunit 7 isoform X1
KO
K03132
transcription initiation factor TFIID subunit 7
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105336317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crg03021
]
105336317
03036 Chromosome and associated proteins [BR:
crg03036
]
105336317
Transcription machinery [BR:
crg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105336317
Coactivators
SAGA/TFTC/STAGA complex
105336317
Chromosome and associated proteins [BR:
crg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
105336317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAFII55_N
GemA
Motif
Other DBs
NCBI-GeneID:
105336317
NCBI-ProteinID:
XP_011438872
LinkDB
All DBs
Position
2:11330109..11363023
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AA seq
338 aa
AA seq
DB search
MSSKKKETTSEPAFDLEQQFILRLPPGPAMALKQDIQSSSNTLKDRLSIEMQPDYRHANV
RYGNQIFHGKMVDMPCIVETLKTVDMKTFYKTADLCQMLICKSDDDTSQDENESPKKKEK
DKKYLWTHGITRPLKNVRKRRFRKTLKKKYMEQPDIEKEVKRLFRTDADAIDVKWEVITE
EEKPESSGQMTVSKSKGSSLKRTDTSTSLDNYAIFGDLSSSDEEEEKDINIMDSGEDDMS
RLSFSQQHMSFDSMDSSNVEGQYASTDADNAELQGKLSELKRQVAEIRQRRASQEQSESN
ITDPEQKEKAQALLKKIIQQENEKLQEYEILSSMLSQS
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcaaaaaagaaagaaacgactagtgaaccagcatttgatctcgaacaacagttt
attttaagactccctcctggacctgcaatggcactaaaacaggacattcaatcttcatct
aacacactgaaggacagactgagtatagaaatgcagcctgactatagacatgcaaatgtc
agatatggaaatcagatttttcatggaaagatggttgatatgccatgcattgtcgaaaca
ctcaaaacagttgacatgaagacattttataaaacagctgatctttgtcagatgttgata
tgcaaatctgatgatgacacaagtcaagatgaaaacgagagtccgaagaaaaaggagaaa
gataaaaaatacttatggactcacggcattacaaggccgttaaagaatgtcaggaaaaga
aggtttagaaaaactctaaagaaaaagtacatggagcaacctgatattgagaaagaagtg
aagcgattatttcgtactgatgctgatgccattgatgttaaatgggaggtgatcacagag
gaagagaagcctgaatcttccggacaaatgacggtcagcaagtccaaaggctccagctta
aagaggacagacacttccaccagtctggataactatgccatttttggagacctcagtagc
tcagatgaggaagaagaaaaggatataaacattatggatagtggagaggatgacatgtct
agactctcgttctctcaacaacacatgagttttgacagcatggattcctccaatgtcgag
gggcagtatgccagcacagatgctgacaatgctgagctacagggcaaattgagcgagctg
aagagacaggtggcagaaataaggcagaggcgcgcatcccaggaacagagtgaatccaac
ataacagaccccgagcaaaaggaaaaagctcaagctcttttgaaaaagataatccaacag
gaaaatgagaaactacaagagtatgaaatactgtcttcaatgttgtcgcagtcctga
DBGET
integrated database retrieval system
