Magallana gigas (Pacific oyster): 105336381
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Entry
105336381 CDS
T03920
Name
(RefSeq) protocadherin gamma-A11
KO
K16498
protocadherin delta 1
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
105336381
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
crg01009
]
105336381
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
crg04515
]
105336381
Protein phosphatases and associated proteins [BR:
crg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105336381
Cell adhesion molecules [BR:
crg04515
]
Cadherins
Protocadherins
105336381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Cadherin_2
TMEM154
Motif
Other DBs
NCBI-GeneID:
105336381
NCBI-ProteinID:
XP_065932948
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Position
2:complement(47349606..47361563)
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AA seq
1155 aa
AA seq
DB search
MNKVIIMKVPEVLLMICFIRTLRGQETEELNYKILEEQMPSTFVGNIANDSNIRNEVTPV
MLKQLKFQIWNGGNTAYDKLFRIIESTGRLETAKLIDREEVCQPTSSCILSLGVAVFKPD
NELLKVIKVLVTVDDINDNFPAFPQPSISLQISESSDIGHTLLTSTAHDGDSESQNSALT
YQLLSGGNTFSVRTVPDVDSRENLEIVVEKKLDREVQDFYQLVIVAKDSGSPQRNGTLHV
NITVLDSNDNAPSFLNNTYNITVQEDQAKGTVIINLSAEDDDIGDNGRVTYEFSSRTSSQ
VKDAFLLNETTGEIKISSPLDYEQETKYQFVVIARDNGRTSLSTQVIVNITVLDINDNAP
QININLPPGGTGVVENAEIGQYIATVVVTDSDGGENGTVNCTISNENFNIVKMFSNIFKI
TLGSRLDRERVPEHNVTINCFDFGKPPKTNKTFFYVKVSDVNDNVPVFSQNIYEADFPEN
NNIGDMVVHVTATDKDEGENGQVTYKFKTLQSYFAINPTSGIISANHIFDRENLSDLTFQ
VIASDNGVNGQKFTSTATVVVRITDKNDEYPIFSRNRYDIIVPEEQPISKPIEQFSAVDK
DIGGNGQFYFRIEEGYSNVFTIDATGSLKTKILLDREKKEEYHFQISVIDRGTPALTSTA
NISLYLKDINDNPPQVYYPNDRNNSISLSLQSVPKTIIARVIANDTDKGVNAHLTYSIIQ
GNVVKLFSIDNQTGVIRLERVPVEEEAGTYNLVIAVTDSGVPSKTNWTHLVIIVGEKSNS
QNLIIVIVVCSVTMVISLALIMIICIIRKRDNEKYKDKGNQFKTPHKSILKKCLFCFDFE
KESKLSTTTENNNKYSESSHMPSDDDKIYTQLVSSNKPDLTRVDSGIVEHSPPDSGHGDS
VDVGSEIYKSDMDLSSAPYSSSGFTNKSTHSLSAGHSEQDIPNNSPWHQKPRVTFSDFQR
NISLDEQALRRNPKPPIYFARFRSSSESEHLSKDSSTSQDKIDLSHSSSFKHNNIDLSQS
YSGPFFSKSLDRNNKNIHFARARPKLSHQTSRSAVRRELPTISASPDPYDPIQELTEISY
QDTNPYRHHHDNSYFRDQSSFNGSQSQISQDPSLDYKGKITLGDNQSQHSNDTTLASFAI
NPSNFDSVINTDIVV
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgaataaggtcatcatcatgaaggtgcctgaggtcctactgatgatctgcttcatcaga
actcttcgtggacaggagacagaggagctcaactacaagatcctagaggagcagatgccc
tcgacctttgtaggaaacatagccaatgacagcaatataagaaacgaagtgacgcccgtg
atgctgaagcagctgaaatttcagatctggaatggtggaaatactgcatacgacaagttg
ttccgcatcattgaatccacaggtcgtctcgaaacggcaaaacttatcgaccgagaagag
gtatgccagcccaccagcagctgtatcctaagtctgggagtggcagtttttaagccagac
aatgagttgctgaaagtgattaaggtgcttgtgacagtggatgacatcaatgataacttc
cccgcctttcctcagccatccatatccctgcagatctcagaatccagtgacattggtcac
actcttctgaccagcaccgcccatgatggggacagcgagagtcagaactcggccttgacc
taccagcttctgtctggagggaacaccttcagcgtccggactgttccagatgtggactcc
agagaaaatctggagattgtggtagagaaaaaactggacagagaagtacaagatttttat
cagttagtgattgtggccaaagattctggaagtccacaaagaaacggaactctgcatgta
aatatcacagtgctggattccaatgacaatgctccaagcttcctcaataacacttacaat
ataacggtacaagaggaccaagctaagggaacagtaataatcaatctatctgcagaagat
gatgatattggtgataacggcagggttacttatgagttcagctctcggacatcttcacaa
gtcaaagatgcttttctgttaaatgagacaacaggagaaattaagatcagcagtcctttg
gattatgagcaggaaaccaagtaccagtttgttgtaattgcaagagacaacggcagaacc
tccctgtcaacacaagtcattgtcaacatcacagtgttggacatcaacgacaacgcacca
cagatcaacatcaacctgccaccagggggcactggggtggtggagaatgcggagattggt
cagtatatagccactgtggttgtaactgattcggatggaggtgaaaatggaactgtcaat
tgtaccatctctaacgaaaactttaacattgtgaaaatgttctcaaacatattcaaaatt
acattgggtagtcggttggacagagaaagagtacctgagcataatgtgaccatcaactgt
tttgactttggaaaacctcccaaaactaacaagactttcttctatgttaaagtcagtgat
gttaatgataatgttcctgtgtttagccaaaacatttacgaagctgattttccagaaaac
aacaacattggtgatatggtggttcatgttactgctacggacaaagatgaaggcgaaaat
ggccaggttacctacaagtttaaaactcttcagtcatattttgctatcaatcctacgtct
ggaataatctcggcaaatcatatttttgatagagaaaacctgtctgatttaacttttcaa
gttatcgcaagtgataatggcgtcaatggacaaaagttcacatctactgcaacagttgtt
gttagaattacagacaaaaatgatgaatatccaattttctccaggaatagatatgatatt
attgtccctgaagaacaacctatatctaaacccattgaacagttttcagctgtggacaaa
gacattggaggaaatggtcagttctatttccgaattgaagaaggatattcaaatgtcttt
acaattgatgccactggaagtctaaaaacaaaaatcctcctagatagagagaaaaaagag
gaataccattttcaaatctctgtgattgacagaggtacaccagccctaactagtactgct
aatatatccctctacctgaaagacattaatgataatccaccccaagtttactatcccaat
gatcggaacaactcaatttcgctatccctccagtcagtacctaagactatcatcgccaga
gtgatcgcaaatgacacagacaagggagtcaatgcccacctgacctacagcattattcag
ggaaatgttgtcaagttgttctccatagacaaccaaaccggtgtcatcagactcgagcga
gttcctgtggaggaggaagcggggacatacaacctcgtcattgcggtcactgattcggga
gttccttccaagacaaactggactcatctcgtcatcattgtgggagaaaaatccaattcc
cagaatctgattattgtcattgtcgtttgctctgttaccatggtaatctccctggctctg
atcatgattatttgcattatcagaaagagagacaatgaaaagtacaaggacaaggggaac
cagtttaaaacgccacacaaaagcatcctcaaaaaatgcctgttctgtttcgattttgag
aaagaatcgaaactgtcgacaacgaccgagaacaacaataagtacagcgaatcctcccat
atgccctctgatgatgacaaaatatacacacaactagtgagcagcaataagccggacctg
accagggtggacagtggcattgtggagcactcacccccagacagtggacatggggacagc
gtggatgttggcagtgaaatctacaaatctgatatggacctttcttcagctccttattct
tcatctggctttaccaacaaatccacacactccctctctgctggacactccgaacaggat
attccaaataactccccctggcatcagaagcccagagtgactttcagtgacttccagcgt
aacatcagccttgatgaacaagcgctgaggaggaatcccaaacctccgatttatttcgcc
agattcaggtccagttccgaatctgagcatttatccaaggactcgtccacgagtcaagat
aaaatagacctatctcacagctcgtcattcaagcataataacattgacttgtctcagtcc
tattctggacctttcttttcaaagagtctcgacaggaacaataaaaatattcactttgct
cgagcgagaccaaagctctcgcaccagacatctcgttctgctgtgagacgagaacttcct
acaatcagtgcttctcccgatccatatgatcctattcaagagctgactgagatctcatac
caggacaccaatccttacagacatcaccatgacaacagttatttcagggaccaatcctct
tttaatggcagccagtcccagatttcccaggatccgtcgctggactacaaagggaagata
actcttggagacaaccagtcgcagcactccaatgacaccaccctggcgagttttgccatc
aacccctcaaactttgacagtgtaatcaatactgatattgtggtttga
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integrated database retrieval system