Magallana gigas (Pacific oyster): 105336671
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Entry
105336671 CDS
T03920
Name
(RefSeq) pumilio homolog 3
KO
K14844
pumilio homology domain family member 6
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crg03019
]
105336671
03009 Ribosome biogenesis [BR:
crg03009
]
105336671
Messenger RNA biogenesis [BR:
crg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
105336671
Ribosome biogenesis [BR:
crg03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
105336671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPL
PUF
Motif
Other DBs
NCBI-GeneID:
105336671
NCBI-ProteinID:
XP_034313950
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All DBs
Position
7:34437212..34445858
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AA seq
802 aa
AA seq
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MKYKMEDSSFEEEPSRTRRRPPRSKNKKHTSMRGNPEGDSLYQKQPTKITAPPNTDNEDS
FEVHSPKKRMKKMERDVQVIERKTMKKKKSMYSDTDLSSLDVTDTPDTLSQISAIAPVSD
VSMMTTFRNPRGRHDMTWEKAVQKARGQPDGAERSFSRKKSSKVVMMYNRPEVIREVAEG
VESDKSVENIPAVANAAEEEPQPLERRKSIKVKIKRAASNAAGKLKTLKTKKQLNESRTT
LGVKKRKIDESQMEEKSETKKTKLKELPFRERKKVRKMLKNNYEAIQRSKKIWEDLRRQD
LSEGKKVALCDELLEMVKGNMKEFAFAHDTARVLQCLIQYGSPEQREVVYQEIKDQIVLM
SKSKYAKFLVKKFLVYGPKPMKNAVIKSFHGNVRKLVRHAEASDVVELAYNDYANASQRL
SLLEEFYGPSFTLFKTPDIKSLDQLLLIQPDKKEMILSNMKEALLTLIDKTILGHSMVHR
IFHEFFAHAKDKMRSDMIESIREHLVPMMHTRDGARTAMYCLWYGTSKDRKIIMKSFKSH
VAKICKDEFGYLALIALFDTVDDTKLVGKIVLEEIFKSLHDIAQNQHGRKVLQYLLCPRD
PHFFQPDLVRILKEGDNNPHSKKDTALRYKELLTMVSPPFLQYIVDHARDLVLENASLLL
VLSILNYSLGDPSEAMKAVAEIAAEPFVAGSLENQHIVEHPAGHMTLKHLIQRDRERIQA
GQPVLFSQVLLRTLKDGSLKSWAACNRGCFTLLFLLEVDHPEITDTVISQLSGIRSSLKK
MTFRGAQILLQKLDALSGEYKL
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgaaatataaaatggaagattcgtcatttgaagaagaaccatcacgaacaaggaggcgt
ccgccacgaagtaaaaataaaaagcatacaagtatgagaggaaacccggagggagacagt
ctgtatcaaaagcagccaaccaagataacagccccacctaacacagacaacgaggattcc
ttcgaagttcattcacccaaaaaacggatgaaaaaaatggagcgcgatgttcaagtcata
gagaggaagacgatgaagaaaaagaaatccatgtacagtgatacagacttgtcttcattg
gacgttaccgacacaccagataccctgagtcaaatcagtgctattgcacctgtgtcagat
gtgtccatgatgacaacatttagaaatcccaggggtcgacatgacatgacatgggagaaa
gcagtacagaaagccagagggcagcctgatggagcggagaggtcgttcagtaggaagaaa
agcagtaaagtggtgatgatgtacaacagacctgaagtgatccgagaggtggcagagggg
gtagagtcagacaagtcggtagaaaacattccagccgtggcaaatgcagcagaggaagaa
cctcagcctctagagagaagaaagtctatcaaggttaaaataaagagggcagcaagcaat
gcagctggaaaactgaagactttgaagacaaagaaacagttgaatgaaagtcgcacaaca
ctaggggtcaaaaaacgaaaaattgatgaatcacagatggaggaaaaatctgaaacaaaa
aagaccaaattgaaagaattgccatttagggaaagaaagaaagttagaaaaatgcttaaa
aataattatgaagccattcaaaggtcaaagaaaatttgggaagatcttagaagacaagac
ctatctgaaggcaagaaggttgctttgtgtgatgaattactggaaatggttaaaggaaat
atgaaagagtttgctttcgctcacgacacagcccgagtgttacagtgtttgatacagtac
gggtctccagagcaacgggaggtggtgtaccaggaaatcaaagatcaaattgttttaatg
tcaaagtccaagtacgcaaagtttcttgtgaagaaattcctggtttacgggccaaaacca
atgaaaaacgcagttatcaaaagctttcatggaaatgtgcggaagttggttagacatgct
gaagcctcagatgtagtagagttggcctacaatgattacgccaatgccagccagaggctc
tctctactggaggagttttatggacctagttttactctttttaagacaccagacatcaag
tctctagaccagctgttactgattcagccagacaagaaagaaatgattctcagcaacatg
aaggaggccctgctcacactgattgacaaaacaatattaggacattcaatggtgcacaga
atcttccatgaattctttgcccatgccaaagataaaatgcgatcagatatgattgagtcc
ataagggagcaccttgttcccatgatgcacacaagggacggagcaaggacagccatgtat
tgtttgtggtatggaacaagtaaggacagaaagatcataatgaagagtttcaaatcccat
gttgccaagatttgcaaagacgagtttggatacttggctttgattgcactgtttgacaca
gtagatgataccaaacttgtggggaaaatcgttctagaggaaatattcaagtccctgcat
gacattgctcagaaccagcatggtaggaaggtcctccagtatctgttgtgtcccagggat
ccccatttcttccagcctgacctggtccgaattttgaaggagggagacaacaacccccac
agtaagaaggacacagcactgcgttacaaggagttgctgacaatggtgtctccacctttc
ctacagtacatagttgatcatgcccgagatttagtcctggaaaatgcctcattgcttcta
gtcttgtcaattctaaactattcactaggtgatccgagtgaagccatgaaagcagtcgct
gagatagctgcagaaccattcgtagccggcagcttagagaaccagcacatcgtggagcat
ccagcaggtcacatgacactgaagcatctgatacaaagagacagggagaggatacaggcc
ggacaacctgtgctattctctcaagtgttgttgagaactctaaaagatgggtctttgaag
tcctgggcagcttgtaacagaggatgcttcaccctcttatttcttctggaagtggatcat
ccggaaataacagacacagtcattagccagctctctggaatcaggagttcactgaagaaa
atgacatttagaggagctcagatcctgttacagaagttagacgcattaagcggggaatat
aaactgtag
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