Magallana gigas (Pacific oyster): 105336694
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Entry
105336694 CDS
T03920
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
crg04054
]
105336694
Pattern recognition receptors [BR:
crg04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
105336694
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_14
TIR_2
LRR_EndoS
LRR_1
LRR_6
Motif
Other DBs
NCBI-GeneID:
105336694
NCBI-ProteinID:
XP_019926358
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Position
2:complement(33949887..33952598)
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AA seq
739 aa
AA seq
DB search
MNRTLILLLAFVLVYESVHPKPCERNEKPPVGCTCTKYKGKQYYVTIKCVNKGESPRRDT
IPSMPNNTYQLIIQGFRFINLTMKTFGNLRRLSSLQVLNLLDNNIITISHDALSELKHLK
ELEISNEIQVNRREISEMLSYITRNITFIRFSHNAWDQPPDFAGLWNATLQNLTLSYNYL
TALEGSNFSSLNQLRKLDVSYNGITENGVNFTGLENINELVLDGNWFKEFPKFCDYKFSN
LSTISFKNNKLTEFRSSYFQCLTNLQALNLNGHAIRKLYNNTFANLTSLRQLYIQRLAGQ
LSHIEPEAFKSNSLQELRFSYNGFFFSDFPKETLIMFKYCPKLTLLDISANHLKLKENEL
TKMIKNLNNLTTLIIRNTGLHYLPGNLTRHLPMLRKLDASDNYLNGSWDGNSVFGNVPSL
QYLDLSDNNIERITEHNFPLTLLNGLDEGGLDLSYNKLSCNCDDALWFYNWMHANKKKLS
HVEDTTCRLNVPLDASTRNLFYLTEKELCPMNPAVFIAIISSGTASLVIFITLGTLYKLR
WHIRHWLYVIKYKNKGYEIIPYDPDFKYDVFLVYADEDTKFIFDIVVPYLEGKGNSLCVR
CRDFEIGKLYCDNIVDNMNLSRRILLILSNNFAKSKWCEFQMNFAYNRCLDEKINNIIVA
VWEEISYKFLSNTLKVLLTSYDYALWSKSDATGRSLFWGKILRKLQFQSDDTECANGLLG
VLQQEHGIKPIYKCVQKSA
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaacactgattttgctccttgcttttgtgttggtgtacgaaagtgtacatcca
aagccatgtgagcgaaatgaaaaaccgcccgttgggtgcacatgtacaaaatataaaggt
aaacagtactacgtgacaattaagtgcgtgaataaaggagaaagtccacgacgtgatact
attccctcgatgccaaacaatacttaccagttaatcattcaaggatttcgattcataaat
cttactatgaaaacgttcggtaatttgaggagactttcttccctgcaagtattaaattta
ctggataataacatcatcaccatatcccatgatgctctatccgaattgaaacatttaaaa
gaattggagatcagcaatgaaatccaagtgaataggagagaaatatcagagatgctttct
tacatcactcgcaacattacctttatcagattctcccataatgcctgggaccaaccgcct
gattttgctggactgtggaatgcaacacttcaaaatttaaccctgtcctataactattta
actgcattagaaggttctaacttttccagtttaaatcaacttcgcaaattagacgtatca
tacaatggaattacggaaaatggggttaattttactggtcttgaaaatatcaacgaattg
gttttggatggaaactggtttaaagaatttccaaagttttgtgactataaattttctaat
ttgtcaacaatctcgtttaagaataataaattaactgaatttagatcatcatattttcaa
tgtttaacaaatttgcaagccttgaatttaaatgggcatgcgataagaaagttgtataac
aatacatttgccaatctaacgtcattgcgtcaactttacatacagcggttggctggacaa
ctttcccacattgaaccagaagcgtttaaaagcaactcccttcaagaactcaggttttct
tacaatggatttttcttttccgatttccccaaagaaaccctcattatgttcaaatactgc
ccaaaattgaccttactagatatttcagcaaaccatcttaaattaaaagaaaacgaactc
acaaagatgataaaaaacttgaacaatcttacgacactaattattagaaatacaggatta
cactacctcccgggaaatttgacacgtcatttgccgatgttaaggaaactcgacgcttcg
gacaactatttaaacggatcatgggacgggaattctgtatttggaaacgtcccatctttg
caatatctggatttgtcggacaataacatcgaaagaatcactgaacataattttccacta
actctattgaatggattagatgagggcgggttggatcttagctataataaactctcttgc
aattgcgatgacgcgctatggttttacaattggatgcatgccaataagaaaaagttatca
catgttgaagatacaacatgtcgactcaatgttcctcttgatgcgagcacgagaaatttg
ttctatctcaccgaaaaagaactgtgtccaatgaatcctgctgtgttcattgctatcata
agttcaggtaccgcttctttggtgatttttatcacgttgggaactttatacaagcttcgc
tggcatatacgtcactggctttacgtcataaaatataaaaacaaagggtacgaaatcata
ccgtacgaccccgattttaaatatgacgtatttttagtttatgccgatgaggatactaag
tttatttttgacattgttgtgccatatttggaaggaaagggcaacagtttgtgtgtgaga
tgtcgggactttgagataggaaagttgtattgtgacaacatagttgacaacatgaatctc
agcagacgtattctattgattctgtctaacaattttgccaaaagcaaatggtgtgaattt
cagatgaattttgcatataacagatgcttggatgaaaaaataaacaacataattgtggca
gtttgggaagaaataagctacaagtttttatcgaacactctcaaagtcttgctgacgtca
tacgactatgctctttggtcgaagtctgatgcgactggacgaagtttgttttgggggaaa
attttgcggaaattacaatttcaatctgacgacaccgaatgtgctaatggtctgctcggt
gttctccaacaggaacatggaataaaacctatttacaaatgcgttcaaaagtctgcgtaa
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