Magallana gigas (Pacific oyster): 105336871
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Entry
105336871 CDS
T03920
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crg03009
]
105336871
Ribosome biogenesis [BR:
crg03009
]
Eukaryotic type
90S particles
Other 90S particles
105336871
Pre-60S particles
Other pre-60S particles
105336871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
CLASP_N
FemAB
Motif
Other DBs
NCBI-GeneID:
105336871
NCBI-ProteinID:
XP_065926068
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All DBs
Position
8:complement(41254254..41278260)
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AA seq
1290 aa
AA seq
DB search
MGSRKIQQKLVSKQKKGKGKRWKKGQSSSSNPDIKTYREAAKNRFFQTSKGESSLTIDAL
AKHDEQQIDKDGDVSFKAESDVVSAAGKTFNTWATNWTECTNTTFGRVHRYWASNSAFHK
EVLAVLAAVTEVIKTQGGSESETEYFAALMTALETTDSEESLAAVTYLLSLVLKRVPAPV
LKSRFSEIAKQFLDVLVKHSEGQSTALLKSLLLCLALLLRVQEQATWSNSSTQRVYQGLL
AFTVHKKPKVRKAAHQGVNIILRGSSFMTQGETAPPYHPAGSMTAKFCIQVIEQCGGSGE
SSDTLHILTLLKDIMGTFSLNSVKAVCETILRVMTLSNVMVTSCGMKALFGLFSGTPKPT
TLNAELNAQIITALYDYQPSDNDVQPMKAWLAVMEAAHKNLARLDEKLCLSHLPRVFSIC
MTCLLSERMEVACSATKTMKELLKACLAPAMDGISVLVTSAPSGANTPLHKIIKALDTGL
GYQFHAAWGLVLQVFAVLFEVAGKECPLLFKKSVLSIANLRDSPRFPYKAELDHAIGAAV
KYLGPRHVLEAVPLNITGDDDDYTFPRSWLIPVIRDNVGNTELGFFTTYFLPLAAKLKKR
SLEAESTGNQVVCKSYDALQGQIWSLLPGFCNQPTDLTQSFKGICKILGSAISEREDLRV
EVMSGLRKLINKSKEDEECKKEVARFAKNFLPILFNLFTTEPENTKDTTRLAVLETTKCY
LHIADTALVNTYCDKCKGKFHEEGISSFKRQALLDLLLVMLPLVKEMRVKEIFQLVTQFL
SDTDKTLQKKCYRVLEDLCGSPSPACQGFLTQNLPGIQGVLLQSLSSSSPSSKAPRLRCL
INIFKLLPEEQKDFLLAVVPEAILCTKEIGEKARSASYLLLVEMGRAKIRWNKDEHGALE
DYFQMVMAGLGGSPQMVSSTLLALTRILYEFKASISSSLLETIVENLCILLTSKTREVVK
AALGFMKVLLSAYPDTVLAPHLKQIMSSLVSQKEDCKHHFRFKAKEIYAKLIKKFGYETI
FGLSPPSIHKVLVNIKKTQERAKKKKKEKEEESEEESDQEHFKSQPESMDELLRDTDSEE
EGETKGAGKPRDRTQAKLAWLQEGGDIMDFLDPSASKKVLATKPGEKREQKTKKKEAEFK
TAPDGRLIITESSNEEEPEKMAGDDEELDDLLNAIEQGAGNVKKTKKRKVEDLGSDEEGP
APKYKAGGGGIHRPIVKAKRSAPHDPASEYRAKKAGGDIKKTGKPDPYVYLPLNFQALNK
RKKAKMTGRFTNLVKGAKKGAKKGAKKKKM
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgagaaaaattcagcaaaaattagtaagtaaacaaaagaaggggaaagggaaa
cgatggaaaaaaggccagagtagcagcagtaatccggacatcaaaacatatcgagaggca
gcaaagaacagattcttccaaacatcaaaaggagaaagtagtttgactattgatgccttg
gctaaacatgacgagcaacagatagataaagacggagatgtcagtttcaaggcagagtct
gatgttgtcagtgcagctggaaaaacatttaatacctgggcaacgaactggacagagtgt
acgaacacaacctttggtcgggtacataggtactgggcatcaaactcagccttccacaaa
gaggttctagctgtcctggctgctgttacagaggttataaaaacccaaggaggctccgaa
tcggagaccgaatattttgcagctttaatgacggcactagagaccacagacagtgaagag
tctctagcagctgttacgtatctgcttagcttagtactaaaaagagttcccgccccggta
ctgaagagtcggttctcagagatcgccaaacagttcctggatgtccttgtgaagcacagt
gagggtcaatccacagcgctgcttaaatcgttgttgctgtgcctggctttgttgctgaga
gtccaggagcaagcaacctggagcaactcctccacccagcgagtgtatcagggccttctg
gcatttacagtccacaaaaaaccaaaggtcaggaaggctgcccatcaaggagtgaacatt
attctgagagggagctcctttatgacccagggagagacggccccgccctaccacccagcg
ggctcaatgaccgccaagttctgtatccaggttatagagcaatgcggaggttctggtgag
tcctcggacacacttcacatactgaccttgctgaaggacatcatgggtacattttccctc
aacagtgtcaaggccgtgtgtgagaccatcctcagggtcatgaccctcagcaatgtgatg
gtgacgtcttgtggaatgaaggctctgtttggactgttcagtgggactcccaagccaacc
actctgaatgcagaactgaatgcacagatcattacagctctgtatgattatcaaccatca
gataatgatgttcagcccatgaaggcatggctagctgtgatggaggctgctcacaaaaac
cttgcaagactggatgagaagttgtgtctgagccatctgccgcgagttttctctatctgt
atgacctgtctgttgtcagagagaatggaggtggcttgcagtgctacaaaaaccatgaag
gagttgttgaaggcatgcctggcccctgctatggacggtatcagtgtattagtgacctca
gcgccatctggtgctaacacgcctctacataaaattatcaaagccttggacacaggactg
gggtaccagtttcatgcagcatggggactagtcttacaggtgtttgcggttttatttgag
gttgctggaaaagagtgtcctttgcttttcaaaaagagtgtcctgtcaatagccaacctg
cgggacagtccccgatttccttacaaagcagagcttgaccatgctatcggagcagctgtc
aaatatctgggaccacggcacgtcctggaagctgtgcctctcaacatcacaggagacgat
gatgactacacctttcctcgtagctggttgattccagtaatcagagacaatgttggaaac
acagagttagggttctttacgacctactttctccccctggctgctaaactcaaaaaaaga
tctttggaagcggagtccactggtaaccaagtggtgtgcaagtcttatgacgctctacag
gggcagatctggtccttactaccaggcttctgtaaccaacccacagacctcacacagtcc
tttaaaggaatctgtaagatccttgggtcggccatcagtgagcgagaagacctgagggtg
gaggtcatgtctggcctgaggaaactgatcaacaaaagcaaggaggacgaggagtgcaag
aaagaggtggcaaggtttgccaaaaacttcctgccgatcttgttcaacctttttacgaca
gaaccagagaacaccaaggacacgacccgattggctgtcctagaaaccacaaagtgctac
ctacacatagcggacactgcgcttgtgaacacatactgtgataaatgtaaaggaaagttc
catgaagaaggcatttcatcatttaaaaggcaagctttgctggatcttcttcttgtgatg
ttacctcttgtaaaggaaatgcgggtgaaggaaattttccaacttgtgacacagtttcta
tcagacacagacaagacattacagaagaagtgttaccgagtgttagaggacctgtgtggt
agcccctcccccgcctgtcaagggttccttacccagaacctccccggtatccagggggtg
ctgctccagtccctctctagttccagtccatcgtcaaaagcgcctcgtctgcgctgttta
atcaatatattcaagttattgccagaggagcagaaggacttcttgttagctgttgtacca
gaggcaattctgtgcaccaaagagataggagagaaggctcgctctgcctcgtacctactg
ttggtggagatgggccgtgccaagatacgatggaataaagatgaacacggtgccctggag
gactacttccagatggtgatggcaggacttgggggttcccctcagatggtcagctccact
ttgctggctctcactcgcattctctacgagttcaaagcctccatcagttcctcgttactg
gagacaatcgtggagaacttgtgtatattactgacctccaagacgagagaagtggtcaaa
gcagctctgggcttcatgaaggtccttctctccgcctacccagacactgttctggcacca
cacttaaaacaaattatgtctagtcttgtatcacagaaagaggattgcaaacaccacttc
aggtttaaagccaaggaaatttatgccaaacttatcaagaaatttgggtatgagacaatc
tttggcctctcaccaccaagtattcacaaggtgttggtaaacataaagaagacccaggag
agagcaaagaagaagaagaaggaaaaagaggaggagtcggaagaagagagtgatcaggag
cacttcaagtcccagccagagagcatggatgagcttctgagggacaccgactccgaggaa
gaaggagagacgaagggggcaggcaaaccaagggacagaactcaggctaaactggcctgg
ctacaagaaggaggggacatcatggacttcctggaccccagtgcatccaagaaagttctc
gccacaaagccaggagaaaagagagaacaaaagacaaagaagaaggaggcggagtttaag
acagctcctgatggacgcctgatcattactgagtcgagtaatgaggaagaacctgagaaa
atggcaggtgatgatgaggagttagatgacttattgaatgccattgagcaaggtgcaggg
aatgttaagaaaaccaagaagaggaaggtggaggatttgggatctgatgaagaagggccg
gctcccaaatataaagctggaggtggaggcatacacagaccaattgtgaaggccaagcgg
tcggctcctcatgaccctgccagtgagtacagagccaagaaagccggaggggacatcaaa
aagacgggcaagccggacccctatgtctacctcccactcaacttccaagctctcaacaag
aggaaaaaggcaaagatgactggtcgatttacaaatctagtgaaaggagcaaaaaagggg
gccaagaagggagctaagaagaagaagatgtga
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