Magallana gigas (Pacific oyster): 105337357
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Entry
105337357 CDS
T03920
Name
(RefSeq) cytoplasmic dynein 2 intermediate chain 1 isoform X1
KO
K22869
WD repeat-containing protein 60
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
crg03037
]
105337357
Cilium and associated proteins [BR:
crg03037
]
Primary cilia and associated proteins
Dynein and associated proteins
105337357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_RFWD3
WD40
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
105337357
NCBI-ProteinID:
XP_065941127
LinkDB
All DBs
Position
5:38547596..38568331
Genome browser
AA seq
1063 aa
AA seq
DB search
MPSEKIRSKEDTWSTNELKKALNKDEIRKERERLKRERRDGKGEDINEYEEKERRHRRDD
DDERRRHRGDEDRKKHRDSKREKTEEEREAERRERRERKEGKSSSKTDDKRKDEDKRRHR
DDDERKERRHRDRDEERHRDRDDRDRDEERERRRREKEAEREKRHRDKDEKHRDREGKSE
DRRRRHRDEDDDDKRRRHRDEDGDDKRRRHKEEDGDDRRRRHREDDGDDRRRRHRDEEDE
DQKRRHRKDEDDRERRKDRHKEDEDGHKKRRHRQKDGEEERRTLDEDERERQRQERREKR
ESKEGGKSRHRDEDDEERRRRKEKEREKEKQREREKEREREKKKTAKTSSKHAKEAEEEN
GYDEYEDDFEDYEDDFEDEEDEAPVAKGKLSDFELHKSPPKGGHGLDYSDSEMDEVLKAL
DQENERLQQDSRQQPESPRDQRESSYNRYNNNYDDQDSDSESARPVTRGLINFSGARQRA
MSRKAHSKTTKRAHDLLQMIELDVSSYDLFDLPPVKEYDLYIRSFGRTDTKQAYVQTNDD
NIDRDIQTDEIDLRQKWTQHPPEDFTGCGRGDGEKDLDEEESAQQNKQQDLGRLNSFIQK
AGQVISILLDEEKDQQRQEKADNRTNLALSEGYSQLTCLSILKGRSVQFAHFSPTQPNYL
LTIYNKPAEASESNPVDRKGIICVWNTNEPSYPQRILACESQPVCCCFSPYKTTLVFAGM
VDGSVCAWDLREPPALHKSVHYENSDHLLRYPTYNTAGIVEVDNHHSPITTLTPVVSYTD
SDSASQDSHEDSSGGLTFQLVSCEEMGILKFWVVAEISSPDMAGSEVDLGLSPGGRIKLV
LSSSMKLRNPLREKTETTKEKQGYLRTFELQLSPGDLNHYYVGTEKGFVYHGLRFGSKAY
PRMFTALSDAPVDIRTLDFSPFCHPCFLATTGDGDVHLFSTKTDTALVSWPARVWGTTGV
RCAKWSPSRPCVFYVLDDNSRLYTFDLLEGDSMPAKIETLSPDAKVTCLAFTSDVRTAGQ
GGRNPQMLICMESGVTQIHTIAKEFREQQTLEDEFLPSYLARF
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgaaaaaattcgctcaaaggaagacacttggtcgaccaacgagctcaaaaag
gccttgaacaaagatgagattagaaaagaaagagaaagacttaagcgagaaagaagagat
ggaaaaggggaagatataaatgaatatgaagaaaaagaaagacgacacagaagggatgat
gatgatgaaagacgtcgtcacagaggggatgaggatcgaaagaaacacagagatagcaag
agagaaaagacggaggaggaaagagaagccgagagaagagagagaagggaaagaaaagaa
gggaaaagctcttccaagactgatgataaacgtaaggatgaagataaaagacgtcataga
gatgacgatgaacgcaaggaaagaagacaccgagatcgagacgaggaaaggcatcgagac
agagacgacagagatcgagatgaagagagagaaaggagaagaagagagaaggaggcagag
agagagaaacgtcatagagacaaagatgaaaagcatcgtgatagggaaggaaagagtgag
gatagaagaagaaggcatagagatgaggatgatgatgataagcgaagaagacacagagat
gaggatggtgatgataaaagaagaagacataaagaggaggatggagatgacaggaggagg
aggcatagagaagacgatggtgacgatcgacgcaggcggcacagggatgaagaggatgaa
gatcaaaagcgaagacatagaaaagatgaggatgacagagaaagaaggaaagacagacac
aaggaagatgaggatggccacaaaaagcgaaggcatcgacagaaggacggtgaagaggag
agaagaacacttgatgaggatgaaagggaaagacagaggcaagagagaagagagaaaagg
gaatcaaaagaagggggtaaaagtagacacagggatgaagatgatgaagaaagaagacgt
aggaaagagaaggaaagagaaaaggaaaaacaaagggagagagagaaagaaagagaacgg
gaaaagaaaaaaacagccaaaactagcagcaaacatgccaaagaagcggaggaggagaat
ggatatgatgaatatgaagatgattttgaggactatgaagatgatttcgaagatgaggaa
gatgaagcacctgttgcgaaaggaaagttgtcagactttgagctccacaagtccccacct
aagggcgggcatggattggactattctgactcagagatggatgaagtgctgaaggccctg
gatcaagagaatgaaagactgcaacaggattccagacaacaacccgagtcaccgagagat
cagagggaatccagctacaaccgctacaacaataactatgatgaccaggactcagactca
gaatccgctagaccagtgaccaggggcctcatcaacttctcaggggccagacagagggcc
atgagtcgaaaggctcacagtaagaccaccaagcgcgcccacgacctactacagatgata
gagctggacgtctcgtcctacgacctgttcgacctccctccagtcaaggagtatgacctc
tacatcagaagctttgggaggacagataccaaacaggcttatgtccagaccaacgatgac
aacatagacagagacatacagacagacgaaatagatctccgacagaagtggactcagcat
cctccggaggacttcacaggatgtggaaggggagacggtgagaaggatctagatgaggag
gaatcagctcaacagaacaaacagcaagatctgggtcgcctcaactcttttatacagaaa
gcaggacaggtgatatccattttgctggatgaagagaaagatcaacagagacaggagaag
gcagataacaggacaaacctggccctgagtgagggctactcccagctcacctgtctctcc
atactcaaagggcgcagtgtccagtttgctcatttttctcccacccagccaaactattta
cttactatatacaacaaacctgctgaggcatcagagtcaaatcctgtagacaggaaaggt
ataatatgtgtgtggaacacgaatgagccatcttatcctcaaaggatcctggcctgtgaa
tctcaacctgtgtgctgttgcttcagtccatacaagaccactctagtctttgcagggatg
gttgatggttctgtatgtgcctgggatctccgggaacccccggctctacacaagtctgta
cattatgaaaactcggaccatttattacgttatcctacctacaacacagctggcattgtg
gaggtggacaatcatcacagcccaatcaccaccctcaccccggtcgtgtcctatactgac
agtgactcagcaagtcaagattctcatgaagattcatcgggtggacttacattccagcta
gtatcttgtgaggagatgggcatcctcaaattctgggttgtagctgaaatctccagtcct
gatatggcggggtcagaggttgaccttggactgtccccagggggaaggatcaaactggtg
ctgagttcctccatgaagctacgaaaccctctcagagagaaaacagagaccaccaaagag
aagcagggttacctacgtacgtttgagttacagttgtccccaggggatttgaatcattac
tacgtcgggactgagaagggttttgtgtaccatgggctgagatttggatccaaagcttat
cccagaatgttcacagccctcagtgatgctcctgtggacatccggacgctcgacttctcc
ccgttttgtcatccttgttttctggcaaccacaggagatggcgatgttcatttattcagc
acaaaaacagacacggcccttgtgtcctggcccgcccgtgtgtggggaaccacgggggta
aggtgtgctaagtggtccccaagtcgcccctgtgtgttctacgtcctcgacgacaacagc
cggctctacacgtttgatctgctagagggcgactccatgcctgctaagatagaaactttg
tctccggacgccaaggtaacctgtttagctttcacatctgacgttcgaacagcgggtcaa
ggaggcagaaatccacaaatgttgatctgcatggagtctggagtgacacagatccacacc
atagctaaagaattccgggaacaacagacactggaggacgaattccttccctcatatcta
gccaggttctga
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