Magallana gigas (Pacific oyster): 105337474
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Entry
105337474 CDS
T03920
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105337474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crg03019
]
105337474
03036 Chromosome and associated proteins [BR:
crg03036
]
105337474
Messenger RNA biogenesis [BR:
crg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105337474
Chromosome and associated proteins [BR:
crg03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
105337474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
105337474
NCBI-ProteinID:
XP_034300870
LinkDB
All DBs
Position
2:47449263..47467216
Genome browser
AA seq
1758 aa
AA seq
DB search
MFGAKPTGFSFGSGNATFGASSTTPFGAGNTSTFGTAGNKTFGGTPAFGSQTPNTGGTSL
FGQQSTSQTAGLFGQQSTGGAFGSTQSSGFTFGATPAPNPGGSMFGQQSTAQTTGGLFAS
PVSSTSFGAKTPGFGGFGTNPSTSAGMFGGSQQTSTLFGNPGASAGFVQTAPNGTTVKFN
PPTSQDTMVKNGVSTNINTRHQCITAMKEYQSKSLEELRVEDYLSNRKGKQATTGFATPS
ASGTFNPTPASTGTSLFGQQQQPQQPQQQSTSLFGQSKPLFGASTATGTSGFSGFGTTTS
TPSLFGQPTQNKPLFGSTPTTQAAGFGGTSAGFGGFGGFGSTSTAGSSLFNSKPAFGTTT
TAASGFGAPANNLFAKPTTGPSLFGSTSQPTSFGTTSGFSFGSTAGIGGTSTGGFGAKPP
PFGGTSTFNLGQTSGFSLSKPFGASTGIGTGFGPGFGMSTSLSQGGASTTLSSAAPQAAA
VPNEIQIKQQLMALASSPYSDSPLFWNLKPSDKKREEILKPTNPLAQKAVLSNQYKVSSR
PTAKMKPKSLHNMLNGSKNHIFEGLEDDDFSGGNESFMPKKSIKKLVIRKGSSNSSSPSR
ASSVLGESENHSVNEADLTQNGNSFLHDRLEKEQRIPEVHIPSKPMSENFDDTISQLNVH
KRVPITSKSPDDTDLSLNQTVDESIERPTTPPPPNLAGIVLTRPGYYTIPSVEELCELVD
ENGDCFVDGFTVGREGYGSIFFPGQINVANLNLDEIVHIRRKEVIVYPDDDNKPPEGEEL
NRKAEITLDCVWPTDKTTRSYIKDPERLKTLGYHEKMEEITARIGGRFLDYRPETGSWVF
EVKHFTKYGLEESDEEDLSALAQMKATSQKLQKTIKSGPTLEGERKPPASSVREAPAPQP
QDTTVPMTDDDIEGLPDISQETAPDSMVEDYSGEGYEEEMEEQPSSHRLAQSMGVSAQNM
QVMKASFFHEEDVPQQPDVLSSTRLEGKRGPSMFSSAYKNSFMSPVKLSSVPKSANIEKE
RGAFPPRIVTPEPIRPVKSKYQMPPVDEHLPIPSGMKSDDLPRRIVGSRIARAIPEFNKS
NMYDKQNVIWDAGLIHGRSFRVGWGPGWTLAHAGLTVTDRSTGAEETSFSMLSGSRKRKI
GQTNWNVALEKLNVTSYFQPDDPIVVRNHEELLSIQLEHAGRDVEEGCPVFAPRDGEVSL
QHIVERIKQDKNDTEGHPDHASVSYAETIWNLCAALFGTLPDDIVNNYELQNARREAVSR
WLSSTASDKIQKEIHEAKYKGKNHLPALFAHLTGRQVAAACSLSQKSGDTRLALVLSQCM
GSPYPKHLLDMQLNEWAELGAYKFIEELRLKLYVLLAGRMVWQTPQSVVNTCMDLDWKRA
FALHLWYMCPPTAPAQITKALEEYEMGCSGDSPLGMYCSPPLPPYLEEDQMGDTENIRDT
AYHLLKLYSERTYALESLFNPRSSTANHMDYRLSWHLLQVLQSVQAQYRHLSAYNTTCLH
LSFAAQLESIGMWEWAVFVVLHLEDRRSREWRTRDLLHRYVSVEEEFNEQEVFVREKLGV
PVEWIHYAKALKARNDRNHHAEAVHLLNSKRWNECHKVLLCHLSSDAIINENHGYLHRFL
VELAPHDRCKQIVDWSAGGQVLLDYITLVSKLEQIKLDIERNEHGRGVAVDSLRTDITSL
CDRISNLPCYQSRDRLCQSEISKRLSVLFHTILNLQGDQDLSVRLMAPYIGQLPMPEDYR
LQELSSLTRNFSASYLRL
NT seq
5277 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgcaaaaccaacaggattttcttttggatctggcaatgctacatttggtgca
agttctacaaccccttttggagcagggaacacatcaacatttggaactgcaggcaataaa
acatttggaggaacgccagcatttggttcccagaccccaaacacaggaggcaccagctta
tttggtcagcagagcacatctcagacagcaggcttgtttggccagcagagcacaggaggg
gcctttggcagcacccagtcatcagggtttacatttggtgctacacctgcccccaaccct
ggaggcagtatgtttggtcagcagagcacggcacagacaacaggggggttgtttgcctca
cctgtgtccagcacaagttttggagccaaaactccaggatttggaggatttggtacgaac
ccttcaacatctgcaggaatgtttggaggaagtcaacaaacatcaactctttttggtaac
ccaggtgctagtgcaggttttgttcagacagctccaaatggaacgactgtcaagttcaac
cctcccaccagccaagatacaatggtcaagaatggagtcagcacaaacatcaatacacgg
catcagtgcatcaccgcaatgaaagagtaccaaagcaaaagtctagaggagctccgagtt
gaagactatttgtcaaatcgcaaagggaaacaggctactactgggtttgcaaccccgtca
gcttctggaacatttaatccaactccagcctcaactggtacatctttgtttggacaacag
caacagccacaacagccacaacaacaaagtacaagtttatttggacaaagcaaacctttg
tttggagcttcaactgccaccggaacatcgggcttctctggctttggcaccacaacatca
actccaagtttgtttggccaaccaactcaaaataagcctctctttggttctacaccaact
acccaggctgcaggctttgggggaacaagtgcaggatttgggggatttggtggctttgga
agtactagcactgcaggttcaagtctgtttaactcaaagccagcatttggaaccaccacc
actgcggccagtggttttggagcacctgccaacaatttgtttgccaaaccaaccacagga
cccagcctctttggaagcacatcccagcccaccagctttggaacgaccagtggattttcc
tttggaagtactgctggaataggaggaaccagcacaggagggtttggagctaagcctcca
ccatttggaggcaccagtacctttaacttaggccagacttctgggtttagcctcagtaaa
ccatttggtgccagtacaggaatcggcacaggatttggaccaggctttggtatgagtaca
agtttgtctcaaggtggcgcttcaacaaccttaagctcagctgcccctcaagcagcagca
gttcccaatgagattcaaatcaaacagcagttgatggctctggctagctccccatacagt
gattccccattgttttggaatctgaagccaagtgacaagaaaagggaagaaatcttgaaa
ccgacaaaccccttggcccagaaagctgttctgtccaatcagtataaagtcagctccaga
cccacagccaaaatgaaacccaaatcattgcacaacatgctcaatggctcaaagaaccac
atttttgagggcttggaagatgatgactttagtggtggaaatgaaagcttcatgccaaag
aagagcatcaagaagctggtgatccgaaaaggtagctccaactccagttcacctagccgt
gcctcatcagtgttgggagagtcagagaatcacagcgttaatgaagctgacctcacacag
aatgggaactcattcttgcatgacagactagagaaagagcagagaattcctgaggtccac
attccatcaaaacctatgtcagaaaactttgacgacacaatatcgcaattgaatgttcat
aaacgagttcctataacatctaaatctccggatgacacggatctcagtctgaatcaaaca
gtagatgaaagcatcgagagacctaccacacctccaccacctaacttggcaggtatagtc
ctgactcgtcctgggtactacacaataccctcagtggaggagctttgtgagctagtggat
gagaatggagactgttttgtggatggctttactgtggggagggagggatacggaagcata
ttcttccccggacagatcaatgtagccaacctcaatctggatgaaattgtgcatattcga
cgtaaggaggtcatcgtgtacccagatgatgataacaagccacccgagggtgaggagttg
aacaggaaggcagagatcaccctagactgtgtgtggcccacagataaaacaactcgatcc
tacattaaggatccagagagattaaagaccttaggataccatgaaaaaatggaagaaatt
acagctcgcattggtggcaggttcttggactatcgaccagaaactggctcatgggtgttt
gaggtgaaacattttacaaagtatggtttggaggagagtgacgaggaagacttgtctgcc
cttgctcaaatgaaggcaacgagtcagaaattgcaaaagacgattaagtctggacctaca
ttggaaggggagaggaaacctcctgcatcctcagtgagagaagcacctgctccacagccc
caggacacgactgtacctatgacagacgatgatatcgagggtctccctgatatatcacag
gagacggcccccgatagcatggttgaggactactcaggtgagggatacgaggaggagatg
gaggagcagccttcctcccatcgcctcgcccagagtatgggagtcagtgcccagaacatg
caggtcatgaaggcctccttcttccacgaggaggatgtaccacagcagccagatgtattg
agttcaactcgtctagagggaaagcgaggaccaagcatgtttagttctgcctacaagaat
tcttttatgtcgcctgtaaagctttccagtgttccaaaaagtgccaatattgaaaaagaa
aggggagcttttccccctcggatagtgacccccgagccaatccggccggttaagtctaaa
tatcagatgcctccagtggatgaacacctgcccattccaagcgggatgaagtcagatgat
cttcctcggaggattgttggatcacggattgccagggctatcccagagttcaacaaatcc
aacatgtatgataagcagaatgtgatctgggatgcaggtctaatccatgggcggtcattc
cgtgtagggtggggcccagggtggacacttgctcatgctgggttaactgtcactgacaga
agcacaggagcagaagaaacttctttctccatgttatcaggttcaagaaaaaggaaaatt
ggccaaacaaattggaatgttgctctagagaagctaaatgtgacatcttacttccaacca
gatgacccaatagtagtgcgtaaccacgaagagttgctgtccattcagctggaacatgca
gggagagatgtggaggaggggtgtcctgtctttgcccccagggatggggaggtgtcccta
cagcacatagtggagcgcatcaagcaggacaaaaacgatacagagggacatccagaccat
gccagtgttagctacgcagaaacaatctggaacctgtgtgctgctttgtttggaacgcta
ccagatgacattgtgaataactatgagctacagaatgctaggagagaggcagtttctagg
tggctttcttctacagccagtgacaaaatccaaaaagagattcatgaagccaaatacaag
ggaaagaatcacctacctgctttatttgctcacctgacaggtagacaggtagcagcagcc
tgcagcctgtcccagaagagtggggacacacggctggcattggtcctctcacagtgcatg
ggtagtccctatcccaaacatttactggatatgcagctcaatgaatgggccgagttaggg
gcctacaagtttatagaggagctgagactaaagctgtacgttctccttgctggtcgtatg
gtgtggcagactcctcaatctgtcgtcaacacttgtatggacttggactggaagagggct
tttgcacttcatttatggtacatgtgccctccaactgcaccagcccagatcaccaaagct
ctggaggagtatgaaatgggttgtagtggagattcacccttggggatgtattgtagccct
ccattgccaccatatctagaggaggatcaaatgggggacacagaaaatatccgagatact
gcataccatttgctcaagttatactctgaaaggacctatgcccttgaaagtctttttaat
cctagatcttcaactgcaaatcacatggactatagactgagctggcacctgctgcaggta
ctccagtcagtgcaggcccagtatcgccatctgtcggcctacaacaccacctgtctacac
ctcagcttcgccgctcagctcgagtccataggaatgtgggagtgggcggtctttgtagtc
ctacatctggaagacagaagaagtcgagagtggaggacgcgagatctgttacacagatat
gtctcggtagaggaagagttcaatgaacaggaagtctttgttagagaaaagcttggtgta
ccagtcgaatggattcactacgcaaaggctctgaaagctcggaatgatagaaatcaccat
gctgaagccgttcacttgctgaactcaaagcgatggaatgagtgtcataaagtcttgctg
tgccatttgtcatcagacgccattattaatgaaaatcatggctacctgcatcgatttctg
gtggagttggccccacatgacaggtgtaagcagatcgtggactggtcggctgggggtcag
gtgttactggattacatcacactggtcagcaaactggaacaaataaaactagacatcgag
agaaatgagcatggaagaggtgtagctgttgatagtttacggacagacattacatcatta
tgtgacagaatatctaatttaccttgttaccaatccagagacaggctgtgccagtcggag
atatctaagagactgtctgttctcttccacaccatacttaatttacaaggagatcaagac
ctctctgtcagattaatggcaccctacataggacagttaccaatgccagaagattacaga
ctgcaggaactgagcagtttgactcgcaatttctcagccagttatttaaggctataa
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integrated database retrieval system
