Magallana gigas (Pacific oyster): 105337618
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Entry
105337618 CDS
T03920
Name
(RefSeq) toll-like receptor 4
KO
K18808
toll-like receptor 13
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
crg04054
]
105337618
Pattern recognition receptors [BR:
crg04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
105337618
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GFIT
Motif
Pfam:
LRR_8
TIR
LRR_4
TIR_2
LRR_6
LRR_14
LRRNT
LRR_9
Motif
Other DBs
NCBI-GeneID:
105337618
NCBI-ProteinID:
XP_011440734
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Position
5:47910101..47912882
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AA seq
864 aa
AA seq
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MAHCIQYFIIFFCFDEFARGRSCCNEQKCVCAQLEHFKELYHMDCSNRGLTEIPIPSKDT
EVYSIDLSRNELRNVTITNHFSRTLKQLNLSHNELSILSNNSFNWIPYLEVLDLSYNILR
LSNTSLPNLVFQYLSNLKVLNLSHNDVIGTDHYNAEIFRHTESLETLVIDGLRNGNFDFK
TKNKRCAPSYVTNHDTIELTKLTTLIVSGRRNRSKCLVTDLSAGFFDSVSNITYLDMSGC
AIQSIGRESLSPLSHLTYLDVSYNEQLSFHSIRNISTLKGLKTLKLDKIHCTFGRGIYIT
EDMVHALRDTSIENISLKSNRIEMAARSVYYYLPPNLTNADISDNRLTFGAYVLTAYAFR
NLKFANLSGQSSSHFTGKTDDFMICKHATVCSSLSTQHTHPVLNREISLFRSKEGVKLYL
PPHLETIDISSSSLSSNIHVLYIDPNNNLKTINFSHNFFQHLGGPVYGLQKIETCDFSNN
FISYLSPDFFIYCTTLKYINFKGNLLGNSMSKSNATYFVHLRNLTFLDLSSNVIRFVSPD
IFEGLESLKTLNLSFNLLRNFSFRTHQMPFLRTLDLSFNELLPFSDFTIKFLESRQRLQS
LKIILTGNVIPCTCDSLDFFKWMLSHEKTVEVDYSYICQNMHSVENSNDLELIRKILMKK
CDDYDEIIGVVSALFVVFFAFIVSGIIHRYRWKLRYIYYMSIWSTTTSHKSYGKVYDYDA
FVSYADEENDFVIQEMTPELEEVSDLRLCLHERDFTPGISIGENITKAICNSRKVLCVVT
ENFLCSQWCMYELEMALTDNRYSRDDQSVFLIMYGGLPTDSCKIRSSIRLMSLVKEHAYL
EYPNDESNRAEFWNSLRLIAGKKP
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggcacattgcattcagtattttattatctttttctgctttgatgagttcgcgcgagga
agatcttgttgcaatgaacagaaatgtgtttgtgctcaattagaacactttaaagaactt
tatcacatggactgttccaatagaggattgactgagataccaattccttccaaagacacc
gaagtttatagcattgatttatcacgaaacgagttacgaaacgttacaataactaatcat
ttttctagaactttgaaacaattaaatttatctcacaatgaactaagcatcctttcgaat
aacagttttaactggattccataccttgaagttttagatttgtcctataatattctcaga
ttgtccaacacaagtcttcccaatctggtattccaatacctgagtaacctaaaggtcctg
aacttgtctcacaatgacgtcatcggtacagaccattacaatgcagaaatatttcgtcat
actgaatctttggagacgctagtcattgacggcttgcgaaatggcaacttcgactttaaa
acaaaaaataaaaggtgcgctccatcatatgtaacaaaccatgacacaatagaattaacc
aaacttacaacactgatagtgtccggacgaagaaatcgctccaagtgcttagttacggat
ctgtcagcaggctttttcgacagtgtatctaatatcacgtatttagacatgtctggttgc
gcaatccaatcaatcggcagagaaagcttgtcgcctttatcacatttaacatacttggac
gtgtcctataatgaacaactttcttttcattccattcgaaatatttcaaccctcaaaggt
ctaaagacactaaaactggacaaaatccattgcacatttggcaggggtatatacataaca
gaagatatggtacatgctctccgagatacttccatagaaaatatttcccttaaaagcaat
agaatagagatggctgcacgcagtgtgtattactatttacctccaaatttgacaaatgca
gatatctccgacaatagattgacttttggagcatatgttcttacggcttatgctttcagg
aatcttaagtttgctaatctaagcggtcaatcatcatcccattttaccggtaaaactgat
gattttatgatctgtaaacacgcgacggtgtgctcttcattaagtacgcagcatactcac
ccggtccttaatcgggaaatttcattgtttcgttcgaaagaaggcgtaaaactctaccta
cctccccatctagaaacaatagacatttctagttcatcactgagttcgaatattcatgta
ctctatattgacccgaataacaatttgaaaacaataaattttagccataacttttttcaa
catctcgggggaccagtctatggactacaaaaaattgaaacatgcgatttttcaaataac
tttatttcttatctatcgccagatttctttatatattgtaccacgttaaaatatattaat
ttcaaaggtaacttgttagggaattcgatgagcaaatcaaacgcgacttattttgtacat
ctcagaaatttgacatttttggacctttcatcaaatgttattcgctttgtttcccctgac
atttttgaaggtttggaatctctgaaaacactgaatcttagtttcaatttacttagaaat
ttttcatttagaacgcaccagatgccttttttaagaacactagatctttcgtttaatgaa
cttttgccattttccgattttacaattaagttcctagaatcaagacaacgtttgcagtca
ctgaaaataatactgacaggaaatgtgattccatgtacttgcgactcccttgattttttt
aagtggatgcttagtcacgaaaaaactgtcgaagtagattattcatatatttgtcaaaat
atgcattctgtagaaaacagcaacgacttggaattgatcagaaagattcttatgaaaaaa
tgtgacgattacgatgaaattattggggttgtgtctgcactttttgttgtgttctttgcg
tttattgttagcggaattattcatcgctaccggtggaagcttcgatatatctattacatg
tcaatatggagcactaccacgtcacacaaatcatatggtaaagtatacgactatgacgct
tttgtttcttatgccgacgaggagaatgattttgtcatacaggaaatgacgccagagcta
gaggaagtgtcagacttgagactgtgtctccacgagcgagattttacaccaggtatatca
atcggcgagaacataaccaaggcaatatgtaacagcagaaaggttttgtgtgtcgtaaca
gagaactttttgtgctctcagtggtgtatgtatgaactagagatggccctcacagacaac
aggtactccagagacgatcaatcggttttccttatcatgtacggaggattgccgactgat
agctgtaaaattcgttcatcgattcgacttatgtctttagtgaaggaacacgcctatcta
gaatatcctaatgatgagagtaacagagctgaattctggaattcactaagactaatagct
gggaaaaaaccttaa
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