Magallana gigas (Pacific oyster): 105337940
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Entry
105337940 CDS
T03920
Name
(RefSeq) protein mago nashi homolog 2
KO
K12877
protein mago nashi
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03013
Nucleocytoplasmic transport
crg03015
mRNA surveillance pathway
crg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105337940
09122 Translation
03013 Nucleocytoplasmic transport
105337940
03015 mRNA surveillance pathway
105337940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crg03019
]
105337940
03041 Spliceosome [BR:
crg03041
]
105337940
Messenger RNA biogenesis [BR:
crg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105337940
Spliceosome [BR:
crg03041
]
Complex C
Other components
EJC/TREX
105337940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago_nashi
Motif
Other DBs
NCBI-GeneID:
105337940
NCBI-ProteinID:
XP_011441186
UniProt:
K1QQQ7
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All DBs
Position
7:44538962..44543668
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AA seq
148 aa
AA seq
DB search
MAASKDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEAYVHKSVME
ELKRIIEDSEIIQEDDALWPPHDRVGRQELEIVIGDEHISFTTSKIGSLVDVNQSKDPEG
LRTFYYLVQDLKCLVFSLIGLHFKIKPI
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtccaaagacttctacttgcggtattatgttggtcacaaagggaaatttggc
cacgaattcttggagtttgaatttcgcccagatggaaaattacgatatgccaacaactca
aattacaagaatgatacaatgatcagaaaagaggcctacgtacacaagtctgtaatggaa
gagctaaagagaatcattgaggactcagaaatcatccaggaagatgatgcgttatggcca
ccccatgacagagttggtcgtcaggagcttgagattgtaattggagatgaacatatttct
ttcacaacatctaaaattggatcactagtggatgtcaaccaaagcaaggacccagaagga
ctgcggaccttctactatctggtccaggatctgaaatgtttggtgttctccctgattggg
cttcacttcaagatcaagccaatctag
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