Magallana gigas (Pacific oyster): 105338218
Help
Entry
105338218 CDS
T03920
Name
(RefSeq) PR domain zinc finger protein 1 isoform X2
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crg03000
]
105338218
Transcription factors [BR:
crg03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
105338218
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
zf-C2H2_4
C2CH-3rd_BIRD-IDD
SET
zf-C2H2_6
zf-C2H2_jaz
zf-C2HE
zf-C2H2_15
zf-met
Zf-C2H2_ZNF451
LIN13_zf
zf-C2H2_11
zf-C2H2_FBX41
Zf-C2H2_ZNF451_C
DUF7129
Motif
Other DBs
NCBI-GeneID:
105338218
NCBI-ProteinID:
XP_011441523
LinkDB
All DBs
Position
9
Genome browser
AA seq
833 aa
AA seq
DB search
MMPDAMAASDVDVTDISDNESEKSSDSDFSNTETDLEECWDSSNLKEDEFEEFSVYIVHD
RACDRVCPNRAQASLPRNLTLKPSQNQVNNGLGVWSLDHIPRGTRFGPLVGEVFSREPYS
RKETDRISLWKVFKNNNVYQFLDNSDVTRSNWMHYTNFAYTAAQQNLIACQIDFNIYFYT
TKPIPPNTELMVWYCREYADRLNCPLTGEEMLQNWRRQYIERQITMPKPLLPLPICHNAF
KPDLSDSKFCPEKLTKESKNESSDSSRDDGFAIDYSLHKRDGSPTSEDLERSREERKKSE
NMEIIPSPTKSPPISYLRDRLSPMSIFQASSTPSAFHPKPVMAHSTPKKSSSGAVFDSLL
MKKMKENGEDVPDKMLKGDMSPLDFKSPNEIKSQISPAHEPKIKTEESSPKDLKDRAPHP
DQFNPFNPFFFKFMQPNPMMDKNNMPMPPYMGRPEENKFMSKMPPHSGPPLYFPTPSMPY
LPAMYPFGPYPGMPWQMFPPPFQQMGNQQAPMPFPPRPMMPQPEQVLNLTKPRMEGVHGR
GHRSLPYPLRKKDGKMHYECNVCYKSFGQLSNLKVHLRTHTGERPFVCQTCGKGFTQLAH
LQKHHLVHTGEKPHECTVCGKRFSSTSNLKTHMRLHSGEKPFHCKLCPAKFTQFVHLKLH
KRLHTNERPYECPQCNRKYISASGLKTHWKTGNCIPPGLNIDYNTLLENTHHEVISQDRQ
DGYNENMEGEKFEKYDQELDEDLSNQSHLDSFNNNADSPSANGSLNHLRLNSCSSSVIGS
DEEGEKNPPSPAFSDPENSSTSVFEKPVEYTMSPSPPKLSSPPLISNPEPVSV
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgatgcctgatgctatggctgcctctgatgtggatgtgacagacatttcggacaacgaa
tctgaaaagtcgagtgattctgattttagtaacacagaaacagatttagaagaatgctgg
gatagctcaaacctgaaagaggatgagttcgaggagttttctgtgtacatcgttcatgac
cgggcatgcgatcgagtgtgtccaaaccgtgctcaagcctccctacccagaaacctgacc
ctgaagccctcacagaaccaagttaacaatggactcggagtttggagtcttgaccatatt
cctcggggaaccagatttggaccacttgttggagaagtcttttcccgtgaaccatatagc
aggaaggaaaccgacagaatttctctttggaaggttttcaaaaacaacaatgtctaccag
ttccttgacaacagcgacgtgacacgcagcaactggatgcactacacaaatttcgcctac
acggcagcccagcagaacttaatcgcgtgtcagatagacttcaatatttatttctacacg
acgaagcccatcccccccaacacggagctcatggtgtggtactgtagggagtatgctgac
cgcctcaactgccccctgacaggggaggaaatgctgcaaaactggaggcggcagtatatc
gagcgacagatcaccatgcccaaacctttacttcctcttcctatctgtcacaacgcattc
aaaccggacctgagcgattccaaattctgtccagaaaaactgacgaaggagtccaaaaac
gaaagtagtgacagcagtcgagacgatggcttcgccattgattacagtttacataagaga
gatggttcgcccactagcgaagatcttgagaggagtcgagaggaacgcaaaaagtcagaa
aatatggaaattatcccctcccccactaagtctccgcccatcagttacttgagggatagg
ctgtcgccaatgtctatctttcaggctagctccacaccatctgctttccacccaaaaccg
gtcatggcacacagcactccaaagaaatcatcgtccggtgcggtgtttgatagtctgctg
atgaagaagatgaaggaaaatggtgaagatgtgccagacaaaatgctgaagggagatatg
tctccacttgactttaaatcacccaatgaaatcaaatcacaaatctcacctgctcatgag
ccgaaaatcaaaaccgaagaatctagtcccaaagatctgaaggatcgtgcacctcatcca
gaccaattcaaccccttcaatccattctttttcaagttcatgcagccaaacccgatgatg
gataaaaacaacatgcctatgcctccatacatgggccgtccagaagaaaacaaatttatg
tccaagatgcctccccattctgggccaccattgtatttccccaccccatccatgccctat
cttccagccatgtatccatttggcccatacccaggaatgccctggcaaatgtttccgcct
cctttccagcagatgggcaaccagcaagcaccgatgccatttccacctcgacccatgatg
cctcagccagagcaggtcctcaatctcacaaaaccaagaatggagggggttcacggacgg
ggacacagaagtctgccctatcctctgagaaagaaggatggaaagatgcactatgagtgt
aatgtttgttataaatcattcggacaattgtcaaatttaaaggtgcaccttcgcactcac
actggggaaaggccatttgtctgccagacttgtggcaaaggtttcacccagctcgctcat
ctacagaagcaccatcttgtccatacaggcgaaaaacctcacgagtgtacagtctgcgga
aagagattcagctcaacctccaacctcaaaactcacatgcgcctacactcgggggagaag
ccctttcattgtaaactctgtccagccaaattcactcaattcgtccatcttaaacttcat
aaaagactgcacaccaatgaacgtccatacgagtgccctcagtgtaaccgcaagtacatc
agtgcgagtggactcaaaactcactggaagactggcaactgcatcccgcccggtttgaac
attgactacaacacgctgttagaaaatactcatcacgaggtcatcagccaagaccggcaa
gacggatacaacgaaaacatggaaggcgagaaattcgaaaaatacgaccaagagctggac
gaggacctctccaatcaaagtcatttagactcttttaacaataacgcagacagtcctagt
gctaacggaagcttgaatcatttacgtttgaacagttgtagtagcagcgtgattggaagt
gacgaagaaggggagaagaaccctccctcaccggctttctctgaccccgaaaacagcagc
accagtgtgtttgagaaaccagtggagtataccatgtcaccctcacccccaaaactgtca
tccccaccccttatctcaaaccctgagcccgtctcagtttaa
DBGET
integrated database retrieval system
