Magallana gigas (Pacific oyster): 105338335
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Entry
105338335 CDS
T03920
Name
(RefSeq) syntaxin-17
KO
K08491
syntaxin 17
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04130
SNARE interactions in vesicular transport
crg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
105338335
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105338335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105338335
Membrane trafficking [BR:
crg04131
]
SNARE
Syntaxin (Qa)
Stx-sER
105338335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
C19orf12
ALMS_motif
MCPsignal
TCTP
DUF5693
DUF5798
SlyX
Motif
Other DBs
NCBI-GeneID:
105338335
NCBI-ProteinID:
XP_011441697
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All DBs
Position
2:complement(17596787..17602225)
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AA seq
313 aa
AA seq
DB search
MASFESKAVKQSITPQEVQKFSLQRLEISVKKFIKVITIDIDRLQQHRLNVEKFNRISDW
NALHRENINATRTVQQIKANIKEIKKLRNQVLEEDIDKFDDRTEPMVQQAIQTLQDFVNL
NTELSQTCDDSEVFLERHRTLSENELDISGMEQLHQIPDNSQAEESWENLHESLTELNSM
VHEFSSAVKTQQETIDRIEDNIDKAHSEVQKGAFELGKASKFKTAVFPIAGAVIGTVVAG
PVGLFAGAKIGAALGLGIGGTAGFFGGKYLKNRQNKVTEVEMRNLSVKKSSSLPDLQAAS
QSTQKKESWFSLR
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatttgaatccaaggctgtaaaacagagtatcactccacaggaagtacagaag
ttttcattgcagagattagaaatatcagtgaaaaaatttatcaaggtcataacaatagac
atagataggctacagcaacacagactcaatgtggaaaagtttaacagaatcagtgattgg
aatgctcttcacagagagaacattaatgcaacaagaacagttcaacaaatcaaggcaaat
ataaaggaaattaagaagttacgaaaccaggtcttggaggaagatattgataaatttgat
gacagaactgaaccaatggtgcagcaggcaattcagactcttcaagactttgtgaactta
aacacagagttatctcagacttgtgatgacagtgaagtgttcttggaaagacacagaact
ctgagtgaaaatgagcttgacatctcaggaatggaacaattacatcagataccagataac
tcacaggcagaagaatcctgggaaaatttacatgaaagcttaactgagctaaattccatg
gtacatgaattttcaagtgctgttaagactcaacaagaaaccattgatagaattgaagac
aacattgataaggcacacagtgaggttcaaaagggggcatttgaattgggaaaggcttcc
aagttcaagaccgccgtcttcccgatagcaggtgctgtgattggaacagtggtagcagga
cctgtcggattgtttgctggggccaaaattggggctgcgttggggttgggtattggcgga
acagcaggattttttggaggtaaatacctgaagaacagacaaaacaaggtgacagaagta
gaaatgagaaatcttagtgttaaaaaatcttcttcactcccagatctacaagcagcatca
cagtcaacacagaaaaaagagtcttggttttctttgagatga
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