Magallana gigas (Pacific oyster): 105338470
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Entry
105338470 CDS
T03920
Name
(RefSeq) cohesin subunit SA-1 isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
crg03036
]
105338470
Chromosome and associated proteins [BR:
crg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
105338470
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
WipA_N
INTS7_N
Motif
Other DBs
NCBI-GeneID:
105338470
NCBI-ProteinID:
XP_065924838
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Position
8:2436568..2458093
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AA seq
1228 aa
AA seq
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MRGARKAKSKAKVTVQGAFVEATSDLPVPENDSDSDFEEPMSVSGAGSGRGRKRGSGRGG
SAVKRPRQTGAAARNRKKSEDEEDSGTGSLFDVVKSGKASLQSTVDEWIESYKNDRDTAL
VELIQFFIQGSGCKGTITPFMYANQEHAEIIRKMTEEFDEDSGDYPLIMSGPNWKRFRVN
FCEFVQVLVRQCQYSIIYDQYMMDNIISLLTGLTDSQVRAFRHTSTLAAMKLMTALVDVA
LNLSINLDNTQRQYEAERQKQQPKRANDRLEMLLQRRQELEENQAEIRNMLTYIFKGVFV
HRYRDSQPEIRSICMAEIGTWMKKYPNMFLDDGYLKYVGWTLYDKSGEVRLCCLKSLQPL
YDTEELATKLELFTNRFKDRIVEMTLDKEHEVAVQAIKLVISILQFNEQILADKDCENVY
ELVYSSHRHVAQAAGEFLNAKLFRRDENSTNKLKIHRGKKQSLNTPLLRDLVQFFIESEL
HEHGAYLVDSLWEINDMMKDWECMTDLLLEEPAKGEEYMDDKQETSLIEIMVCCVRQAAT
GESPVGRGTSKKLTSKENKQVLEDKTRLTEHFIATLPQLLLKYLMDGEKVANLLQIPQYF
DLDIYTTSRQEKNLELLLRYLHEIMEKHTDSEVLEAASKCYESLCSEEFAIAGKCDVARK
TLIDSLIAKFKESMHDFFAEGEEPDDDEIFALLACLKRIEALYSCHDLNSWDIWDDIFHI
IKSGNDSQGIPEEIVCKALACGSQALLWYLNKLDEANPNKNEMKSLRKRLNDMMKYCHDL
LFHQQDKVGEEAYITICDLLVMFSRHLGEINEVMRPLVYEPDKNLQQQLSNFLTEKVFIE
DDDDDIDENVKIEELHKRRNFLASFCKLVIYNIVQIRMAADMFKHYMKFYNDYGDIIKAT
LGKAREINKVSTAKTLALSLTQLYKELQMEMGAVDRSSEAFQSLKELSRRFALSFGLDQV
KNREAVAAMHKEGIVFSLHVDEHHDLSTPPPNLSFLEVICEFTNKLMKQDKKVVLHYLDK
HLPGGMMPQSRSEEWQSLFTYRNSLSQGDGEVHPITLKQATQRRYANKRKQIDVSDHDSN
MSDWVDMSVGTPAPGVPVMASTAIKRRRMDEESVGGASEQSEDFQESYIGGAPPTPHMSW
MTAQKGQTGAQRHMEAAYGHYRQGGNLPPMETEGSEASIGDFESPRSHVMPPGYYGDGTQ
NIEDPSHSGVIHHLPPVQVPSEMSHHGY
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atgcggggagcaaggaaagcgaagtcaaaggcaaaggtcacagttcaaggggcatttgtt
gaggcaacctcagacttaccagtaccagagaatgactctgacagtgattttgaggaacca
atgtctgtgtctggtgctggcagtgggcgaggacgcaaaagggggtcagggagagggggc
agtgcggtgaagcgcccccgccagactggtgcagcggccaggaacaggaagaagagtgag
gatgaggaggactccggaactggttctctgtttgatgtcgtcaaaagtggaaaagcctca
ctgcagagcactgtagatgagtggatagaatcatacaaaaacgacagagacacagcgctt
gtggagctcattcagttctttatacagggctcagggtgcaaaggaaccataactccgttc
atgtatgccaaccaggaacacgcagaaattatccgtaaaatgaccgaggaatttgatgag
gacagtggagactaccctctgatcatgtctggtcctaactggaagcgtttccgggtgaac
ttctgtgagtttgtgcaggtgcttgtccgacagtgccagtacagcatcatctacgaccag
tacatgatggacaatatcatatctctactgaccggtctcactgactcacaggtccgtgcc
ttcaggcacaccagcaccctggcagccatgaagctgatgacagctttggtggatgtagct
ctgaatctgagcattaatttggataacacacagaggcagtacgaagccgagcgacaaaag
cagcagcccaagagggccaacgaccgactggagatgttgttacagcgcaggcaggagctg
gaagaaaaccaagcagaaatcaggaacatgttgacctatatctttaaaggagtctttgtc
cacagatacagggattcccagccagagatccgctccatctgtatggcagagatcgggacc
tggatgaagaagtaccccaacatgtttttagacgacggctacctcaagtacgtggggtgg
accctctatgataagagtggagaggtacgcctatgctgccttaaaagtctgcagccattg
tacgacacagaggaacttgccacaaagctggagctgtttaccaacagattcaaggatagg
attgtggagatgactcttgacaaggagcatgaagtagctgtgcaggccatcaaattggtc
atcagtatactacagttcaatgagcagattctggcagacaaggactgtgagaatgtctac
gagttggtatactcctctcacagacacgtggctcaggccgctggcgagttcctcaatgcc
aagctgtttaggcgcgacgagaacagcaccaacaaactcaaaatccaccgtggcaagaaa
cagagtttgaacacacccttgttacgagatctcgtccagttctttattgagagcgagtta
cacgagcatggtgcgtacttggtggacagtttgtgggagataaacgacatgatgaaggac
tgggagtgtatgaccgacctacttctggaggaacctgccaagggagaggagtatatggac
gacaaacaagagaccagtctgatagaaatcatggtgtgttgtgttcgtcaggccgcgact
ggggaatcccctgtaggaaggggcaccagcaaaaagctgacatccaaagaaaacaaacag
gtgcttgaggacaagaccaggctgactgagcacttcatagcaaccctaccacagctcctt
ctgaagtacctgatggatggagagaaggtggcgaacctgcttcagatccctcagtacttt
gatcttgatatctacaccaccagtcgacaggagaagaacttggagctgttgttgaggtac
ttacacgagatcatggagaaacacacagactctgaggttttggaggcggcttctaagtgc
tacgaatctctatgttccgaggaatttgccatcgctgggaagtgtgatgtggcaaggaag
actttgattgacagcctcattgccaagttcaaggaatccatgcacgatttcttcgcagag
ggtgaggaaccggatgatgatgagatctttgccctgctggcctgtctcaaacgtattgag
gctttgtacagttgtcatgatttaaatagctgggacatctgggatgatatatttcacatc
ataaagtcaggcaatgacagccagggaattcctgaagagattgtgtgtaaggccctggcc
tgtggtagccaggccctgctgtggtatctgaacaagctggatgaggcgaatccaaacaag
aacgagatgaagtctctgaggaagcgtctgaatgacatgatgaagtactgccatgatctg
ttgttccaccagcaggacaaagtcggagaggaggcttacatcacaatctgtgacctactg
gtcatgttcagccgccacctgggggagattaatgaggtcatgcggccgctggtgtacgag
ccggacaagaacctccagcagcagctcagcaacttcctgacggagaaagtcttcattgag
gacgacgacgatgacattgatgaaaatgtgaagatcgaggaactccacaagcgtcgtaac
tttctggcttcattctgtaaactggtcatctacaacatcgtccagatccggatggcagct
gacatgttcaaacactacatgaagttttacaatgactatggagatatcatcaaagcgact
ttgggtaaagctcgtgagatcaacaaggtgtcgacagccaaaacactggcactgagtctg
acccagctgtacaaggagctacagatggagatgggggcggtggaccggtcgtcagaggcc
ttccagtcactcaaggagttgtccagaaggtttgcgctgtcgtttggcttggatcaagtc
aagaacagggaggctgtggcagccatgcacaaagaaggcatcgtgtttagtctacatgtt
gacgaacatcacgacctcagcaccccaccccctaacctctccttcctagaggtcatctgt
gagttcaccaacaaactgatgaagcaggacaagaaagttgtgttacattacctggacaaa
cacctgcccggtgggatgatgccccagtctcggtccgaggagtggcagtccctgttcacc
taccgtaatagtctgtcccagggagacggggaggtccaccccatcaccctcaaacaggcc
acccagaggcgctacgccaacaaacgcaagcagatcgatgtgtctgaccacgactctaac
atgagcgactgggtggacatgtcggtaggaacacccgccccgggggtccctgtgatggcc
tcgaccgccatcaaacgacgtcgtatggacgaggagagcgtgggtggggcctcagagcag
tcagaggacttccaggaatcgtacattggtggggcccctcccacaccccacatgtcatgg
atgactgcacagaaaggacagactggtgcccagaggcatatggaggccgcgtacggacac
tacagacagggcggaaacttacctccaatggagacagaaggaagtgaggccagcatcgga
gactttgagagtccaaggtcacatgtcatgcctcctggttactatggtgacggcacacag
aacattgaggatccgtcgcattccggggtcattcatcacctgccccctgtacaggtgccg
tcagaaatgagtcaccatggatactag
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