Crassostrea gigas (Pacific oyster): 105338584
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Entry
105338584 CDS
T03920
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 38
KO
K11854
ubiquitin carboxyl-terminal hydrolase 35/38 [EC:
3.4.19.12
]
Organism
crg
Crassostrea gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
crg01002
]
105338584
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crg04121
]
105338584
Enzymes [BR:
crg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
105338584
Peptidases and inhibitors [BR:
crg01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
105338584
Ubiquitin system [BR:
crg04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
105338584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usp38-like_N
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
105338584
NCBI-ProteinID:
XP_034299818
LinkDB
All DBs
Position
LG7:6474605..6481403
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AA seq
929 aa
AA seq
DB search
MDAILNGILTSQHPDALKKQLITKVTENSSKPQPVRVIRSVLEISSSWFLQGESDIALTE
GLQVYMSWAKYNLTTFEAFFDREFLLSLFSYKGKHEANAVLLLEVSMELLQRSSSYSAHV
HVVEAKAISYVREHPSIDCLTNFVNFLFKFKECLPKGDFVSTFCVSLINSMSLCSISEDS
GPENVIVYIRNVDKICSLIHNLWNNADSEVILESLKAIFGLISALEETEPSICLGAVVRN
IPEEMIEIIVKYAINSDIDSARMTTALQRVVDWVQWPTATNVHLWIVRFFRSLAMAKKYS
ILIKVTENKIEQVCHNLKFVAVRDGAMSVLTQMLLGFQHSPEPFHKILPEIVKVIDILKT
ENETVLKQLSDLLHCCFFLHAGYPDLYDPILEALKGIPAPSAEEIKSRLEASQWLTQKSG
ASKYVSKVTQRSETGKTGLFNLGNTCFMNSIIQALFMCDSFRRDTLSYQATAEQPVISQL
QQVFAFLSQTQRPAYAPMTFSRMSRPSWFVAGHQQDCSEYLKYLLDQVHEQERSRQKKEK
LAQESKSANDGNQTDTDTATTVDSSKKSPVIRSLIEDHYGGMMVTTVTCLTCKTKSSRTE
EFNDIPLAFPEYKPIVNQDKGDESDTLPNTKCLHLNDLLQHYLKPEMLTGDNQYFCDKCG
SLQDAERKISITQPPEHLIISLLRFSYDPKIHARSKIFQEVKYPRTLIVPKDQTSETRSD
NPRRSLRSAVSRQIEKCGVNTTKGEVYGLNAVVVHSGTSSESGHYYTYARHSLFQDPEAV
MENLSECTDEDNIDFLQDKWYSFNDSRVSYAQYSSFCSVTQRFTKDTAYVLFYKRIDPQN
SENEGVDLNKSIKPAEVDPPLQDRLRQLVSKDNAQYLQEQEMSELKRASRKRPVSQTTSS
WFYKPDEDQGPPGSCGGSSFDSSGPRFVF
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggatgccatactaaatgggatactaacttcccagcatcctgatgctttaaagaaacaa
ctaatcacgaaagtaacagaaaacagctcaaagcctcagccagtacgcgtgattcgatct
gtgctagagatctcctcatcatggtttctacagggagaatcggacattgcattgacggag
ggtttacaagtgtatatgtcatgggcaaaatacaatcttacaacatttgaagctttcttt
gacagggaatttctgctctctctattttcttataaaggtaaacatgaggctaatgctgta
cttctgcttgaagtcagcatggaattgcttcagaggtcttcatcttactcggcacatgtc
catgtggtcgaggcgaaggcaatcagttatgtgagagaacatccatctattgactgctta
actaactttgttaacttcttattcaaattcaaggagtgtttaccaaaaggtgactttgtt
tcaactttctgtgtatccctaataaactcaatgagtctttgttctatttctgaggactca
gggcctgaaaatgtcattgtgtatattaggaatgtggataaaatttgttctcttattcat
aatttatggaacaatgctgactctgaagtgattctagaatcactaaaagccatttttgga
ttaatatcagctttagaagaaacagaaccttcgatttgtttgggtgcagttgtgcggaac
atcccagaggaaatgattgaaattattgtgaaatatgccataaattcagacattgacagt
gcaagaatgacaacagcactgcaaagagtggtggattgggttcagtggccgacggctact
aatgttcacttgtggatagtcaggtttttccggagtctggccatggccaaaaagtacagc
attctcataaaagtcacagaaaataaaattgaacaggtctgtcataatctaaagtttgtg
gctgtcagggatggagcaatgagtgtactcacccagatgttactagggtttcaacactca
cctgagccttttcacaagatattgcctgagatagtgaaagtgatagacatcttgaaaact
gagaatgagactgtattgaagcagctctctgatctgttacactgttgcttctttctccac
gcgggatacccagacctgtatgatccgatattggaggctctaaagggaattccagcccct
agtgcagaggaaataaaatctcgtttggaggcaagtcagtggctgacccagaaatcagga
gcatcgaaatatgtgtccaaagtcactcagaggtcagagaccggaaagacagggctcttt
aacctgggaaacacctgctttatgaacagtatcatacaggccctctttatgtgtgacagc
tttaggagggacacactgtcataccaagccaccgcagagcagccggtcatctcccaacta
caacaggtgtttgctttcctcagccaaacacagagacctgcctatgcccccatgactttc
tccagaatgtcacgacccagttggtttgtggcgggccatcaacaagattgctctgagtat
ctcaagtacttactggaccaagtccacgagcaggagcgatcacgtcagaaaaaggagaaa
ctagctcaggagtcaaaaagtgccaacgatggcaaccaaactgatacagacacagctact
actgtagatagttccaagaagtcacctgtgatacgatctttgatagaggaccattatgga
gggatgatggtgactaccgtgacttgtttaacctgtaaaaccaagtcctctcgtacagag
gaattcaatgatatcccgttagcctttccggagtataagccgatagtgaaccaggacaag
ggtgatgagtctgatacactgcctaatacaaagtgtttacaccttaatgacctgctacaa
cattacctgaagccagagatgttgaccggggacaatcagtacttctgtgataaatgtggc
tcacttcaggatgcagagaggaaaatctccatcactcagccccctgaacatttgatcatc
tccctactaaggttctcctatgatccgaaaatccatgccaggtcaaagatctttcaagag
gtcaaatatccacgtaccctgattgtacccaaggatcagacgtcggagactagaagtgac
aaccctaggcggtcactgaggagtgctgtgtcccgccagatagaaaaatgtggggtgaac
accacaaagggggaggtgtatggacttaatgcggttgtggtacactcagggacttcctca
gagtcgggccattattacacatatgcccgccattcgctgttccaggatccagaggctgtg
atggaaaatctgtcggagtgtacagatgaggacaacatagacttcctccaggacaagtgg
tactcgttcaatgatagccgtgtgtcgtacgctcagtacagctccttctgtagtgtcact
caacgcttcactaaagacacggcctatgttctcttctacaagagaatcgatccccagaac
agtgagaacgagggagtggatctcaataagtctataaaaccagcagaagtagatcctccc
cttcaagacagactgagacagctggtcagcaaagataatgctcaatacctacaggaacag
gaaatgtccgagctaaagcgtgcttccaggaagaggccggtctcccagaccacgtcttca
tggttctacaaaccagacgaggatcagggaccccctggcagctgtggggggtcctcattc
gacagtagcggaccaagatttgtgttttaa
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