Magallana gigas (Pacific oyster): 105338680
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Entry
105338680 CDS
T03920
Name
(RefSeq) putative Ras-related protein Rab-33
KO
K07920
Ras-related protein Rab-33B
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105338680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105338680
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crg04147
]
105338680
04031 GTP-binding proteins [BR:
crg04031
]
105338680
Membrane trafficking [BR:
crg04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab GTPases
105338680
Others
Specific organelles associated proteins
Auto phagosome
105338680
Exosome [BR:
crg04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
105338680
GTP-binding proteins [BR:
crg04031
]
Small (monomeric) G-proteins
Rab Family
Rab33
105338680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
MMR_HSR1
SRPRB
G-alpha
ATP_bind_1
PduV-EutP
TniB
FeoB_N
Motif
Other DBs
NCBI-GeneID:
105338680
NCBI-ProteinID:
XP_011442206
LinkDB
All DBs
Position
2:complement(45106310..45109744)
Genome browser
AA seq
243 aa
AA seq
DB search
MMSETHSASNSPSKDPSVTVIEKQTQRRIFKIIVIGDSNVGKTCLTYRFCTGKFPDKTEA
TIGVDFRERTVDVDGEQIKLQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDVTKMSSFEN
MPGWIEECDRHNLNLEIPRILVGNKCDMTDKVAVNTNLAQKFADSHTMPLFETSAKDEEK
ANHIDAIFLTLAHKLKNSKPMMSPFVGPGGYPNNVQVVTVGKSPESRGLQKMSTEDKQDQ
CSC
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcagaaactcacagtgcgtcaaattctccaagtaaagacccttctgtcactgtc
atagaaaagcagacacagagacgaatcttcaagattattgtaatcggagactccaatgtt
ggaaaaacgtgtctaacatacagattctgcacggggaaatttccagataaaacagaagca
actattggggtggattttagagaaagaactgttgacgtggacggtgaacaaataaagttg
cagctttgggatactgctggacaagagagattcagaaaatccatggtgcagcactactac
agaaatgtccacgctgtggtgtttgtatacgatgtcacgaaaatgtcttcctttgagaac
atgcctggctggattgaagaatgtgacagacacaacttaaacctagaaattcctcgcatt
ctagttggaaataagtgtgacatgacagacaaggttgcagtaaacacaaacctggcccag
aaatttgctgattctcataccatgccattatttgagacatcagcaaaagatgaagaaaaa
gccaaccatattgatgctatatttttgactcttgctcacaagttgaagaacagcaagcca
atgatgtctccgtttgttggtccaggtggttacccaaataatgtccaggtggtgacagtt
ggaaagtctcctgagtctcggggtttacagaaaatgagtacagaggacaaacaagaccag
tgttcgtgttaa
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integrated database retrieval system
