Magallana gigas (Pacific oyster): 105338683
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Entry
105338683 CDS
T03920
Name
(RefSeq) AP-3 complex subunit beta-2 isoform X1
KO
K12397
AP-3 complex subunit beta
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
105338683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105338683
Membrane trafficking [BR:
crg04131
]
Endosome - Lysosome transport
Others
AP-3 complex
105338683
Endosome - Golgi transport
105338683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP3B1_C
AP3B1_C_2
Cnd1
HEAT_2
INTS1_R4
HEAT_GCN1
BCD_RFX
Motif
Other DBs
NCBI-GeneID:
105338683
NCBI-ProteinID:
XP_011442212
LinkDB
All DBs
Position
6:complement(39979821..39991416)
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AA seq
1090 aa
AA seq
DB search
MTSNSFQLGGTGFGNDKAPSTGSGEGDFTNDPASSGFFSENFKRHEDLKAMLDGNKDNLK
LDAMKRIIGMVAKGKDASDLFPAVVKNVVSKNLEVKKLVYVYLTRYAEEQQDLALLSIST
FQRALKDPNQLIRASALRVLSSIRVLMISPIMMLAIKEAVMDMSPYVRKTAAHAIPKLYS
LDPESKEQLVEVIEKLLGDKTTLVAGSAIQAFEEVCPERIDLIHKNYRKLCNLLVDVEEW
GQVVIVGMMTRYARTQFVSPNQEGAGEDGKNFYESEEDEDEKEETEENEDEPKKKPYIMD
SDHRLLLRQTKPLLNSRNAAVVMSVAQLYHHCAPKSEVGVVAKALIRLLRGHKEVQYIVL
SNIATMTVARRDMFEAYLKSFYIRSSDPTHIKLLKLEILTSLATETNISVILRELQTYVT
STDKEFAAATIQAIGRCASNIAEITDTCLSGLVHLMSNRDESVVAESVVVIKKLLQMQST
GKGRKTTTEHKDIITHMAKMVDEITVPMARASILWLIGEYSERVPKIAPDVLRKMAKSFI
DEEDIVKLQILNLAAKMCITNSKQTRLLCQYVFNLAKYDQNYDIRDRSRFLRQLILPAEK
GPLAKHAKKILLASKPAPVLQSKFEDRDQYQLGTLSHILNNKTTGYKDLPEWPEEAPDPS
VRNVEIPVPEVTTKKSERKKATKDKSFYSESESSSEDEDSDEESDDSDEDEESEEESEEE
SDDEDESEEEDESEDSDIPQKNNAPPKQSAPKKAPKVEKSESEEEESSSEEESSSEESEE
EKPPPKSKASKKKPAKETKAANQNNTDLLLDIDLFGSSNGVTSSGGTQGSILTPSMASAM
SNLTISGASSTSSSNFVQPMNIPLKSYDLLNRMTGNGLGITYKFTRTISVFSPKMVSIEL
TLTNHGESPLSGIKVGKKTLQPGMEIQDFPEIASLGTGASTSVLMAINFNDTTQPAKFEI
CTLEQTFKVSITAPVGELLQPHTMGLQDFTQQQGKLKGMTENTGKVTLPKEKSDAKSVVT
NVLTVANMLQVPSSESDTVYRFAAKTMSEGVLVLVSVSVNEESANIVVNCEKMVIGTMLL
KDLKSLLAKS
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccaatagctttcagttgggtggtactggatttggaaatgacaaggccccgtct
accggcagtggagagggtgacttcacaaatgacccagctagtagcggtttcttttctgag
aattttaaacgacatgaagatcttaaagccatgcttgatggaaataaggataacctaaag
ctggatgctatgaagagaattatagggatggtagcaaaggggaaagatgcttcagatcta
tttccagctgttgtgaaaaatgtggtttccaaaaacttagaggtcaagaagcttgtgtat
gtctacctgacaaggtatgctgaggagcagcaggacctggccctcttgtccatcagcaca
tttcagcgagcactcaaggaccccaatcagctgatcagagccagtgccctgagggtcctg
tccagtatccgtgtcctcatgatctcccccatcatgatgctggctatcaaagaggctgtg
atggatatgtcaccgtatgtcagaaagacagcagctcatgccatcccaaagctttacagc
ctggaccctgaaagcaaggagcagcttgttgaagtgattgagaagttgctaggagacaag
accactttagtagctgggagtgccatacaagcctttgaggaggtatgtccagagagaatt
gacctgattcacaagaattacagaaaactgtgcaatctgttggtggatgtagaagaatgg
ggtcaagtggtcattgttgggatgatgactcgctatgctaggacccagtttgtctcgccc
aatcaagagggtgctggagaagatggcaagaatttctatgaatcagaggaggatgaggat
gaaaaggaggaaacagaagaaaatgaagatgagcctaagaagaagccgtacattatggat
tcagatcatcgcctgttacttagacagaccaaaccactgctcaacagtcgcaatgccgca
gttgtaatgtctgtggcacaactttaccatcactgtgctcccaagtcagaagtgggcgta
gtggccaaggctctgattcgcctactgagaggtcacaaggaggtccagtacattgtgctg
agcaacattgcgaccatgactgtcgcacggagagacatgtttgaggcttacttgaaaagt
ttctatataaggtcgagtgacccaactcacattaagcttctgaagcttgaaattctgacc
agtttagctactgagaccaacatttccgtaattctaagagaactacagacatacgtcacc
agtactgacaaggagtttgctgcagccactatccaggccattgggcgatgtgccagcaac
atcgcagaaatcacagacacctgtctcagtggactagtccatctcatgtccaacagggat
gagagtgttgtagcagagagcgtggtggtgataaaaaagctgcttcaaatgcagtcaaca
ggaaagggacgtaaaacgaccacagaacataaagacatcataacacacatggcaaagatg
gtggacgagatcaccgtccccatggcgagagccagcatcctgtggttgatcggggagtac
agtgagagggtgcccaaaatagcccccgatgttctcaggaaaatggccaagtcattcata
gatgaggaggacatagttaaattacagatccttaacttggctgccaaaatgtgtatcacc
aactccaaacagacccgcctcctgtgtcagtatgtgttcaatctagccaagtacgaccag
aactatgacatccgagacaggtctcgatttctcagacagctgattctccctgctgaaaaa
ggaccactagcaaaacatgccaaaaaaatactgctagcctcgaaacctgccccagttctt
caatcaaaatttgaagaccgagatcagtatcagctgggaaccctctctcacattctgaac
aacaaaacaacgggatacaaagacctcccagagtggcccgaggaagcacctgacccctcg
gtcaggaatgtggagatccctgtcccagaagtcaccaccaaaaaaagtgaaagaaagaag
gccacaaaagataaaagcttctactcggaatcagagtcaagctcagaagatgaagattca
gatgaagagagtgatgattctgatgaggatgaagaaagtgaagaggaaagtgaggaggaa
tcagatgatgaagatgaaagtgaggaagaagacgagtctgaggattcagacattcctcag
aaaaacaatgctcctcctaaacaaagtgcacccaagaaagcacccaaagtagagaagagt
gaaagtgaagaggaggaaagttcctctgaagaggagagctcctcggaggaaagtgaggag
gaaaaacccccacccaagtccaaggccagcaaaaagaaaccagccaaggaaacaaaagca
gccaatcagaacaacacagatttattactggatatagatttatttggatcttctaatggt
gtgaccagcagtggaggcacccaaggaagtattctgacccccagtatggccagcgccatg
agtaacttgacaataagtggggcatcgtctaccagttcttcaaattttgttcagcctatg
aacatccccctaaagtcctatgacctcctgaacaggatgactggcaatggactaggaatt
acttacaagtttaccaggaccatttctgtgttctctcccaaaatggtttccatagaactc
accttaacaaaccatggggaaagtccattatcaggcatcaaagtgggcaaaaagacttta
caacctggtatggaaatacaagacttccctgaaatagcatccctaggaacgggagcctcc
acctcagtccttatggccatcaatttcaatgacaccacacagccagccaagtttgagatt
tgtacgctagagcaaacatttaaagtcagtataacggctcccgtgggggaactactacaa
ccccacaccatgggcctccaggatttcacccagcagcaaggtaaacttaaaggaatgaca
gagaacacaggaaaagtaacattaccgaaggagaagtctgatgccaagtctgtggtgaca
aacgtccttacagtggccaacatgctccaggtgccgtctagtgaatcggacacggtctat
cgttttgcggccaaaaccatgagtgaaggagtgttagtgcttgtatctgtgtcagtgaac
gaggaatcggcaaacattgtggtcaactgcgagaagatggtgatcgggactatgttactt
aaagacctcaaatctctactggcaaagagctag
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integrated database retrieval system
