Magallana gigas (Pacific oyster): 105338718
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Entry
105338718 CDS
T03920
Name
(RefSeq) lysosome-associated membrane glycoprotein 1 isoform X1
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03272
Virion - Hepatitis viruses
crg03273
Virion - Lassa virus and SFTS virus
crg04140
Autophagy - animal
crg04142
Lysosome
crg04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
105338718
03272 Virion - Hepatitis viruses
105338718
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
105338718
04142 Lysosome
105338718
04140 Autophagy - animal
105338718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105338718
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crg04147
]
105338718
04090 CD molecules [BR:
crg04090
]
105338718
Membrane trafficking [BR:
crg04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
105338718
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
105338718
Other autophagy associated proteins
RNautophagy/DNautophagy
105338718
Exosome [BR:
crg04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
105338718
CD molecules [BR:
crg04090
]
Proteins
105338718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
PTS_EIIA_1
CTV_P6
DUF1694
Motif
Other DBs
NCBI-GeneID:
105338718
NCBI-ProteinID:
XP_065926498
LinkDB
All DBs
Position
8:16855650..16866928
Genome browser
AA seq
678 aa
AA seq
DB search
MKTNFIGAVVLCALISLTHGIEYQYQYDNNKTCIEVKTDVEFTLTNGNETIKFDGKDFNV
TSGDCASSGEAIASLMLTNVKKDSLSIIFQYDAQNQATMDVRFTFAPFEYFPETQPKDQI
QMIDNGDLILGEKTRLFKCNSSQRITLNGKLEDTIYTMYMDMSNTQIQAFDIVDGNLSSN
VFVCSADQMTTTAQNVSTEQVTTATSSGTTEATTATTEATTATTNVTAQTTPTTPNATSE
APTTNSTMEPTTKANTTSEGPTTAPTTAPTTAAPTPMPPKSTYKVMAGGKTCLIMEGSFR
MMVTINKTTIIVDVPSKEEVNVTGMCASGNETESSITITPKSGPLKSLTFDFKINKNKDM
ADKSELVSMNAEVMVDGKVEPISANKTLLVLSNPKLFYKCDVGSNFTADKVIFKYEQLKV
QAFNVENEKFAENGEDCSEDVGPIPAPGNIPVNMYAVTEGNKTCIVFKGSMKFVIPYVAK
SGNATEPVGLPEKFTVSGSCNFLLNGEVSQKMEVKFYEDWILTIYFTDSDNKTDVQNQLT
ADSSDKYYISQIELEYEYNSNLFVKADESILGKKAKFTAANLTLWETGKDKSYMCNKEST
INLSSKDGFELTVSKVQYQAFKKGNSNDFGDASECAADEETNSIVPIAVGAALAGLVIIV
LIAYLIGRKRSRAGYEQV
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgaatttcatcggagctgtggttttatgtgccttgatatcgctgacacacgga
atagaatatcaataccagtatgacaacaacaaaacatgtattgaggtcaagacagatgta
gagtttactctgaccaacgggaatgaaacaatcaagtttgatggaaaagatttcaatgtg
acaagtggggattgtgcatcatcaggtgaagcaattgcttctttaatgttaacaaatgtc
aaaaaggactccttgtccataatatttcaatatgatgcacaaaatcaagctacgatggat
gtgagatttacctttgctccctttgagtacttcccagagacacaacctaaagaccagatc
cagatgatagataatggagacctaattttgggagagaagacacgattgttcaaatgcaat
tcttctcagagaataactctgaatggaaaactagaggatacaatatataccatgtacatg
gacatgtccaacacccagatacaggcctttgatatagtggatggaaacctcagctctaat
gtgtttgtgtgtagtgctgaccagatgacaacaacggcacagaatgtatcaacagaacaa
gtcaccacagcaacaagtagtggcaccactgaagcaacaacagccaccactgaagcaaca
acagccactacaaatgtgactgctcagacaacgcctaccacaccaaacgccacgtcggaa
gctcccaccacgaactccacaatggaacctactaccaaggcgaacaccacgtcggagggt
cctaccaccgctcccactacagccccaaccaccgcggcaccaacaccgatgccaccgaag
tccacctacaaggtgatggcgggtggtaagacgtgtctcataatggaggggagctttcga
atgatggttactataaataaaacgaccataattgtcgatgtaccatcgaaagaggaagtt
aatgtcacaggaatgtgtgccagtggaaatgaaacagagtccagtattaccatcaccccc
aaatcaggcccacttaaatcattgacctttgactttaagatcaacaagaacaaggacatg
gctgacaaatcagagttggtgtcaatgaatgcagaggtcatggtcgacggtaaagttgaa
ccaatatcagcgaacaaaactctactagtattgtccaatcccaagttgttttacaaatgt
gatgttggaagtaatttcacggccgacaaagtgatcttcaaatatgaacaactgaaagtt
caagcttttaatgtggaaaatgaaaaatttgctgaaaatggagaagactgttcagaagat
gtgggtcctatccctgcacccgggaatatcccagtcaacatgtatgctgtgacagaggga
aacaagacttgtattgtatttaaaggatcaatgaagttcgtaatcccttatgttgcaaaa
tctgggaatgccacagaacctgtgggtctgcctgaaaaattcacagtttccggaagctgt
aattttcttttgaatggagaagtgtctcagaaaatggaagtaaagttctacgaagactgg
attttaaccatttactttactgatagtgacaataaaacagacgtccagaaccagttgaca
gcagatagttccgataagtactacatctctcagattgagttggaatatgaatacaacagc
aacctttttgtaaaagctgatgaaagcattctgggaaaaaaagctaagtttactgctgcc
aacctcactctatgggaaacaggcaaagacaagagttacatgtgtaacaaagaatctact
ataaacctcagtagtaaagatggatttgagctgactgtcagtaaggttcaataccaggca
ttcaaaaaaggaaactcaaatgactttggagacgctagtgagtgtgcagcggatgaggag
acaaatagcatcgtaccaattgcagtgggagccgcccttgctggactcgtcattatcgta
ctaattgcgtatttgattggacgaaagaggagccgcgcgggctacgagcaggtctag
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