Magallana gigas (Pacific oyster): 105338838
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Entry
105338838 CDS
T03920
Name
(RefSeq) ATP-dependent RNA helicase DDX19A isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03013
Nucleocytoplasmic transport
crg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105338838
03015 mRNA surveillance pathway
105338838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crg03019
]
105338838
Enzymes [BR:
crg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105338838
Messenger RNA biogenesis [BR:
crg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105338838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
105338838
NCBI-ProteinID:
XP_065936139
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Position
3:complement(47204372..47218739)
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AA seq
530 aa
AA seq
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MADLDWGAAVDTQEQTLTSQTTGTGEQSINWAEEVEKSNLTEEINRIAIDKNRSPSKSPS
APSQNAPTQTSHPPAHQGAGAMAAAPPPAQVGAGASGDEDENAATKEDSALLRKLIHSKL
VSTKADLEVLQKDPNSPLYSVKSFEALNLKKELLDGIYSMGYNTPSKIQETALPVLLADP
PVNMIAQSQSGTGKTAAFVLTMLSRVDTNQPYPQCLCIAPTYELALQIGKNVEDMGKFMK
DLQIIYAVRGERLDRGTKLNGHLIIGTPGTVCDWALKLRFFDLKKINVFVLDEADVMIAT
QGHQDQSIRIQRGLRKDCQMLLFSATYEEEVMRFAQAVIPNNPIVIRLRREEQSLDNIKQ
YFIECADAEGKFQALSNIYGSISIGQSMIFCATRRTAAWLAEKMTKEGHAVGLLSGDLSI
EQRAAIINRFKDAKEKVLITTNVTARGIDVEQVTVVVNFDLPLTQDHKPDFETYLHRIGR
TGRFGKKGLAINMVDSRQSFATLKAIEKYFGRKVEKLDAEDMEEVEKIGS
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagacctagattggggagctgctgttgacactcaggaacaaacactgacaagtcag
accacaggaactggagaacaatccataaactgggcagaagaagttgagaaaagtaactta
acggaagagataaacagaatagcaattgacaaaaacagatccccttccaaatctcccagt
gcaccctcacaaaatgcccccacccagacaagtcaccccccagcccaccaaggggctggg
gcaatggctgctgcccctcccccagctcaggtgggagcaggggcatctggagatgaagat
gaaaatgctgccaccaaagaagattcagccctcctcaggaagctgatccactcaaagctt
gtgtcaacaaaggcagatttagaagttctgcagaaagatcccaattctccactctactct
gttaaatcatttgaagcactaaatctaaagaaggagttattggatggaatctacagcatg
ggatacaacacaccatcaaagatccaggagactgccttaccagtcctgctggctgacccc
cctgtaaacatgattgctcagagccagagtgggacagggaagacagcagcctttgtgttg
accatgttgagtcgagtcgacaccaaccagccctacccgcagtgcctctgtattgctcct
acatacgagctagctttgcaaataggaaaaaatgtagaagatatgggaaagttcatgaaa
gacctgcagatcatctatgcagtcagaggagagcgattggacagaggaacaaaactaaat
ggccatttaatcataggaacccctgggacagtttgtgactgggccctaaagttacggttc
tttgacctcaaaaagatcaatgtatttgtgttggatgaagctgatgtgatgatagctaca
cagggccatcaggatcagtccatcagaattcagaggggtctacgtaaggactgtcagatg
ttgttgttttctgccacgtacgaggaggaagtcatgagatttgcacaagctgtgataccc
aacaacccgatcgtcatacgtctacggcgagaggaacaatccctggacaacatcaaacag
tacttcatcgagtgtgcggatgcagagggaaagttccaggccctctccaacatctacgga
tccatatcaataggacagtccatgatattttgtgcaactagacgaacagctgcttggctg
gcagagaagatgacaaaggaaggtcatgcagttgggctcctgagtggagatctgtccata
gaacagagggctgccatcattaacagatttaaagatgccaaggagaaagttctcatcacc
accaatgtgacagccagaggtattgatgtggaacaggtcacagttgttgtgaactttgac
cttcccctgacccaagaccacaaaccagactttgagacgtaccttcacagaataggaaga
accgggcgttttggcaagaagggcttagcaattaacatggtggatagtcgccagtctttt
gctacattgaaagccatcgagaaatattttggtcgtaaagtagagaagctagacgctgaa
gatatggaagaagtggagaaaattggaagttaa
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