Magallana gigas (Pacific oyster): 105338842
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Entry
105338842 CDS
T03920
Name
(RefSeq) nuclear receptor subfamily 2 group C member 1
KO
K08526
retinoid X receptor gamma
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crg03000
]
105338842
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
crg03310
]
105338842
Transcription factors [BR:
crg03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
105338842
Nuclear receptors [BR:
crg03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
105338842
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
105338842
NCBI-ProteinID:
XP_011442427
UniProt:
K1Q6C5
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Position
3:47103496..47107534
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AA seq
468 aa
AA seq
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MFDLTVGTMSQCYDRGSICACPPVAYEPHKMQRLMPRHNLFYPLDSSPNQPNLLQSNTSA
PVMDCETKQSNTLQSVLLGKVPAAYSHLTSHRKSPYQLSPPHCASSPRRSPHSPSSFLNI
PSRTSPIGSPQSFQISQEVPFSRQFSPQCPIISSPHRSSPHHMPSPRLMPSPHPSLSPRH
SISPASSSSTEICQDEPIDLSCKVIKEEENNTPSGEDKDNGGFSLLRNLLCVGKNNQTNS
PKSPDSGSEHGDSESCVGVHVTGTTPVTLAKKNMYPVGSRVSDWLVKIIQFAKSIPEFVN
LSHNDKVTLILNSWTRLLLLYMSESNFQFAVTPIHSEQQSEESGGDPPPSQPTMKSVENL
QGFVRKCQTMNLDQKEYAFLRMAVLFNSGYVGLDRPDQVEQLNSLIQQLLQEHARSTRPT
DHLHYSRVLLCLPALYGINCKMIENLFCKHINGNMDIDVLLKEMLQNL
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacttgactgttggaactatgtctcagtgctacgaccgaggatcaatctgtgca
tgtcctcccgtggcatacgaacctcacaaaatgcagagactcatgcccagacataattta
ttttacccattggattcttcaccgaatcagccaaacttgttacaatcaaatacctccgct
ccagtaatggactgtgaaacaaaacagagcaacactttacaaagtgtgttactggggaaa
gtcccagctgcctactcccatctgacctcacacaggaagtctccttatcaactcagtcca
ccccactgcgcctcgtctccccggcggagtccccacagtcctagctcatttctgaacatt
ccgtctcggacttcacccatcgggtcaccgcagtcgttccagatttctcaggaggttcca
ttttcacgtcagttttctccacagtgtcctataatctcgtcgcctcatcgctcatcccct
catcatatgccatcacctcgcctgatgccttcaccgcacccctccctatcgcctcggcat
tcaatctcgcctgcttcatctagttccacagaaatttgtcaagacgagcccattgacctg
tcttgcaaagtgatcaaggaagaagaaaataatactcctagcggtgaggacaaggacaat
ggcgggttctctttattgaggaacctactgtgtgttggaaaaaacaatcaaacgaattcc
cccaaatctccagactcgggcagcgaacatggcgacagcgagagttgtgttggggtccat
gtaacggggacgacgcccgtcaccctcgccaagaaaaacatgtatcccgtggggtcgcgg
gtgtcggactggcttgtgaaaatcatccaatttgcaaaatccattccggaatttgtcaac
ctctcccacaatgacaaagtgacattgattctgaactcatggacacggcttctgctactg
tacatgtcagagagtaactttcagttcgctgtgacccccattcattccgagcagcagtcg
gaggagtccggcggcgaccccccgcccagccagcccaccatgaaatcggtggaaaatctt
cagggcttcgtccgcaagtgccaaaccatgaatctggatcaaaaagagtacgctttcctc
agaatggcagttttgtttaattctggctatgtggggttggacagaccagatcaggtagaa
caactcaactccctcatccagcagctcttacaggaacacgcccgttccacccgcccaact
gaccacctccattacagccgggtcctgctctgtctcccagctctttatggcattaactgc
aaaatgatcgaaaatctcttctgcaagcatatcaacggaaacatggacatcgatgttctc
ttgaaagaaatgttacaaaacttatag
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