Magallana gigas (Pacific oyster): 105338959
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Entry
105338959 CDS
T03920
Name
(RefSeq) TBC1 domain family member 5 isoform X2
KO
K18469
TBC1 domain family member 5
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105338959
Membrane trafficking [BR:
crg04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
105338959
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Fez1
Motif
Other DBs
NCBI-GeneID:
105338959
NCBI-ProteinID:
XP_019927262
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All DBs
Position
5:complement(18415085..18438254)
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AA seq
826 aa
AA seq
DB search
MWSMRKKEAATAQPSQGRGPSPPTKEDILSTLENFGDSTDPEKESNNNKQPSRQQSEDSL
DDWEKPDPPSASTFNSYSAEWEKLFKRKNYRKQLRLYAMNGNLRSSRFRSVCWKVFLDVL
PDDIHHWKNSCRKSRSKYTDLKDRLIVNPRKAVDCSASDLALNNPLSQADESPWNQFFLD
NELRLTIKQDVIRTFPEVEFFHKEAIQEMMLDLLFCFCKTYPELSYKQGMHELLAPLIFI
LHCDHQAFLHAAEVETLDQINEPDRDIVKEIMDPAYLEHDAYALLSQIMRTVEPWYNARD
IPVNRSKDKLNSVPFARPQDLNSSNAIVTKLTRIQDYILKRFDVELHGHLERLEIAPQIY
GIRWIRLLFGREFPMQDLLALWDAIFADGVGFELVDFVFVAMLLYIRDLLLSSDYPQCLT
CLMRYPPVPDIGYLIEKAQYLREPKHFPRPPHYSYQTVNNVKSPVSQKPPPQASSNSTTS
TNTSTSTYKHHRTGSMTSSFSEFSRKMRPKTLQMDGNKPSIYKSSSVPMNLQTDISPGTP
QYPQHKRGSSASLSQVEDAMFKQTPSPSSMARLEPTNDRFANMTLYNQEDGSMNGNVAKF
STLPNLKGKGKKLSKQMAELEHRMGELQGQINEKESMSLYCANKLDSHIKRLQFEVLHQS
LENEDEILLAIAGIKQVRDVLKGTLKFSQMDEEDVTIKDDYYEPENNSATSPENHEPLPQ
EKPRSRSHSKKSGIFYMSSEDNSENAESPPEGPIQAVTPRKGSIQKEAHNHKEDNKAFEL
SDRVLPGTGHGKSGIQSQPVDVSEKTHPLDSSPNPLYNYKCSVDSV
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcaatgagaaaaaaggaggcagcaacggcccagccctcacaggggaggggtccc
tcaccccccaccaaagaggacattctcagcaccctggagaactttggggacagtactgac
cctgagaaagaaagcaacaacaacaaacaacctagccggcagcaaagtgaggacagcttg
gatgactgggagaaacccgacccacctagtgccagtaccttcaattcctacagtgcagaa
tgggagaagttattcaagagaaagaattatcgcaagcagctcaggttgtatgccatgaat
ggaaatttacgcagcagtcgtttccgctccgtgtgttggaaggttttcttggatgtttta
ccagatgacatccaccattggaagaacagttgtagaaaatcaagaagtaaatacaccgat
ttaaaagacaggctgatagtgaaccccaggaaagctgtcgattgcagtgcctcagatcta
gccctcaacaaccccctgtctcaggctgacgagagtccttggaaccaatttttcttggac
aatgagctgagactgaccatcaaacaagatgtcatcagaacttttcctgaggtagaattt
tttcacaaggaagccatccaagaaatgatgctagatcttctgttctgcttctgtaaaacg
tacccagaactttcatataagcagggaatgcatgaactgctggcaccattgatattcata
ctccattgtgatcaccaggcatttctccacgctgcagaggttgaaacgttagaccagata
aatgagccagacagggatattgtgaaggagatcatggaccctgcttatctcgaacatgat
gcttatgccctgctgagtcagataatgcgcactgtagaaccatggtacaatgccagggac
attccagtcaacaggagcaaggataagctgaactccgtcccctttgcgcgcccccaggac
ctgaactcatccaatgccatagtgaccaagctgactcggatacaggactacatcctgaag
aggtttgatgtagagctgcacggacatctagagagactggagatagctccacagatctat
ggaattcgctggataagacttctgtttggacgggaattccccatgcaggacctcctggct
ttgtgggatgccatctttgcggacggtgtgggatttgaactggtggactttgtgtttgtg
gccatgctgttgtacataagagatctattgttgtccagtgattacccacagtgcctcacc
tgcttgatgcggtaccccccagtgccggacataggttacttgatagagaaggcccagtac
ctgagagaacccaaacacttccctcgaccacctcattacagctaccagactgtaaacaat
gtcaagtctcctgtctcccaaaaaccacccccacaggccagctccaactccacaacctcc
actaacaccagtactagtacttacaaacaccacaggactggaagcatgacatctagcttc
tctgaattctcacgcaaaatgagacccaaaactttacaaatggatggaaacaagccatcc
atttacaaatcctctagtgttcccatgaatctccagactgatatctcgccaggaacccca
cagtacccccagcataagagaggatcttctgctagtctgtctcaggtggaagacgccatg
tttaaacaaaccccgtcgcctagcagcatggcacgcctggaaccaaccaatgacagattt
gctaacatgacactttacaaccaagaggatggttcaatgaacggcaatgttgctaaattc
tccacattaccaaatttgaaaggcaaaggaaagaagttatcaaaacaaatggctgagttg
gagcataggatgggggagcttcaaggacagataaacgagaaagaatccatgtctctgtac
tgtgccaacaaactggacagtcacatcaagcgacttcagtttgaggtactacatcagtca
ctggaaaatgaggatgaaatactgttagccatagcaggaataaaacaggtcagagatgtt
ttgaagggaactctcaagttttctcagatggacgaggaagatgtgacaataaaagacgat
tactatgaaccagaaaataacagtgccacttctcccgaaaatcatgagccacttccgcag
gagaaaccaagatcaaggtctcacagtaaaaagagtggcatcttttacatgagtagtgag
gacaattctgaaaatgcagaatcccctccagagggccccatccaagcagtgacccctagg
aaagggtcaattcaaaaagaggctcataatcacaaggaggataataaggcatttgaactg
agtgaccgtgttttaccgggaactggccatgggaaatctgggattcagagccaaccagtg
gacgtgtcagagaaaacccatcccctggattcaagtccaaatcccctgtacaattacaag
tgttcagtcgattctgtgtaa
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