Crassostrea gigas (Pacific oyster): 105339012
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Entry
105339012 CDS
T03920
Name
(RefSeq) codanin-1
KO
K19531
codanin-1
Organism
crg
Crassostrea gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
crg03036
]
105339012
Chromosome and associated proteins [BR:
crg03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
105339012
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Codanin-1_C
Motif
Other DBs
NCBI-GeneID:
105339012
NCBI-ProteinID:
XP_011442695
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All DBs
Position
LG3:complement(36307270..36321383)
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AA seq
1486 aa
AA seq
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MASILEYILSGELPVDTLVSFLKRNPTNEIVTQKENIPIQLTEFNHLHQEFIPFFLNYLR
DQTIHLLQNSKSTTPSPAKTPSAQKLKKCVDEKKSSSSSSKRVQLFGASPGDGIDDIKPT
SGSFFSPNTSTEFRTPTLKTPSNQDNGGKGDRKAGAVCIGESVKSQSFPAGRNSVEKDHK
SRGSKSNTPHSGSKSNQDGRSRHRFSLGEFIVSPEVSNSSGKKKNSPFSSGRKNERCTDN
TPSPITTQVKSGHKKRHSVESEYRNFIQTAPVFSLGSTDEFPPVGGDGKPVTPRMHDLAG
DKGNLTNMILRNSPNFDNTPRALKSNPITKSRRISFTTVSAGQQEGSTESTNAPSRRINP
TPVSGKPFRRQTNAFIEQESTENKESSPGGDSSHLEEERELLRREKAKRLQSKAENKSEG
LEFLSCNTPTKLLDRSVSTVDIVVADIAEVTHRIELDKLVHLYSACLSENLFPNLTMELY
FLMQLLTSRSIDMELIAVCGEDVLENNFFSTVHNAVFFAVSVMTQQKRLLQCLDKGTLRL
LSENTRITQFSPDLNSWLSDILDSKNQQFGPVYPKSPIGSVSFQAETDNRKNFPDDRTFH
LFKRQRDGFYEILRLWERQHMTPGWSVSEALGDRIRALVSAKTELSNHLHFARLFQSQLI
AMCKGDSSVMVETGDENIALLNQLKRSNPEKFKKLQERFFKPLSFGGPCPVPAFPGCQEF
FHDFIIAASSTIFNQHLSDTFASKILELNSLNFISEEETGNEDSDDELKEVFISNLFTLR
LLGKFLGFITFLPYRTTTKLPDEMEATYLSIRKNHLPYLDLVECIKEALTLSRLTLTVPW
VVEFLSMMDVVAPKIDHFQLTLYLLLVIHRACWRDLDRGSYGYLLIVTMISWLLDISVIP
EGFFFVEIPVHVFEIVSSVKQKSTTHLDSIGFVDQSVYYSCCPYLLELRTLLTEFAVGSS
SKTSTIRKITPISAEDTSVHKPSDVQIQLQLEENFFHNHPASLRRCVDFVAERTASNFIK
KFRTSSLQTLLTQSREALNTHLMAQAGGSPSGKAKDKLQHDILKIAQDHVAQAKAVVAKD
VGSYCEGRIKALVLLLLPDEQSESVKQTATEISTRLSQEKVHSWINKHITVQMFQSELSL
ELDRILKSQLLNQTRSVSGPAEISVSGNPVESGFEVIAKEHDDSTRFPSDVLIDIKDMVK
LVILKNVSPEKIAVKNLLVETKTILEKRQDWLPGIFRSFGQLILDLCLSLMCYFPEDWTV
EDLDEFEVLWTGSLKSAIPFSSAVNSYTLKLLEDSPKPKFAWMNFEELLLMFLRLSLLST
SDLQQSCLNVLSGTQDYVENLAVCLCHIVEKLETDPDHCTDECELGDVLEWIYQVCGAEA
PVSHLILQTLKLDSPPGHESGGSVTDHSPIRLDSRSDSSSETDKVHGKDRPSNSESNLVE
CLHKNKKLCSEMNKCSNNCCERMDGIHVKLDGLSVSMQDLDVSVPK
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaatattagagtatattttgagtggagagcttccagtggacaccctggtgtca
tttttgaaaagaaacccaactaatgagattgttacacagaaggagaatattccaattcaa
ctgactgagttcaaccatttgcatcaagaattcattccttttttcttgaattatctacgg
gatcaaacaatacatcttctacagaactcaaagtcaacaacaccatcacctgctaaaacc
ccttcagctcagaagttaaagaaatgtgtcgacgaaaagaaaagttcttcgtcatcatca
aagagagttcagctttttggtgcaagccctggcgatggaattgatgacataaaaccaacc
agtggctcatttttctcccctaacacatcaactgagtttagaacacccactttgaaaaca
ccttcaaatcaagataacggagggaaaggagacagaaaagcaggagctgtgtgcataggg
gaatctgttaaaagccagagcttccctgcaggacggaattcagtggagaaggaccataaa
tctaggggtagtaaaagcaatactccacatagtggaagcaaaagtaatcaagatggcaga
tcaagacatagattcagtcttggagagttcatagtgtccccagaagtatcaaactcttca
gggaagaagaagaattctcctttttcttctggcagaaaaaatgagaggtgcactgacaat
actccttcacctattaccactcaagtaaagtctggccacaagaagcgtcattcagttgaa
tctgaatatagaaattttattcagacagcccccgtgtttagcttgggtagtacagatgag
tttccacctgttgggggagatggtaaaccagtcacaccgagaatgcatgaccttgcaggg
gataagggcaatctaactaatatgattttgagaaattccccaaactttgacaacactcct
cgagcactgaaatctaatcctatcacaaagtctcgtagaattagcttcaccaccgtgagt
gctggtcaacaagaggggtccacagagtcaactaacgctccctcaagaagaatcaaccct
acccctgtctcggggaagccttttcgcagacagacaaatgccttcatagaacaagaatct
acagaaaacaaggaaagcagtcctggtggtgactcaagtcacttggaggaggaaagagaa
ttactcaggagagagaaagccaagcgtcttcaaagcaaagctgaaaacaaatctgagggc
ctggaatttctgtcctgtaatacacccaccaagttattggatcgctctgtgagcactgta
gacatagtcgtggccgacatagctgaggtcacacaccgaattgaattggataagttagta
catctgtactcagcctgtctcagtgaaaatttatttcccaatctgactatggagttgtac
tttctgatgcagttgttaacctcacgcagtattgacatggagcttatagctgtgtgtggt
gaagatgtgctggaaaacaatttcttttccactgttcataatgctgtcttttttgctgtt
agtgttatgacgcaacaaaagaggctgctacagtgccttgataaaggaacactaaggctt
ttgtcagagaacacaagaatcacgcaattctctccagatctgaacagttggttgtcggac
attttagacagcaagaatcaacagtttggtcctgtataccctaagtctccaattggaagt
gtgtcattccaagcagaaacggacaacaggaaaaacttcccagatgacagaacatttcac
ttatttaaaagacaaagggatgggttttacgagattcttcgtttatgggagcgacaacac
atgacccctggctggtccgtcagtgaagccctcggagacaggattcgggctctggtcagc
gccaaaacagaactctccaatcaccttcactttgccaggctgttccagtcccagcttatt
gctatgtgtaaaggggatagcagtgtgatggttgaaactggagatgaaaacattgccttg
ttgaatcagttaaagcgctccaatccagaaaagtttaaaaaattacaggagagatttttc
aagcctctgagtttcggtggaccctgccctgtacctgcattcccagggtgtcaggaattc
ttccatgactttatcattgccgcctccagcactattttcaatcagcacctgagtgatacc
tttgcttccaaaatcttagagttgaactctcttaactttatatctgaagaagaaacagga
aatgaagattctgatgatgaactaaaagaagtctttatttccaatttattcacgctgaga
cttttgggaaagtttctcggctttataactttcctaccgtatcgaacaaccacgaaattg
ccagatgaaatggaagcaacatatttgtcgatcaggaaaaatcacttgccatacctggac
ttggtggaatgtatcaaagaggccctgaccctcagccgtctgacccttactgttccctgg
gtggtggaattcctcagcatgatggatgtggtggctcccaaaattgaccattttcagctg
acactgtatttactgttggtcattcacagagcttgttggagagacttggaccgaggcagt
tatggctacctgctcatagtaacaatgattagctggttgttagatatatctgttatacca
gagggcttcttctttgttgagattcctgttcatgttttcgagattgtgtcatccgtcaaa
cagaaatccacaactcacttggatagcattggatttgtggaccagagtgtgtattactcc
tgttgcccatacttactggagctaaggaccctgttgacagagtttgcagtgggaagcagc
agtaaaacttcaaccatcagaaaaatcactcccatctctgcagaagacacaagtgttcat
aaaccatcagatgttcaaatccagctacaattggaggagaattttttccacaaccacccg
gcctctctacggagatgtgtggactttgtggcagagaggaccgcctccaacttcatcaag
aagttccgcacgtcctcgttacagactctcctcacccagagtcgagaggcgctgaacacc
cacctcatggcccaggctggcgggtctcctagcgggaaagccaaggataagttgcaacat
gatatattaaagattgcacaggatcatgtcgcccaagccaaggcagtggtggctaaagat
gtgggcagctactgtgagggtaggatcaaagccctggtactgttgctactgccggacgaa
cagtcagagtccgtgaaacaaaccgccacagaaatctccactcgcctgtcccaggaaaaa
gtccactcatggatcaataaacacattactgtccaaatgttccagtcagagctctctctg
gagttggacaggatattgaaatcccagctactcaaccagactcgttctgtcagcggccca
gcagagatttctgtgtcagggaatccggttgaatctggttttgaggtcattgccaaggag
catgatgatagcaccaggtttccctctgatgtacttattgacatcaaagatatggtgaag
ttggtcatacttaaaaacgtcagccctgaaaaaatagctgtgaagaacctcttggtggag
acgaaaaccattttagagaaaagacaggactggcttccaggaatcttcagatcttttggc
caacttattcttgacctctgtctttcattaatgtgttattttcctgaggattggacagtt
gaagatttggatgagtttgaggtgctgtggacgggctccttgaaatccgccattccattc
tcctcagctgtcaatagttacaccctcaaattgcttgaggattctccaaagccaaagttt
gcctggatgaactttgaggagctgcttttgatgttccttagactttcgttactgagcacc
agtgatctgcagcagagctgtttaaatgtactgtctggaactcaggactacgtagaaaac
ttggcagtctgtctttgtcacattgtggaaaagctggaaacggatccagatcattgtaca
gacgagtgtgagttgggagatgttctggagtggatctaccaagtttgtggagcggaggcc
ccagtgtcacatcttatacttcagactcttaagttagattccccaccaggacacgagtca
ggtgggtctgtaacggaccacagtccgattcgcttggattcgagatctgatagttccagt
gaaactgataaagtccatggtaaagacagaccaagtaattcagaatccaacttggtggag
tgtttgcacaagaataagaaattgtgttctgagatgaacaaatgttcaaacaattgttgc
gaacgaatggacggcattcatgtgaaacttgatggcttgtctgtttctatgcaagacctt
gatgtttcagtgcccaaataa
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