Magallana gigas (Pacific oyster): 105339015
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Entry
105339015 CDS
T03920
Name
(RefSeq) protocadherin-7
KO
K16498
protocadherin delta 1
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
105339015
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
crg01009
]
105339015
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
crg04515
]
105339015
Protein phosphatases and associated proteins [BR:
crg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105339015
Cell adhesion molecules [BR:
crg04515
]
Cadherins
Protocadherins
105339015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_pro
Cadherin_2
TMEM154
EphA2_TM
Fibulin_C
DUF6377
DUF6249
Baculo_11_kDa
Motif
Other DBs
NCBI-GeneID:
105339015
NCBI-ProteinID:
XP_065932910
LinkDB
All DBs
Position
2:complement(46027204..46051987)
Genome browser
AA seq
1024 aa
AA seq
DB search
MEMLYILLSIFSSAIAQSLVTFTIKEDTPRLHSVGSIPDAFNLTADLSRDQFDSLRYQFL
TNPENLFDIGNISGELRTNTSIDRESVCEFQADCQKDLAVTVRSKAFSYTKIFNVRVIIE
DINDNSPVFEPSSLRLAIPEHSSIGTSYKIHSATDKDVGINSIQSYQIIPENGPFGLNVT
KSLDGSFFVRVVIKQILDREIKNYYQFNIRALDGGSTPNVGVLTVNVDILDINDNSPVFT
HTSYNKSVQENVTVGTNILQCVATDKDTLDNGKVSYRFSLRSDLEALKSKFSINAETGQI
QVISQLNYGEQNLYEFFIEAFDHGEEVRVSQAKVTINVLDAGNNAPNMHVTFFEGGNGNE
SVSIKEGTKEDVSIAHIKVGDNDPGQNGQVDCSISNPAFGLQEMGSSGYVVVIKSSLDYE
TVKSYQVTVTCQDQGSPSMSSTKSFTVNIVDDNDNAPKFVQRIYQAYIPENKPSGMKVAE
VLAKDSDSGVNAVIRYSLDGDYGLVIDSTSGVIVTSRPLDREATPQITVRVLAVDQGNPP
LTGTTSLFVNVQDVNDNAPRFNVTQYSFNVYENMNNIKVGTVHAVDLDTDLNGQILYTVN
DDTFEIRGDGTIFTRRPLDYEAKRVHTFTVTARDQGEQVQSTNINVIVHVIDTNDNTPKC
VFPDEYNHTVSLPYLTKIGSLITTVQAYDADSGRNSHLSFQILSGNGHQTFKLDSNSGEL
FYDNTFIIRKDSVFRLNISISDQGEPSLSSTCVLEVMLTHTNMSMNPFSDDDANNKYVVI
CVIVVIITIFFSTVLITVIIIIRRNDRRNRERKAEQEKMRNLQQFQGIDKRYYQNQTPTF
PEDLSKKKKKEVSFSLEDDLDKSLDISGHSILDDQRFNLYHPGPEQDKLKHFDQFLINPN
ADNRKNNLLKGSHDSSSDTSTDLTASDSGRGGSDVEMHHSSNAPDEEKTYNLSNPYTRAS
SFPPTVYTPPDRGGTRASNKADNSASNKKDYTGLTPRETFEKKHGINRHSQESTKSESCL
PSYV
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atggagatgctatacattctgctgagtattttctcctcggccattgcacagagtcttgtg
acttttacaatcaaggaggatacacccagacttcactctgttgggagtattcctgatgct
ttcaatttaacagcagatctctccagagaccagtttgattccctgaggtaccagttcctg
acaaacccagaaaacttgttcgatattgggaatatttccggtgaacttcggaccaacacc
tccattgaccgtgagagtgtttgtgaattccaagcagactgtcagaaagatcttgcagtg
actgtcaggtcgaaagctttttcatacacaaaaatctttaatgtacgagtgattattgaa
gacatcaatgataattctccagttttcgagccatcttcccttcgtcttgcaattcctgaa
catagcagtattggaacatcctacaaaattcacagtgctacagacaaagatgtgggaata
aactccattcaatcttaccagatcataccagaaaacggaccctttggattgaatgtgaca
aaatctctggatgggagtttctttgtccgtgttgtgataaagcagattttggacagagag
atcaagaattactaccagtttaatatccgggctctggatggcggatccactcccaatgtt
ggagtcctgacagttaacgtggatattttggatatcaatgataattcaccagtgttcaca
catacatcttataataaatctgtccaagaaaatgtgactgttggaacaaatattctacag
tgtgtggcaacagataaagacactctcgataatgggaaagtttcttaccgattcagtttg
agatctgatttagaggcattgaaatccaaatttagtataaatgcagagactggacaaatt
caagtgatttctcagttgaactatggtgaacagaatctttatgaattcttcattgaggca
tttgatcatggtgaagaagttagagtgtctcaagctaaagttacaataaatgtattagat
gctggcaacaatgctcccaacatgcacgtaacattctttgagggaggaaacggaaatgag
tctgttagtatcaaagagggaaccaaagaggatgtctccattgcccacattaaggtgggg
gacaatgatcccggtcaaaacggacaggtggactgctccatatcaaatccagcttttggg
cttcaagaaatgggatccagtggttatgtggtagtgatcaagtcgtccctggattacgag
acggtgaagtcctatcaagttactgtcacctgccaggatcaaggctctccctctatgtca
tccaccaaatcattcactgttaacatcgtggatgacaatgacaatgctcccaagtttgtt
cagagaatctaccaggcatacatcccggagaacaaaccttcaggcatgaaggtggctgaa
gttcttgccaaggattccgactctggagtcaatgcagtaatcaggtattccttggatggt
gattatggattggtcatcgattccacttctggagtcatcgtcacgagccgtcccttggac
agggaggccacccctcagataactgtcagggtcctggccgtggaccaagggaacccccct
cttacaggcaccacctccctctttgttaatgtccaggatgtaaacgacaatgccccaaga
ttcaatgtcactcagtacagttttaacgtgtatgaaaacatgaacaatattaaagtgggc
acggtccatgctgtggaccttgatactgatttgaacggtcagatcttgtataccgtgaac
gatgatacctttgaaataagaggtgatgggaccatattcaccaggagacccttggattat
gaagctaaaagggtccatacattcacagtgaccgcaagagaccaaggcgaacaagttcag
tcaacgaatatcaacgtgatagtccatgttattgataccaatgataatactccaaaatgt
gtcttcccagatgagtataaccataccgtcagtcttccatacttaaccaagattggttct
ctcatcacgactgttcaagcttatgatgcagactctggacgaaacagccaccttagcttc
cagatcctcagtggaaatggacatcagacatttaagctggattccaactctggagagctt
ttctatgacaatacttttattataagaaaggactctgtattcaggctgaatatttctatt
tctgatcaaggggagccctctctgagttctacctgtgttctggaggtgatgctcacacac
accaatatgtccatgaatccattttctgacgacgacgccaacaacaaatacgtcgttatc
tgcgtcatcgttgtgatcatcaccatcttcttctctaccgtcctcatcactgtgatcatc
atcatccgaagaaatgacaggcgaaaccgggagaggaaagctgagcaagaaaagatgagg
aatcttcagcagttccagggcattgacaagcggtactaccagaatcaaaccccgaccttc
ccagaggacctcagcaagaaaaaaaagaaggaggtcagcttctccctggaagatgacctt
gacaagtccttggacatctccggccattccatcttagatgaccagcgttttaatttgtac
caccccggaccagagcaagacaagcttaaacactttgaccagttcctcatcaatccaaac
gcagacaatagaaagaataacctgctgaagggttcccacgatagcagtagtgacacgtcc
acagatttgacggccagtgacagtgggagaggggggagtgacgtcgagatgcaccactcc
tcaaacgctccagatgaggaaaaaacctacaatttatcaaatccctacacgcgggcttca
tcgtttccccctacagtgtacacaccccctgaccggggaggaactagagcctccaacaag
gccgacaatagtgctagcaataagaaagactatacagggctcacaccccgagagacattt
gagaagaaacatggaatcaacaggcattctcaagaatccacaaagtccgagagttgcctc
ccatcttatgtctga
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