Magallana gigas (Pacific oyster): 105339027
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Entry
105339027 CDS
T03920
Name
(RefSeq) cys-loop ligand-gated ion channel
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04080
Neuroactive ligand-receptor interaction
crg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
105339027
04082 Neuroactive ligand signaling
105339027
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
crg04040
]
105339027
Ion channels [BR:
crg04040
]
Ligand-gated channels
GABA-A
105339027
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF6773
Motif
Other DBs
NCBI-GeneID:
105339027
NCBI-ProteinID:
XP_034318412
UniProt:
A0A8W8MVB0
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Position
2:complement(29108917..29112793)
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AA seq
366 aa
AA seq
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MTDQDKKITPKHTVQTRVVFLKLSDIDTVKEQFAADVFIESRWREKSLDHGKENDNMDFS
KYWHPKLIVQNVISTSKDNVWKKLEFGKNGEAFIVEKRRIKGIFTENLELQDFPFDLQDL
SIVLTSEHPVEELEIIEDDEHLSSIIVSCFVDEQEWELREFVESEIRKVSKEFTGSKNVV
YPFLVFKTLAMRRAGFFVWNIILIMTIISSLSFATFAVNRNLPQNRLQLAFTLTLTGVTF
RFVTNQQLPKISYLTRLDKYILYCMVFNYLVTAWHAIVTLISDDDTQADYDLYFFIGFAV
FYALFHIFFYAISLKTRYFKVKEVHQKEKMYQEKAEKLFGESWKRRKNRVNRRERIAALP
STFSRF
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgacggaccaagacaaaaagattactcctaagcatacagtacagacacgagtcgtgttt
ctgaagttgagcgacattgacacggtgaaggaacagttcgcagcagacgtgttcatagag
agcagatggcgggaaaagtcgctggaccacggaaaggaaaacgacaatatggatttttcc
aaatactggcatcccaagctaattgtccaaaacgtgatctcaacatcgaaagacaatgtg
tggaaaaaactagaattcggtaagaatggggaggcatttattgtagagaagaggagaatt
aaaggaatattcacagaaaacttggagttacaagacttcccgtttgatcttcaggacctg
agtattgtgctgacgtcagaacatccggtcgaggaactggaaatcatcgaagacgacgaa
catttgagctccattatcgtttcttgttttgttgacgaacaggaatgggaactgcgagag
tttgtagaatcagaaataaggaaagtgtcaaaagagtttacagggtccaaaaacgtagtc
tatccatttcttgtcttcaaaactttggccatgagaagggctggtttctttgtttggaac
atcatcttgatcatgaccatcattagttcactgtctttcgccacatttgctgtcaataga
aatcttccacagaatcgacttcagttggccttcaccctgacccttacaggggtcacattt
agatttgtaaccaatcagcaacttccaaagatatcgtatttaacaagattggataagtac
atcctgtattgtatggtctttaactacctggttaccgcatggcacgccattgtgaccttg
atctctgatgatgatacccaggcggactatgacctctacttcttcatcggctttgccgtc
ttctacgccctgttccatatcttcttctacgccatttctttgaaaaccagatattttaaa
gtcaaagaagttcatcaaaaagaaaagatgtaccaggaaaaagcagaaaagttattcgga
gaaagttggaaacgaagaaagaacagagtcaatcgaagggagaggatagcggccctaccg
tccacgttttctagattttga
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