Magallana gigas (Pacific oyster): 105339144
Help
Entry
105339144 CDS
T03920
Name
(RefSeq) transcription factor HES-2
KO
K06054
hairy and enhancer of split 1
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03460
Fanconi anemia pathway
crg04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
105339144
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
105339144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crg03000
]
105339144
03400 DNA repair and recombination proteins [BR:
crg03400
]
105339144
Transcription factors [BR:
crg03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
105339144
DNA repair and recombination proteins [BR:
crg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
105339144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
Hairy_orange
GBP
Motif
Other DBs
NCBI-GeneID:
105339144
NCBI-ProteinID:
XP_011442866
LinkDB
All DBs
Position
3:complement(43692265..43694565)
Genome browser
AA seq
293 aa
AA seq
DB search
MTSRAMKKTGLSEKMKKASENPTPIKKINNKPQTERKRRERINKCLGQLKCLVFRATGKD
EKKYPRLEKADILEMAVNHLYTMNAKDSKQGTEEADDRYREGYSHCIGEVLQCLRFERGI
DVVTKTNLINHLTVSLSHLASTNQQTGYINQAFEVSVHDDSSSPSASGKPLHPNNVPSSE
GVQEVPVIVQPKCAEAPYQDHNIYMDFYTAPLDVRRAELNPVYTERMPCDYQPPCSPFHS
DFGVPLHTSTPMAKKRLRVIPDFPALEDINLSDCVATSSSSDSGSSAGPWRPW
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgacttcacgggcaatgaagaaaactggtttgagcgaaaaaatgaagaaagcgtctgaa
aatccaactccaattaaaaagataaacaacaaaccccagactgagaggaagagaagggag
agaatcaacaaatgtctaggacagctcaagtgtttggtgttcagagctacaggcaaagat
gagaaaaagtacccacggcttgagaaggcagacatactggagatggctgtcaatcatctg
tacaccatgaacgccaaagacagcaagcaaggtacggaggaagcagacgacaggtaccgc
gagggctacagtcactgtatcggcgaggttctacagtgtctccgattcgagcgaggaatt
gatgtcgtcaccaaaactaacctcatcaatcacctgacagtgtccctctctcatcttgcc
tccaccaatcaacagacgggttacatcaaccaggcgttcgaagttagtgtgcacgatgac
agttcctccccttccgcatcaggaaagcccctgcatcccaacaatgtcccaagcagcgaa
ggtgtccaggaagtgccagtaatcgtacagccgaagtgtgccgaggctccctaccaagac
cacaacatctacatggacttctacaccgcaccgcttgacgtccgccgtgctgaactcaac
cccgtctacaccgagcgcatgccgtgtgactaccagccgccatgttctccgttccactcc
gacttcggtgttcctctccacacatccactcccatggcgaagaagagactccgtgttatc
cccgacttccccgccttggaggacatcaaccttagtgactgtgtggcgacttcctcttcc
tccgacagcggaagttcagccggaccatggcgtccatggtaa
DBGET
integrated database retrieval system