Magallana gigas (Pacific oyster): 105339425
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Entry
105339425 CDS
T03920
Name
(RefSeq) iroquois-class homeodomain protein IRX-6
KO
K24889
iroquois-class homeodomain protein IRX
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crg03000
]
105339425
Transcription factors [BR:
crg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
105339425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Toxin_7
Motif
Other DBs
NCBI-GeneID:
105339425
NCBI-ProteinID:
XP_011443270
UniProt:
K1RA01
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Position
3:complement(22572492..22577729)
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AA seq
485 aa
AA seq
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MSISQVVPFPIPTGTSTQMTKTPSPTSSRSCCENGRPIMADPHTGQTICSCQYNPALLGY
SRLAGLPEGVYGSPAYTAQGLVPFASEGSAFYSPLTSGPYDIKEATEAWRSLAAAQPGAC
FPYDPTMSVYPYGPGYGGIDLNARRKNATRETTNTLKAWLYEHRKNPYPTKGEKIMLAII
TKMTLTQVSTWFANARRRLKKENKMTWSPRNRSEDDADDDLDNDEEDDLLRKNDCIVDKK
ESSNKIEESSKDCEDRELNEKIISVDEDEDSNLSFEERDTRQRVDSLSSESESLSNKILR
READAPSPNLSIGEDSRCSDLASPRCSSAVTCSPQPIKTDTNSTQNQDNRSKIWSVTQFL
NNSSSSDDEKDEEVKKPIVTSSMSSRGSLVPHSASDLYYLTSTASHMMRAGRYGGFGPYP
SALSLAHPPLSYPYILSSHAAAKSSLGGSHFPFSGPENLSKSAEKLVRSSSSLFSPARDI
DVVRP
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgtctatttcccaagttgttccttttccaattcctactggaacttcaacacagatgacc
aagacccctagtccaacttccagcaggagctgctgtgagaatggtcggcccatcatggct
gaccctcacactggacagacgatctgctcctgccagtacaacccagccctcctgggctac
tccaggctggctggacttcccgagggcgtctatggaagccctgcctacactgcccaagga
ttagtcccttttgcttcggaaggatctgctttttattctcctcttaccagtggtccctat
gatattaaggaagctacggaggcttggagaagcctcgctgcagctcaacctggggcttgt
ttcccgtacgaccctaccatgtcagtctacccttatggccctggatatggtggaattgac
ctaaacgcaagacgcaaaaatgccacacgtgaaaccacgaatacattaaaagcctggttg
tatgaacaccggaaaaatccctaccccacaaagggcgaaaaaatcatgctggctatcatc
accaaaatgactctgacacaggtctccacctggtttgctaacgccagaagaagactgaag
aaggaaaataaaatgacgtggtccccgcgaaatagatctgaggacgatgcagacgatgat
ctggacaatgatgaggaggacgatttgttgcggaaaaacgactgtatcgtcgataaaaaa
gaatccagcaacaaaattgaagagtcgtcaaaagactgtgaagatcgagaactaaatgag
aaaattatcagcgtggacgaagatgaagattctaatctgagttttgaagagagagacacg
cgacaaagagtggattccctgagctcagaaagcgaaagtttatcgaataaaattcttcga
agggaagcagatgcgccttctccaaatctcagcattggcgaagattcaagatgtagcgac
ttggcctctcctcggtgctccagcgctgtcacgtgttcaccccaacctattaaaactgac
acaaattctacccaaaatcaggacaatcgatccaaaatttggtctgtgacccagtttctg
aataattcgtcctcatccgatgacgaaaaggacgaagaagtgaaaaaacctattgtgacg
tcatcgatgtcaagtcgaggctcccttgtccctcatagtgcttcggacttgtattacctt
acctccacagctagtcacatgatgagggccggccggtacggcgggtttggcccttacccc
agtgctttgtcgttggcacatccgccattgtcgtacccttacatcctgtcctctcacgcc
gcggcaaaaagttctctgggcggatctcatttcccgttttctggaccggaaaacctgtcc
aaatctgcagaaaaactcgtaaggtcatctagttctctattttcccctgcaagagacatt
gatgttgttcgtccctag
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