Magallana gigas (Pacific oyster): 105339507
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Entry
105339507 CDS
T03920
Name
(RefSeq) gamma-aminobutyric acid receptor exp-1 isoform X1
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
105339507
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
crg04040
]
105339507
Ion channels [BR:
crg04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
105339507
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF5794
HisKA_7TM
Motif
Other DBs
NCBI-GeneID:
105339507
NCBI-ProteinID:
XP_011443382
UniProt:
K1QYI3
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Position
LG3:8441485..8445909
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AA seq
382 aa
AA seq
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MDTPKNQSLVRVMKKDNKVHVTDVVDAQRREVHLKVSIPNIMEVDTLKESFTADVFYQAR
WREPKLDGNKGSDNIDWTIYWNPKVFLSNAIAQKDHATWFVLQSDETGETYIVEKNRMVA
TFTESMELALFPFDIQDLNIFITTTLSEAEVGFHEDDREISSVHIETFAKKQEWKIYEFV
HFTPKVLTQEYANNKFRKPGMYVFCSAARKPGFFMWNVIVLMCIISSLALATFAVARSKI
ENRLQLSIMLVLVTVTFKFVTNQVIPKISYMTHLDRYIIGSTIFLYLIAMWHAGSETLVT
DDDLLSTLDQYAFYGFCGLFGLIQIIFTLIVVLSGSTRRYGVNKKLKNYHKKRQNIMRSV
EIVKTSKTNTLVKKQTLDYRVD
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggacacacccaaaaaccagagtttggttcgagtcatgaaaaaggacaacaaggtccat
gttacagatgtcgttgatgcccaaagaagggaagtgcaccttaaggtttctattcctaac
atcatggaagtcgacacattgaaggagagttttacggcggatgttttctatcaggcaaga
tggagggaaccaaaacttgacggtaacaaggggagtgataacatagattggacaatttac
tggaatccgaaggttttcctatcaaacgccattgctcagaaagaccatgccacgtggttt
gtgctccaaagtgatgagactggagagacctatatcgtggagaaaaaccgcatggtggcc
acttttaccgagagcatggaactagcactgtttccttttgacatccaggatttgaacatt
tttattacgacgacgctttctgaggcggaagttgggtttcatgaagatgatagagaaata
tcaagtgttcacatcgaaacatttgcaaagaaacaggaatggaaaatttacgaatttgtc
cactttacgccgaaagttttaactcaggaatatgccaacaataaattcagaaagcctggc
atgtacgtcttctgtagtgcggctaggaagccggggttctttatgtggaatgtcattgtt
ctaatgtgcattataagttccctggccctggcgacgtttgcggtggcccggagtaagata
gagaaccgcctacagctgtcaatcatgctggtactggtcacggtgaccttcaagtttgtc
accaatcaggtcatccctaagatatcttatatgacacacctggatcggtacattatcggg
agcaccatattcctgtacctgatagcgatgtggcacgctgggtcggagacactggtcact
gatgacgacttactgagtaccctggaccagtacgccttctatggcttctgtggactgttt
ggtctcatccaaatcatattcacactgatagtggtcttaagtggttctaccagacgatat
ggagtcaacaagaaactcaagaactatcataaaaaacgacagaacattatgagatcagta
gaaatcgtaaagacgtccaaaacaaatacattagtcaagaaacagaccctggattacaga
gtcgactga
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