Magallana gigas (Pacific oyster): 105339670
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Entry
105339670 CDS
T03920
Name
(RefSeq) laminin subunit alpha-2 isoform X1
KO
K05637
laminin, alpha 1/2
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04512
ECM-receptor interaction
crg04518
Integrin signaling
crg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105339670
04518 Integrin signaling
105339670
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105339670
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_G_2
Laminin_G_1
Laminin_N
Laminin_B
EGF_LMN_ATRN
ConA_2nd_BAM2
Laminin_G_3
Laminin_I
F5_F8_type_C
3keto-disac_hyd
Bap31_Bap29_C
TS_C
Motif
Other DBs
NCBI-GeneID:
105339670
NCBI-ProteinID:
XP_065923372
LinkDB
All DBs
Position
7:43950341..43994449
Genome browser
AA seq
3188 aa
AA seq
DB search
MVSNTWFVFVFWTLFLPAIECQDDIGLFPNILNLATRSTISVNATCGEEKSEVFCKLVDH
VKIFPYTNSHCDICDARSRDERQRHPITNAINGRNSWWQSPTLTNGAKFNYVTITLDLKQ
VYQVAYVIVKAANSPRPGNWILERSIDGVNFQPWQYFGLRNRDCKKLYGIKASRKIPTYL
RDDEVICTTKYSKIYPLENGEIFISLVNGRPGVKNPSPTLLEFTSARYVRLRLQKIRTLN
ADLMTFRSSSDLKFIDASVTRRYFYSIKDISIGGQCICYGHASVCLPRPNSDRLYCECKH
NTCGNNCEKCCEFYYQKPWRPGNNGLKCEKCNCHGHSTECVYNATVDAMRLSLNTAGEYD
GGGVCIDCKDYTTGINCERCLDGYYRPLGETPHSRYPCRPCRCEVTLGSTGKCVPDDSLM
SEGKRPGDCECKQGYGGPTCQECAFGYYGYPYCKPCPCNSAGTLSSQQCSGNCVCKESVE
GVKCDRCKRGFFNLHKDNPVGCMPCFCFGVSSVCQSSNLGLIKIPEGVVDMSDGMSGWAV
TSVNINGFTYFIQKNEEGWLVYRAYPANQNSLNPSEDTVVYYWQAPLKYLGNRLTSYGGS
LRYTVKYETDRTVPYQRHMYGVDVIIQSGNMTIVNGKSYLRENVQEERSVVLNESSWFQL
VKSDRYETLQPITKKELMIILFNIERLLIRATYHSAQNTVYLRDVTLDAVSALSNSSVTL
RAVEKCSCPRGYQGLSCEMCEPGFRRVGNKLYGGMCLPCNCNNHAERCDINTGRCINCQH
FTTGENCDTCLPGYYGDPRRGEEDDCKPCACPLLEPTNQFSASCQLIPQVGNYDNYKCDK
CAVGYIGNRCERCGPGYYGDPTKVGGSCRPCSCGGNIDGGDPGGCDRETGECLRCLNHTE
GPNCQRCQDGYYGRAVNGDCTACNCDMNGSVNGSCDQYSGRCICKDRFYGRRCDQCQPGY
GSVEEGCTPCDCDPVGSRGSLCDSYTGQCFCNIGVVGRKCDSCQPGFFGFSSRGCKDCGC
NTQGTNQTEPCDDITGICNCLPNVIGSRCNTCQENFWGLGTGNGCTPCECDRLGSVYSQC
DQRTGQCTCRPGVEGQQCDQCRPGYYGFSISGCKRCQPCDKLGHVCDPVTGRCVCPPLTT
GPQCGQCQPNTWGHDRVTGCKLCNCDPRTAESRQCDLITGQCTCKADYTGDKCDQCSPGF
YNHPNCQLCLCSADGTDPSSCNNSTGVCQCDNRGQCQCKNNVETRTCARCRPGSFSLDRT
NPYGCTECFCFERSNRCDQVPYVWRKVEIPGSSISFDPRVTDKVTLQYKSYAVIPRNSTW
TAVPQSLASKPIYWSLPDSYLGDWTLSYNGKMRFEVEYRSDKGPPSRADDSPDVVVIGNS
FQMVHKTSTPWSQRGEKSISVKFHPTEWMIVGYGNATRSLMMIVLQNVTEVYIIATPDDQ
ARAATLRFLSVDSAQPGNGSTDNPALGVEICQCPQQYSGLSCQDPADGYYRLKHNVTTDI
SHPIVVIGEVVRCNCHRHSDTCDRETGVCQNCQHNTTGGQCQRCLPGFYGDATRGSSVDC
QPCICPTIENNFSSTCEIRRGQLICTNCTEGYTGTRCESCADGYYGNPRQAGGHCLPCDC
NPEGSVSSSCNLQGQCRCLPGITGDKCDGCQPRHAVEDGRCVSCDEGCTADLMKELDDLS
NMTRQVNLTGKLPVPWNQLWRIQNETILLKEELETIRTAELSHLKSQANDLEREADSLLT
ESRRAKLQATPLEEKAVSLRNNATNLEADLNETIRDMKDFVEKLVDTVQSLFHNKSGINV
TDALEKVKVILKEIKDRNFTTTLDRAIKENKLAEELSEKLLNMTNKLVNTSGIMDDIQAL
LDKLLDLQRHSNESKKQSDEVFTLISGISRMQNSTMDTVLEIDQNYDNLIDVLGEGHTLN
LEAADQLRQVKENIEDIEKKASIFDQILPELRKKVNGTKSQIPAVESKVREAESHARNLS
NYAEQLEREFEKTKADAADPLKAAQVYSNIVKAVNEAEEAAKRAIQAAEESIKIAGVKNI
TDEVSRSLNKSRELLRQAKQTLRKVPELDRHLDVLNKDLLRLEEEQSQIRQGQSDIRDIL
NLLPDDLSDRASKVSKDTDKTSNDVKALDRKVDDIENNIQNSLIPRFNQIKNVRLDEVFE
NIENSIDTAKENVKQIGAIVEGVEAAANRTITAESRLNDKLKMLRDNIKQARAQAEKVKV
SLSASGQCVRSYHSKSVPGVTNKISFSFKTNNTTNNQIFLLLQKSPTEFLAVEMINAKIQ
FSWNVGAGVGSVTSDLPIQSEANFINTIDKWYHVKADRLGRIGTLEVSKLSNVNAAKKVT
GVSPVGRSFLRLDENSDLYVAGVPYGIEKSSELRSTSNFSGCMNEMYIDDQKIGLHNFKT
TSKQGCWGCRNVPAANVEQTGTFHFDGLGYSAKPQVRSYRSTTFYVKMEFKTFWRDAILL
FTGNNKTGDFLYIGIQDQKLVLQIYTGGDSYLSISSALTYNDNKWHTIVTERANLDAYLQ
VDGTDMKFLTANGSNTGLELKGRPLYFGGIPESYDLEPFLKWGAINRTGFLGCLRQVQIQ
TFSQDLLTGETVGVTNGCPAEGYRTIGFYGNGFAKYKAATLPGEKGDISLSFRTTQRDAL
LLLAYDNDQRNFYSFVLVDGKVEGRFSTNSLPQKITTSKTFNDGHLHNVAIQKVGNRITV
YVDDEAQLEEVILRREEVNVDHLYIGGVIDYNFPQGQAMAATTQGLEGCISDIIINQKIL
NLNAPLQFERADIGRCRLPTNGHSHNLQDAQTTKPPATTPKASTSRPRDVNPVTTTGGPP
VSCALTPNLPQNIRSLIFGNSPKSHGKIVIDPEEVQESFQISFDFRTFYENGSIFLLSNA
NYSEYIAAQILKGSVVVYWTNNGGKIKKYVSSKVVNSGQWHTAIVSKDRRRISLEVDGKT
EMDKQRIPKKLSITSPMIVGSLVDDININNDDLIRHSLRGCMKNFIVNTKSIMIADATQV
QGVTTCYINMEPGVFMNKNSYGVIANRYSVGREMKIALEFRTHKPNGILLSITDNQAVTL
ELHQGKVKFSVFNVALFTATSKETNLCDDRWHSVEAKLIGNVVELVVDGGDSQYGSSQNT
ARNVTTSSALYVGGVPDYAVKQIASFNQMEGTAEGFEGCLRNFKIDSTPVDWFSLLEQEN
IQRTGCPY
NT seq
9567 nt
NT seq
+upstream
nt +downstream
nt
atggtttccaacacctggtttgtctttgttttttggactctatttttacctgcaatcgaa
tgccaagatgatattggattattcccaaacattctgaatttggcaacaaggtcaaccata
agtgttaatgcaacctgtggagaagaaaagagtgaagtgttctgtaagcttgtagaccat
gtcaagattttcccgtacacgaactcgcattgtgacatctgcgacgctagaagccgagat
gaaagacagcgacatccaataactaatgctataaatgggaggaattcctggtggcaaagt
cccaccctcaccaacggagcaaagtttaactatgtcacaattacccttgacctcaagcag
gtttaccaggtagcttacgtcatagtaaaggcagccaactccccacggccggggaactgg
attctggaaagatccattgatggcgtgaattttcagccctggcagtactttggacttcga
aatcgagactgcaaaaaattgtacggcataaaggccagtcgtaaaattcccacctacctc
agagatgacgaggttatctgtacaacaaaatactcaaaaatctacccactggaaaatgga
gaaattttcatatcgcttgtcaatgggagaccgggagtaaagaatccgagcccaactctg
ctggagtttacctcagctcgctatgtcagactgagattacagaagataaggacactcaat
gctgacctcatgaccttcaggtcatccagtgacctcaagttcatcgatgcatctgttacc
aggaggtacttttattccatcaaagatatttccattggagggcagtgtatctgctatggt
catgcttccgtttgtttacctcgacccaactcagataggctttattgtgagtgcaagcac
aacacttgtggcaataattgtgaaaaatgttgtgaattctactaccaaaaaccatggcga
ccagggaacaatggcctcaaatgtgaaaaatgcaactgtcatggccattccacagagtgt
gtatataatgccacagtggatgcaatgaggctcagtcttaacacagcgggggagtatgat
gggggaggagtctgtatagactgtaaggactataccactggaataaactgtgagagatgt
ctggatggatattaccgcccactcggggaaacccctcactctcggtatccttgtagacca
tgtagatgtgaagtcactctggggtctacaggaaaatgtgttccagatgacagcttgatg
agtgaaggaaagagacctggagactgtgagtgtaagcagggctatgggggacccacctgt
caggagtgtgcctttggttactatggatacccgtactgtaagccctgtccctgtaacagt
gcaggaacattgagctcacaacaatgcagtggcaactgtgtttgtaaggagagtgttgag
ggcgtcaaatgtgaccggtgtaagcggggcttctttaaccttcacaaggacaatcctgtg
ggctgcatgccgtgtttctgtttcggagtgtcctctgtctgtcagtcctctaatcttggt
ctcatcaagattccagaaggggttgtggacatgtcggatggtatgagtggctgggctgta
acctcggtcaacatcaatggcttcacctatttcatacagaagaatgaggaaggatggctt
gtgtacagagcctacccagccaatcagaactctctaaacccctctgaggatacggtggtg
tattactggcaggcaccactcaaataccttggaaatcggttgacgtcatacggaggaagt
ctgagatacacagtgaagtatgagactgatcgtactgtaccgtaccagcgacacatgtat
ggagtagatgtcatcatccagagtggtaatatgaccattgtgaatgggaagagctatctg
agggagaatgttcaagaggagagatcagtggtgctgaatgaatccagttggttccagtta
gtgaagagtgaccgctatgagaccctgcagcccatcaccaaaaaggaattaatgataatc
ctgttcaacattgagagacttctgatacgggcgacatatcactctgctcaaaacactgtg
tatttacgtgatgtcacactggatgctgtgagtgctctgtctaacagctcagtcacactc
agggcggtagagaaatgttcctgtccccggggctaccagggtctctcctgtgaaatgtgt
gagcctgggtttcgtagagtgggaaacaagctgtacggaggaatgtgcttaccttgtaac
tgcaacaaccatgctgagcgctgtgatatcaacactggaaggtgtattaattgtcagcat
ttcacaacgggagaaaactgtgacacatgtctgcctggttactatggtgaccctcgccgt
ggagaggaagatgactgcaaaccatgtgcatgtcctctgctggaaccaaccaatcagttc
tctgcttcatgtcagctgataccgcaagttggaaactatgacaactacaagtgtgataag
tgtgctgttggctacattggaaacagatgtgaaagatgtggccctggttactacggggat
ccaacaaaagttggtggatcctgtcggccatgttcctgtgggggtaatattgacggggga
gaccctgggggctgtgacagggagacaggagagtgcctgaggtgtctgaaccacactgag
gggcccaactgtcagcggtgtcaggatgggtactacggaagagcggtcaatggcgactgt
acagcatgtaattgtgatatgaatggctcagtgaatgggtcatgtgaccagtattccggg
cgatgtatttgcaaggacaggttttatggaagacgttgtgatcaatgccagcctgggtat
gggagtgtagaggaggggtgtaccccctgtgactgtgacccggtcggatcacgggggtcg
ttgtgtgacagttataccggccagtgcttctgtaatataggtgttgttggtaggaagtgt
gacagttgtcagccgggatttttcggattctcatctcgtggttgcaaggactgtggatgt
aacacacaaggaaccaatcaaacggagccctgtgatgacatcacagggatctgtaactgt
ctgcccaatgtcattggatcccgctgcaatacctgtcaggaaaatttctggggtctgggt
actgggaacggctgcaccccctgtgagtgtgacagactggggtcagtctattcccagtgt
gaccagaggactggacagtgtacttgtagacctggggtggagggtcaacagtgtgaccaa
tgccgaccgggctattatggattctccatcagtggctgtaaacgatgtcagccttgtgat
aagcttggccatgtgtgtgatccagtcactggtcggtgtgtctgtcccccccttaccacc
ggaccacagtgtggtcagtgccagcccaacacctggggtcatgatagagtaacaggttgc
aaactttgcaactgtgatccacggacagcagagtccagacagtgtgacctgattactgga
cagtgcacctgtaaggcggactacacaggtgataagtgtgaccagtgctcacctggcttc
tacaatcacccgaactgtcagctctgtctgtgtagtgctgatggtaccgaccctagcagc
tgcaacaattccacgggggtctgtcagtgtgataatagggggcagtgtcaatgcaagaac
aatgttgagactcgtacctgtgctcgttgtcgcccaggatccttcagtctggaccgaacc
aacccctatggctgcacagagtgtttctgtttcgagcgatccaacagatgtgaccaggtt
ccatatgtctggagaaaggtagagattcctgggagcagtatttcctttgacccccgtgtt
acagacaaggtgactctacagtataaatcttacgctgtcattcctcgcaattctacatgg
acagctgtaccacagtccttagcatctaaaccgatctactggagtctccctgatagctat
cttggagattggaccttatcgtacaatggaaagatgagatttgaggttgaatacagatct
gataaaggacctccatcccgagccgatgacagtccggatgttgtggtcatcgggaacagc
ttccagatggttcacaaaacatcaacaccctggtctcaaagaggagagaaatcaatttct
gtcaagtttcatccaacagagtggatgattgttggatatggaaatgctaccaggagtttg
atgatgattgttctacaaaatgtcacagaggtttacataatagccacaccagatgaccaa
gccagagctgccacgttgaggtttttgtctgtggacagtgcccagccaggaaatggtagc
acagataacccagccctgggtgtggagatttgtcagtgtccccagcagtactccggtctc
tcttgtcaggacccagcagatggttactaccgactgaagcacaatgtaaccacagatata
tctcatccaattgtggtgatcggggaggtggttcgctgtaactgtcaccgacactcggac
acctgtgatcgggagactggagtgtgtcagaactgtcagcacaacactacaggaggtcag
tgtcaaagatgtctgcctggtttctatggagatgctaccagaggttcatcggtggactgt
caaccctgtatctgccctaccatagaaaataattttagcagtacatgtgaaataaggcgt
ggtcagctgatatgcactaactgcacagagggttacacagggacaagatgtgaatcatgt
gctgatggttactatgggaacccaagacaagctggtggtcattgtttgccgtgtgattgt
aatcctgagggctcggtatcatcttcctgtaacctccagggccagtgtcggtgtcttcca
ggaattactggagacaaatgtgatggatgtcagccgcgacatgccgtggaggatggaaga
tgtgtctcatgtgatgagggttgtactgctgacctaatgaaagagcttgatgacctgagt
aacatgactcgtcaggtcaacctcacaggcaaacttcctgttccttggaaccaactgtgg
agaattcaaaatgaaacaattttactcaaggaagagttggagactatcaggacagccgaa
ctgagtcatttgaaatcacaggcaaatgaccttgagcgagaggccgactctcttctcact
gaatctaggagagccaaacttcaggcgactcctctggaggagaaagctgtatctctgagg
aacaatgccacaaacctggaggccgacctcaatgaaacaatcagagacatgaaagacttt
gtggagaagctggtggatacggtgcaaagtctgttccacaataaaagtggaatcaatgtg
actgatgctctagaaaaggtcaaggtcatcctgaaggagatcaaggacaggaatttcaca
acaacattagatagagccatcaaggagaacaaattagcagaagaattgtcagagaaattg
ttaaatatgacgaacaagcttgtgaatacctctggaataatggatgacattcaggctcta
ttggataagctgctggacctccagaggcattccaacgagtccaagaaacagtctgacgaa
gtgttcaccctgattagtggcatatccagaatgcagaattcaacaatggacacggtgctg
gaaatagaccagaactatgataacttgattgacgttctaggggagggacacacactcaac
ctagaggcagcagatcaactcagacaggtcaaggaaaacattgaggatatagaaaagaaa
gcaagtatttttgaccagattttgcctgaacttagaaagaaagtcaatggcacaaaatcc
cagataccagccgtagaaagtaaagtcagagaggctgaaagtcacgccaggaatctgtca
aactatgccgaacagttagagagggaatttgaaaaaaccaaagcagatgcggctgatccc
ctgaaggcggcccaggtgtatagtaatatcgtgaaggctgtcaatgaggcggaggaagct
gccaaacgagcaatccaggcagctgaggagtccatcaaaattgctggagtgaaaaacatc
actgatgaagtgtcgcgctccctgaacaagagcagagaactcctgagacaagccaagcaa
actctgaggaaagtccctgagttagataggcatctagatgttttaaacaaagatttgctt
cgactggaagaagaacagagccagatcagacagggacagtcagatatcagggacattctc
aacctcctgcctgatgatctgagtgacagagcttcaaaggtttccaaggatacggacaag
acctccaatgatgtaaaagcattggacagaaaagtagatgatattgaaaacaacattcag
aactctctcatccccaggttcaaccagatcaagaatgttagattggatgaggtctttgaa
aacattgaaaattcaattgacacggctaaggagaatgtgaagcagattggcgccattgtg
gagggagtggaagctgccgctaacagaactataactgctgagtcaagactcaacgacaaa
ctcaagatgctcagggacaacatcaaacaggctcgtgctcaggcagaaaaggtgaaggtg
tccctgtcagccagcggtcagtgtgtgaggtcctaccactccaagtctgtccccggggtc
accaacaaaatcagcttctccttcaagacaaacaacactaccaacaaccagatcttcctg
ctgctgcagaaatctcccacagaatttctagcagtggagatgataaatgcgaagattcag
ttttcctggaatgttggtgctggcgtggggagcgttaccagtgaccttcccattcagagt
gaggctaacttcatcaataccattgacaaatggtaccatgtcaaagccgacaggcttgga
agaattggaacattggaagtcagtaagctctctaatgtaaatgctgctaagaaagtgact
ggggtctctcccgtgggccgatctttcctgaggcttgatgagaactctgatctgtatgtg
gccggtgtgccttatggaatagagaaatcatcagaattgagaagcacatccaatttctct
ggatgtatgaatgaaatgtacattgatgatcagaaaattggacttcacaactttaagacc
acctccaaacaaggctgttgggggtgcagaaatgtgcctgcagccaacgtggaacagact
ggcaccttccacttcgatgggttggggtattcagccaaacctcaggtcagatcttacaga
agcacaacattttacgtcaagatggagttcaagactttctggagagacgccatcttgctg
ttcactggaaacaataaaactggagattttctatatatcggtatacaagatcagaaactg
gtcctgcagatctatactggtggcgacagttatctttcaatttccagcgcattaacgtat
aacgataacaagtggcataccatagttacagagcgagccaatctggatgcataccttcaa
gtagacggcacagacatgaaattcctcactgccaatggcagtaatactggtctagaattg
aaagggagaccactctattttggaggaattccagaaagctacgatttggaaccatttttg
aagtggggagctataaatagaactggattcttgggctgtctccgtcaggtccagatccag
accttctcccaggatctactgaccggtgagaccgtcggtgtcaccaatggttgtccagca
gagggatacagaactataggtttctatgggaatggatttgcaaaatacaaggctgctacc
cttcctggggagaaaggtgacatttccctgtcatttagaaccacccagagggatgcacta
ttactgcttgcctacgataatgatcaaaggaatttttactcctttgttcttgttgatggg
aaagttgaaggaaggtttagtacaaacagtcttccacagaaaataaccacatcgaagact
tttaatgatgggcatttgcacaatgtagctattcaaaaagtcggaaacaggattacagtt
tatgttgatgacgaggcacagctagaagaagtgattcttcgtagagaggaggtcaatgta
gatcacctatatattggaggtgtcatcgactacaacttccctcagggtcaagctatggca
gccacaacccaggggctagaggggtgtatcagtgacatcatcatcaatcaaaagattctc
aacctaaatgctcctctccagtttgagagagctgacattggaagatgtcgattgccgacc
aatggacattcccacaaccttcaggatgctcaaaccacaaaaccacctgccaccacccct
aaggcatccacctcaagacccagagatgtaaacccagtaaccaccactggtggtcctcca
gttagctgtgcactaactcctaatctaccgcaaaacattcgatcacttatatttggaaat
tcacctaagagccatgggaaaattgtgattgatccagaggaagttcaagagtcattccag
atatcctttgacttccgtacattctatgagaatggatccatctttttactgagcaatgcc
aactactcggagtatatagctgctcagattttgaaaggctctgtggtagtgtattggaca
aataatggtggaaagataaagaaatatgtctcctccaaagttgtcaatagtggtcaatgg
cacactgctatcgtctccaaagaccggcggagaatcagcctggaggtggatgggaagacg
gagatggacaaacagaggattcccaagaagttgtctataacctcccccatgattgtcgga
agccttgtagatgatatcaacattaataatgatgacttgattaggcacagcttgcgtgga
tgtatgaagaacttcattgttaacactaagagtataatgatagctgacgctacacaagta
cagggagtcaccacatgttatataaatatggagcctggggttttcatgaacaaaaactcc
tatggagttatagccaacaggtattcagttggtcgagaaatgaagatagcgttagaattc
cgcacccacaagcccaacggtatcctcctatctattaccgacaaccaggctgtcacactg
gagctacaccagggcaaggtgaagttctcggtgttcaatgtagcccttttcactgcaacg
tctaaggagacgaacctctgtgacgaccggtggcactctgtggaagccaagctgatcggg
aatgttgtggagctggtggttgacggcggtgattcccagtacggcagcagtcagaatacc
gccaggaatgtcaccacctcctccgccctctatgtgggaggagtgccagactatgcagtg
aagcagatagcttcatttaatcagatggaaggaacagcagagggatttgagggctgtcta
agaaacttcaagatagactccaccccggtagactggttctctctattagaacaggagaac
attcagcgaacaggatgtccttattaa
DBGET
integrated database retrieval system
