Magallana gigas (Pacific oyster): 105339670
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Entry
105339670 CDS
T03920
Name
(RefSeq) laminin subunit alpha-2-like isoform X1
KO
K05637
laminin, alpha 1/2
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04512
ECM-receptor interaction
crg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105339670
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105339670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_G_2
Laminin_G_1
Laminin_N
Laminin_B
Laminin_G_3
Laminin_I
Laminin_II
F5_F8_type_C
3keto-disac_hyd
Bap31_Bap29_C
TS_C
Motif
Other DBs
NCBI-GeneID:
105339670
NCBI-ProteinID:
XP_034314664
LinkDB
All DBs
Position
LG10:47218765..47278318
Genome browser
AA seq
3188 aa
AA seq
DB search
MVSNTRFVFVFWTLFLPAIECQDDIGLFPNILNLATRSTISVNATCGEEKSEVFCKLVDH
VKIFPYKNSHCDICDARSRDERQRHPITNAINGRNSWWQSPTLTNGAKFNYVTITLDLKQ
VYQVAYVIVKAANSPRPGNWILERSIDGVNFQPWQYFGLRNRDCKKLYGIKASRKIPTYL
RDDEVICTTKYSKIYPLENGEIFISLVNGRPGVKNPSPTLLEFTSARYVRLRLQKIRTLN
ADLMTFRSSSDLKFIDPSVTRRYFYSIKDISIGGQCICYGHASVCLPRPNSDRLYCECKH
NTCGNNCEKCCEFYYQKPWRPGNNGLKCEKCNCHGHSTECVYNATVDAMRLSLNTAGEYD
GGGVCIDCKDYTTGINCERCLDGYYRPLGETPHSRYPCRPCRCEVTLGSTGKCVPDDSLM
SEGKRPGDCECKEGYGGPTCQECAFGYYGYPYCKPCPCNSAGTLSSQQCSGNCVCKENVE
GVKCDRCKRGFFNLHKDNPVGCMPCFCFGVSSVCQSSNLGLIKIPEGVVDMSDGMSGWAV
TSVNINGFTYFIQKNEEGWLVYRAYPANQNSLNPSEDTVVYYWQAPLKYLGNRLTSYGGS
LRYTVKYETDRTVPYQRHMYGVDVIIQSGNTTIVNGKSYLRENVQEERSVVLNESSWFQL
VKSDRYETLQPITKKEFMIILFNIERLLIRATYHSAQNTVYLRDVTLDAVSALSNSSVTL
RAVEKCSCPRGYQGLSCEMCEPGFRRVGNKLYGGMCLPCNCNNHAERCDINTGRCINCQH
FTTGENCDTCLPGYYGDPRRGEEDDCKPCACPLLEPTNQFSASCQLIPQVGNYDNYKCDK
CAVGYTGNRCERCAPGYYGDPTKVGGSCRPCSCGGNIDGGDPGGCDRETGECLKCLNHTE
GPNCQRCQDGYYGRAVNGDCTACNCDMNGSVNGSCDQYSGRCICKDRFYGRRCDQCQPGY
GSVEEGCIPCDCDPVGSRGSLCDSYSGQCFCNIGVVGRKCDSCQPGFFGFSSRGCKDCGC
NTQGTNQTEPCDDITGICNCLPNVIGSRCNTCQENFWGQGTGNGCTPCECDRLGSVYSQC
DQRTGQCTCRPGVEGQQCDQCRPGYYGFSISGCKRCQPCDKPGHVCDPVTGRCVCPPLTT
GPQCGQCQPNTWGHDRVTGCKLCNCDPRTAESRQCDLITGQCTCKADYTGDKCDQCSPGF
YNHPNCQLCLCSADGTDPSSCNNSTGVCQCDNRGQCQCKNNVETRTCARCRPGSFSLDRT
NPYGCTECFCFERSNRCDQVPYVWRKVEIPGSSISFDPRVTDKVTLHYKSYAVIPRNSTW
TAVPQSLASKPIYWSLPDSYLGDWTLSYNGKMRFEVEYRSDKGPPSRADDSPDVVVIGNS
FQMVHKTSTPWSQRGEKSISVKFHPTEWMIVGYGNATRSLMMIVLQNVTEVYIKATPVDQ
ARAATLRSLSVDSAQPGNGSTDNPALGMEICQCPQQYSGLSCQDPADGYYRLKHNITTDI
SHPIVVIGEVVRCNCHRHSDTCDRETGVCQNCQHNTTGSQCQRCLPGFYGDATRGSSVDC
QPCICPTIENNFSSTCEIRRGQLICTNCTEGYTGTRCESCADGYYGNPRQAGGHCLPCDC
NPEGSVSSSCNLQGQCRCLPGITGDKCDGCQPRHAVEDGRCVSCDEGCTADLMKELDDLS
NMTHQVNLTGKLPVPWNQLWRIQNETILLKEELETIRTAELSHLKSQANDLEREADSLLT
ESRRAKLQATPLEEKAVSLRNNATNLEAGLNETIRDMKDFVEKLVDTVQSLFHNKSGINV
TDALEKVKVILKEIKDRNFTTTLDRAIKENKLAEELSEKLLNMTNKLVNTSGIMDDIQAL
LDKLLDLQRHSNESKKQSDEVFTLISGISRMQNSTMDTVLEIDQNYDNLIDVLGEGHTLN
LEAADQLRQVKENIEDIEKKASIFDQILPELRKKVNGTKSQIPAVESKVREAESHARNLS
NYAEQLEREFEKTKADAADPLKAAQVYSNIVKAVNEAEEAAKRAIQAAEESIKIAGVKNI
TDEVSRSLNKSRELLRQAKQTLRKVPELDRHLDVLNKDLLRLEEEQSQIRQGQSDVKDIL
NLLPDDLSDRASKVSKDMDKTSNDVKALDRKVDDIENNIQNSLIPKFNQIKNVRLDEVFE
NIENSIDTAKENVKQIGAIVEGVEAAANRTITAESRLNDKLKMLRDNIKQARAQAEKVKV
SLSASGQCVRSYHSKSVPGVTNKISFSFKTNNTTNNQIFLLLQKSPTEFLAVEMINAKIQ
FSWNVGAGVGSVTSDLPIQSEANFINTIDKWYHVKADRLGRIGTLEVSKLSNVNAAKKVT
GVSPVGRSFLRLDENSDLYVAGVPYGIEKSSELRSTSNFSGCMNEMYIDDQKIGLHNFKT
TSKQGCWGCRNVPAANVEQTGTFHFDGLGYSAKPQVRSYRSTTFYVKMEFKTFWRDAILL
FTGNNKTGDFLYIGIQDQKLVLQIYTGGDSYLSISSALTYNDNKWHTIVTERANLDAYLQ
VDGTDMKFLTANGSNTGLELKGRPLYFGGIPESYDLEPFLKWGAINRTGFLGCLRQVQIQ
TFSQDLLTGETVGVTNGCPAEGYRTIGFYGNGFAKYKAATLPGEKGDISLSFRTTQRDAL
LLLAYDNDQRNFYSFVLVDGKVEGRFSTNSLPQKITTSKTFNDGHLHNVAIQKVGNRITV
YVDDEAQLEEVILGREEVNVDHLYIGGVIDYNFPQGQAMAATTQGLEGCISDIIINQKIL
NLNAPLQFERADIGRCRLPTNGHSHNLQDAQTTKPPATTPKASTSRPRDVNPVTTTGGPP
VSCAQTPNLPQNIRSLIFGNSPKSHGKIVIDPEEVQESFQISFDFRTFYENGSIFLLSNA
NYSEYIAAQILKGSVVVYWTNNGGKIKKYVSSKVVNSGQWHTAIVSKDRRRISLEVDGKT
EMDKQRIPKKLSITSPMIVGSLVDDININNDDLIRHSLRGCMKNFIVNTKSIMIADATQV
QGVTTCYINMEPGVFMNKNSYGVIANRYSVGREMKIALEFRTHKPNGILLSITDNQAVTL
ELHQGKVKFSVFNVALFTATSKETNLCDDRWHSVEAKLIGNVVELVVDGGDSQYGSSQNT
ARNVTTSSALYVGGVPDYAVKQIASFNQMEGTAEGFEGCLRNFKIDSTPVDWFSLLEQEN
IQRTGCPY
NT seq
9567 nt
NT seq
+upstream
nt +downstream
nt
atggtttccaacacccggtttgtctttgttttttggactctatttttacctgcaatcgaa
tgccaagatgatattggattattcccaaacattctgaatttggcaacaaggtcaaccata
agtgttaatgcaacctgtggagaagaaaagagtgaagtattctgtaagcttgtagaccat
gtcaagattttcccgtacaagaactcgcattgtgacatctgcgacgctagaagccgagat
gaaagacagcgacatccaataactaatgctataaatgggaggaattcctggtggcaaagt
cccaccctcaccaacggagcaaagtttaactatgtcaccattacccttgacctcaagcag
gtttaccaggtagcttacgtcatagtaaaggcagccaactccccacggccggggaactgg
attctggaaagatccattgatggcgtgaattttcagccctggcagtactttggacttcga
aatcgagactgcaaaaaattgtacggcataaaggccagtcgtaaaattcccacctacctc
agagatgacgaggttatctgtacaacaaaatactcaaaaatctacccactggaaaatgga
gaaattttcatatcgcttgtcaatgggagaccgggagtaaagaatccgagcccaactctg
ctggagtttacctcagctcgctatgtcagactgagattacagaagataaggacactcaat
gctgacctcatgaccttcaggtcatccagtgacctcaagttcatcgatccatctgttacc
aggaggtacttttattccatcaaagatatttccattggagggcagtgtatctgctatggt
catgcttccgtttgtttacctcgacccaactcagataggctttattgtgagtgcaagcac
aacacttgtggcaataattgtgaaaaatgttgtgaattctactaccaaaaaccatggcga
ccagggaacaatggcctcaaatgtgaaaaatgcaactgtcatggccattccacagagtgt
gtgtataatgccacagtggatgcaatgaggctcagtcttaacacagcgggggagtatgat
gggggaggagtctgtatagactgtaaggactacaccactggaataaactgtgagagatgt
ctggatggatattaccgcccactcggggaaaccccccactctcggtatccttgtagacca
tgtcgatgtgaagtcactctggggtctacaggaaaatgtgttccagatgacagcttgatg
agtgaaggaaaaagacccggagactgtgagtgtaaagagggctatgggggacccacctgt
caggagtgtgcctttggttactatggatacccgtactgtaagccctgtccctgtaacagt
gcaggaacattgagctcacaacaatgcagtggcaactgtgtttgtaaggagaatgttgag
ggcgtcaaatgtgaccggtgtaagcggggcttttttaaccttcacaaggacaatcctgtg
ggctgcatgccgtgtttctgtttcggagtgtcctctgtctgtcagtcctctaatcttggt
ctcatcaagattccagaaggggttgtggacatgtcggatggtatgagtggctgggctgta
acctcggtcaacatcaatggcttcacctatttcatacagaagaatgaggaaggatggctt
gtgtacagagcctacccagccaatcagaactctctaaacccctccgaggatacggtggtg
tattactggcaggcaccactcaaataccttggaaatcggttgacgtcatacggaggaagt
ctgagatacacagtgaagtatgagactgatcgtactgtaccgtaccagcgacacatgtat
ggagtagatgtcatcatccagagtggtaatacgaccattgtgaatgggaagagctatctg
agggagaatgttcaagaggagagatcagtggtgctgaatgaatccagttggttccagtta
gtgaagagtgaccgctatgagaccctgcagcccatcaccaaaaaggaattcatgataatc
ctgttcaacattgagagacttctgatacgggcgacatatcactctgctcaaaacactgtg
tatttacgtgatgtcacactggatgctgtgagtgctctgtctaacagctcagtcacactc
agggcggtagagaaatgttcctgtccccggggctaccagggtctctcctgtgaaatgtgt
gagcctgggtttcgtagagtgggaaacaagctgtacggaggaatgtgcttaccttgtaac
tgcaacaaccatgctgagcgctgtgatatcaacactggaaggtgtattaattgtcagcat
ttcacaacgggagaaaactgtgacacatgtctgcctggttactatggtgaccctcgccgt
ggagaggaagatgactgcaaaccatgtgcatgtcctctgctggaaccaaccaatcagttc
tctgcttcatgtcagctgataccgcaagttggaaactatgacaactacaagtgtgataag
tgtgctgttggctacacaggaaacagatgtgaaagatgtgcccctggttactacggggat
ccaacaaaagttggtggatcctgtcggccatgttcttgtgggggtaatattgacggggga
gaccctgggggctgtgacagggagacaggggagtgcctgaagtgtctgaaccacactgag
gggcccaactgtcagcggtgtcaggatgggtactacggaagagcggtcaacggcgactgt
acagcatgtaattgtgatatgaatggctcggtgaatgggtcatgtgaccagtattccggg
cgatgtatttgcaaggacaggttttatggaagacgttgtgatcaatgccagcctgggtat
gggagtgtagaggaggggtgtatcccctgtgactgtgacccggtcggatcgcgggggtcg
ttgtgtgacagttatagcggccagtgcttctgtaatataggtgttgttggtaggaagtgt
gacagttgtcagccgggatttttcggattctcatcacgtggttgcaaggactgtggatgt
aacacacaaggaaccaatcaaacggagccctgtgatgacatcacagggatctgtaactgt
ctgcccaatgtcattggatcccgctgcaatacctgtcaggaaaatttctggggtcagggt
actgggaacggctgcactccctgtgagtgtgacagactggggtcagtctattcccagtgt
gaccagaggactggacaatgtacttgtagacctggggtggagggtcaacagtgtgaccaa
tgccgaccgggctattatggattctccatcagtggctgtaaacgatgtcagccttgtgat
aagcctggccatgtgtgtgatccagtcacgggtcggtgtgtctgtcccccccttaccacc
ggaccacagtgtggtcagtgccagcccaacacctggggtcatgatagagtaacaggttgc
aaactttgcaactgtgatccacggacagcagagtccagacagtgtgacctgattactgga
cagtgcacctgtaaggcggactacacaggtgataagtgtgaccagtgctcacctggcttc
tacaatcacccgaactgtcagctctgtctgtgtagtgctgatggtaccgaccctagcagc
tgtaacaattccacgggggtctgtcagtgtgataacagggggcagtgtcaatgcaagaac
aatgttgagactcgtacctgtgctcgttgtcgcccaggatccttcagtctggaccgaacc
aacccctatggctgcacagagtgtttctgtttcgagcgatccaacagatgtgaccaggtt
ccatatgtctggagaaaggtagagattcctgggagcagtatttcctttgacccccgtgtt
acagacaaggtgaccttacattataaatcttacgctgtcattcctcgcaattctacatgg
acagctgtaccacagtccttagcatctaaaccgatctactggagtctccctgatagctat
cttggagattggaccttatcgtacaatggaaagatgagatttgaggttgaatacagatca
gataaaggacctccatcccgagccgatgacagtccggatgttgtggtcattgggaacagc
ttccagatggttcacaaaacatcaacaccctggtctcaaagaggagagaaatcaatttct
gtgaagtttcatccgacagagtggatgatagttggatatggaaatgctaccaggagtttg
atgatgattgttctacaaaatgtcacagaggtttacataaaagccacaccagttgaccaa
gccagagctgccacgttgaggtctttgtctgtggacagtgcccagccaggaaatggtagc
acagataacccagccctggggatggagatttgtcagtgtccccagcagtactctggactc
tcttgtcaggacccagcagatggttactaccgtctgaagcacaacataaccacagatata
tctcatccaatcgtggtgatcggggaggtggttcgctgtaactgtcaccgacactcggac
acctgcgaccgggagactggagtgtgtcagaactgtcagcacaacactacaggaagtcag
tgtcaaagatgtctgcctggtttctatggagatgctaccagaggttcatcggtggactgt
caaccctgtatctgtccaaccatagaaaataattttagcagtacgtgtgaaataaggcgt
ggtcagctgatatgcactaactgcacagagggttacacagggacaagatgtgaatcatgt
gctgatggttactatgggaacccaagacaagctggtggtcattgtttgccgtgtgattgt
aatcctgagggctcggtatcgtcttcctgtaacctccagggccagtgtcggtgtcttcca
ggaataactggagacaaatgtgatggatgtcagccgcgacatgccgtggaggatggaaga
tgtgtctcatgtgatgagggttgtacagctgacctaatgaaagagcttgatgacctgagt
aacatgactcatcaggtcaacctcacaggcaaacttcctgttccttggaaccaactgtgg
agaattcaaaatgaaacaattttactcaaggaagagttggagactatcaggacagccgaa
ctgagtcatttgaaatcgcaggcaaatgaccttgagcgagaggccgactctcttctcact
gaatctaggagagccaaacttcaggcgactcctctggaggagaaagctgtatctctgagg
aacaatgccacaaacctggaggccggcctcaatgaaacaatcagagacatgaaagacttt
gtggagaagctggtggatacggtgcaaagtctgttccacaataaaagtggaatcaatgtg
actgatgctctagaaaaggtcaaggtcatcctgaaggagatcaaggacaggaatttcaca
acaacattagatagagccatcaaggagaacaaattagcagaagaattgtcagagaaattg
ttaaatatgacgaacaagcttgtgaatacctctggaataatggatgacattcaggctcta
ttggataagctgctggacctccagaggcattccaacgagtccaagaaacagtctgacgaa
gtgttcaccctgattagtggcatatccagaatgcagaattcaacaatggacacggtgctg
gaaatagaccagaactatgataacttgatcgacgttctaggggagggacacacactcaac
ctagaggcagcagatcaactcagacaggtcaaggaaaacattgaggatatagaaaagaaa
gcaagtatttttgaccagattttgcctgaacttagaaagaaagtcaatggcacaaaatcc
cagataccagccgtagaaagtaaagtcagagaggctgaaagtcacgccaggaatctgtca
aactatgccgaacagttagagagggaatttgaaaaaaccaaagcagatgcggctgatccc
ctgaaggcggcccaggtgtatagtaatatcgtgaaggctgtcaatgaggcggaggaagcc
gccaaacgagcaatccaggcagctgaggagtccatcaaaattgctggagtgaaaaacatc
actgatgaagtgtcgcgctccctgaacaagagcagagaactcctgagacaagccaagcaa
actctgaggaaagtccctgagttagataggcatctagatgttttaaacaaagatttgctt
cgactggaagaagaacagagccagatcagacagggacagtcagatgtcaaggacattctc
aacctcctgcctgatgatctgagtgacagagcttcaaaggtttccaaggatatggacaag
acctccaatgatgtaaaagcattggacagaaaagtagatgatattgaaaacaacattcag
aactctctcatccccaagttcaatcagatcaagaatgttagattggatgaggtctttgaa
aacattgaaaattcaattgacacagctaaggaaaatgtgaagcagattggcgccattgtg
gagggagtggaagctgccgctaacagaaccataaccgctgagtcaagactcaacgacaaa
ctcaagatgctcagggacaacatcaaacaggctcgtgctcaggcagaaaaggtgaaggtg
tccctgtcggccagtggtcagtgtgtgaggtcctaccattccaagtctgtccccggggtc
accaacaaaatcagcttctccttcaagacaaacaacactaccaacaaccagatcttcctg
ctgcttcagaaatctcccacagaatttctagcagtggagatgataaatgctaagattcag
ttttcctggaatgttggagctggcgtggggagcgttaccagtgaccttcccattcagagt
gaggctaacttcatcaataccattgacaaatggtaccatgtcaaagccgacaggcttgga
agaattggaacattggaagttagtaagctctctaatgtaaatgctgctaagaaagtgact
ggggtctctcccgtgggccgatctttcctgaggcttgatgagaactctgatctgtatgtg
gccggtgtgccttatggaatagagaaatcatcagaattgagaagcacatccaatttctct
ggatgtatgaatgaaatgtacattgatgatcagaaaattggacttcacaactttaagacc
acctccaaacaaggctgttgggggtgcagaaatgtgcctgcagccaatgtggaacagact
gggaccttccacttcgatgggttggggtattcagccaaacctcaggtcagatcttacaga
agcacaacattttatgtaaagatggagttcaagacgttctggagagacgccatcttgctg
ttcactggaaacaataaaactggagattttctatatattggtatacaagatcagaaactg
gtcctgcagatctatactggtggcgacagttatctttcaatttccagcgcattaacgtat
aacgataacaagtggcataccatagttacagagcgagccaatctggatgcataccttcaa
gtagacggcacagacatgaaattcctcactgccaatggcagtaatactggtctagaattg
aaagggagaccactctattttggaggaattccagaaagttacgatttggaaccttttttg
aagtggggagctataaatagaactgggttcttgggctgtctccgtcaggtccagatccag
accttctcccaggatctactgaccggtgagaccgtcggtgtcaccaatggttgtccagca
gagggatacagaactataggtttctatgggaatggatttgcaaaatacaaggctgctacc
cttcctggggagaaaggtgacatttccctgtcatttagaaccacccagagggatgcacta
ttactgcttgcctacgataatgatcaaaggaatttttactcctttgttcttgttgatggg
aaagttgaaggaaggtttagtacaaacagtcttccacagaaaataaccacatcgaagact
tttaatgatgggcatttgcacaatgtagctattcaaaaagtcggaaacaggattacagtt
tatgttgatgacgaggcacagctagaagaagtgattcttggtagagaggaggtcaatgta
gatcacctatatattggaggtgtcatcgactacaacttccctcagggtcaagctatggca
gccacaacccaggggctagaggggtgtatcagtgacatcatcatcaatcaaaagattctc
aacctaaatgctcctctccagtttgagagagctgacattggaagatgtcgattgccgacc
aatggacattcccacaaccttcaggatgctcaaaccacaaaaccacctgccaccacccct
aaggcatccacctcaagacccagagatgtaaacccagtaaccaccactggtggtcctcca
gttagctgtgcacaaactcctaatctaccgcaaaacattcgatcacttatatttggaaat
tcacctaagagccatgggaaaattgtgattgatccagaggaagttcaagagtcattccag
atatcctttgacttccgtacattctatgagaatggatccatctttttactgagcaatgcc
aactactcggagtatatagctgctcagattttgaaaggctctgtggtagtgtattggaca
aataatggtggaaagataaagaaatatgtctcctccaaagttgtcaatagtggtcaatgg
cacactgctatcgtctccaaagaccggcggagaatcagcctggaggtggatgggaagacg
gagatggacaaacagaggattcccaagaagttgtctataacctcccccatgattgtcgga
agccttgtagatgatatcaacattaataatgatgacttgattaggcacagcttgcgtgga
tgtatgaagaacttcattgttaacactaagagtataatgatagctgacgctacacaagta
cagggagtcaccacatgttatataaatatggagcctggggttttcatgaacaaaaactcc
tatggagtgatagccaacaggtattcagttggtcgagaaatgaagatagcgttagaattc
cgcacccacaagcccaacggtatcctcctatctattaccgacaaccaggctgtcacactg
gagctacaccagggcaaggtgaagttctcggtgttcaatgtagcccttttcactgcaacg
tctaaggagacgaacctctgtgacgaccggtggcactctgtggaagccaagctgatcggg
aatgttgtggagctggtggttgacggcggtgattcccagtacggcagcagtcagaatacc
gccaggaatgtcaccacctcctccgccctctatgtgggaggagtgccagactatgcagtg
aagcagatagcttcatttaatcagatggaaggaacagcagagggatttgagggctgtcta
agaaacttcaagatagactccaccccggtagactggttctctctattagaacaggagaac
attcagcgaacaggatgtccttattaa
DBGET
integrated database retrieval system
