Magallana gigas (Pacific oyster): 105339684
Help
Entry
105339684 CDS
T03920
Name
(RefSeq) cytoplasmic polyadenylation element-binding protein 2
KO
K02602
cytoplasmic polyadenylation element-binding protein
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crg03019
]
105339684
Messenger RNA biogenesis [BR:
crg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105339684
Factors involved in mRNA localization
Trans-acting binding proteins
105339684
mRNA cycle factors
P-body specific factors
105339684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_7
CEBP_ZZ
RRM_1
HSP20
zf-B_box
Motif
Other DBs
NCBI-GeneID:
105339684
NCBI-ProteinID:
XP_011443647
UniProt:
A0A8W8IZY9
LinkDB
All DBs
Position
8:478862..493894
Genome browser
AA seq
634 aa
AA seq
DB search
MGDYGVAVATNIGGFSSLNSKNILQSKPIFSSDPRTMQDENIHEKTTSQHQQLTQVVAEN
GNIHGSEIRNKSDANGLTQEKKTDLLTSASSTQAHGTVMESFSSTAVVTSVTSPSSLWTN
QPPEEAVIPAYHSLNGTLTLSQFPAVHNNMYSAGIATHMGLNMAQQPPPPQRRAITGHHN
FPARQQQPGILINNNSKGYPNWSNAPQWSQQGQSWGNVHSTQHQRRSVPNFPSSLTAASF
QMKKSPVSYQQQITNTAPLIAPSRFRRSTSFPGQMHQAAMLKPGLEMGSMDDTHRESMLS
YQDRSNSYDSMRFTNFENQLLDIMRNSGDHADPMKVKSSFGFGELDEETLDSSLSVLGCG
PRGSPGSQGERIERFSRKVFVGGLPPDIDEEEITAAFRRFGVLVVDWPHKAESKSYFPPK
GYCFLLFQDEMSVQTLIEHCIVDDEKLYWCVSSPTMKDKPVQIRPWNLSDSDFVMDGSQP
LDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSY
IAAISARFVQLQHGEIDKRVEVKPYVLDDQMCDECQGSRCGGKFAPFFCANVTCLQYYCE
QCWAQIHSRPGREFHKPLVKEGADRPRAVPFRWC
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgggggattacggagttgcagtggccaccaacatcggaggattttcgtccctgaattct
aagaacattttacaaagtaagcccatattttcctctgatccgcgtacaatgcaagatgaa
aacatacacgagaaaaccacatctcagcatcagcaacttacacaagtcgtggcagagaac
ggaaacatacatggttcggaaataagaaacaaatctgacgcaaatggtttaactcaggag
aagaaaaccgatttattgacttcagctagttctacacaggcgcacggtaccgttatggag
tctttttcgtcaacagctgttgtgacatcagtgacttctccctcgagtttatggacaaac
caacccccagaggaagctgtgatacctgcataccactcactgaatgggactctgactctg
tcccagtttcctgcagtccacaacaacatgtacagtgcggggatagccacccatatgggt
ttgaacatggcacagcagcctccacctccacagaggcgagcaatcaccggccaccacaac
tttcctgcacgtcagcaacagcccggaatacttatcaacaacaactccaagggctatccc
aactggagtaatgctcctcaatggtctcaacaggggcagtcctggggaaatgtccactcc
actcagcaccagagacggtccgtgccaaacttcccttcctcgcttactgcagcctctttt
cagatgaagaaatcacctgtatcataccagcaacaaattacaaacactgctcccctaatt
gctccttcaagatttcggaggagcacatcttttcccggacaaatgcaccaggcagcgatg
ttaaaacctgggcttgaaatgggcagtatggacgacactcacagggaatctatgctctct
taccaggacagaagtaactcctatgacagtatgcggttcaccaactttgagaaccaactc
ctggacatcatgagaaactcgggagatcacgcagacccaatgaaagtgaagtcgtccttt
gggtttggagagttggatgaggagacgctggactcgagcctgtctgtgctggggtgtggt
ccccggggttcgcccggctctcagggggagaggatcgagcgattctccaggaaggtgttt
gttggtggactgccaccagacattgacgaagaggagatcacagcagctttccgcagattt
ggggtactggtggtggactggcctcataaagcagagagcaagtcctactttcctcctaaa
ggctactgtttcctgctgttccaagacgagatgtcggtgcagaccctgattgagcactgt
attgtggatgatgagaagctctactggtgtgtgtccagcccgaccatgaaagacaaaccg
gtccagattcggccctggaacctgagtgattctgactttgtgatggatggatcccaacca
ctggaccccaggaagaccatctttgtcgggggagtccccagacctctcagagcagtggag
ctggcaatgatcatggaccgcctgtacggaggagtctgctatgcagggattgacacagac
cctgaactgaagtatcccaagggggcagggcgtgtggccttctccaaccagcagagctac
atagcagccatcagtgccagatttgttcagctccagcacggggaaatagacaagagggtg
gaggtcaagccctatgttctggacgaccagatgtgtgacgagtgccagggatccaggtgt
ggtggcaagtttgctccatttttctgcgccaacgtcacctgtctgcagtactactgcgag
cagtgttgggcccagatccactcccggcccgggcgcgagttccacaaaccgctggtcaag
gagggcgcagacaggcccagggctgtcccgtttcgctggtgttag
DBGET
integrated database retrieval system
