Magallana gigas (Pacific oyster): 105339817
Help
Entry
105339817 CDS
T03920
Name
(RefSeq) nephrocystin-3 isoform X1
KO
K19360
nephrocystin-3
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
crg03037
]
105339817
Cilium and associated proteins [BR:
crg03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
105339817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
TPR_10
NPHP3
TPR_1
TPR_7
NPHP3_hel
TPR_8
TPR_2
TPR_MalT
TPR_16
TPR_14
TPR_19
DUF2225
TPR_11
TPR_17
ANAPC3
AAA_16
NACHT
14-3-3
NPHP3_N
MIT
AAA_22
Motif
Other DBs
NCBI-GeneID:
105339817
NCBI-ProteinID:
XP_011443854
UniProt:
K1QSG4
LinkDB
All DBs
Position
2:33075127..33090564
Genome browser
AA seq
1312 aa
AA seq
DB search
MGTGGSFLHNPEDDDIFGNDLNGSSHGVIKRIPVEIKPRGKLGIFSHGSSRNKRIGGSLQ
SALSVDLENPEAEKIKKEFEMYRLNKENDIADMKKKETRLQIENKRLRAELLVLQKTCTN
LRAERDKAIDAEQAAQARAAAFQSDRDKVQRNFKIFRENMELQLQTLLRDKRALENKIFK
VASGYSLEETEASNRPDFDASLGNANPGDWWTALESEPSLSNISQGHQTTLRGPEFAQCM
METEGPFNNINREDWSSVMTSLTKIIPSLPEHALSPVIRIYVSAPRDTQVEVEIFQKEHF
PRLAALCNGEGRELILIHLTMEDSVNPSPQMIERHQLTRKRQIEKSSIFVGFLGDATDRF
TSLEYKFGYLENNNNLSAVFSFRDGKGNRASHTEASELKNKVRQKGNAKIIDGYTAPSRG
VEQAVAEIEKMIKTEVGMDTGQERIEDDETIAGEMEGPDKICGGQVWDTHGDYEQMEAFN
FAIKSSCELGFEKHYERLNAHISSAGLLPPLLIIGTPGSGRSLLLAQWMNLQQEKTPSGL
VLYHFVGSETSVSADPIFMIRRLTSQLMQKVNSPPALTADPIRLVEEFPRWLEKVSEKTP
GGVILVLDSINRFQQAEIHLKWLLDPLPVDVRVIVTADEETCPQAWRAWPTLHVEPLSNK
NVKELIHAELATMDAQIGSEDSLILTHCRTPATCSPLYVMVLTRHIAGYLKHDGQVGSQL
DVLLTCQDCVSLYGKILDLLRISLESQETRGFLKSILRYLYASRGGLCETELLALIPHLT
VNFLSVFTEVLTDHLVLKYQGGLLTFAHEQVRYAVQDYCFGKDEAKLVVQLRKDLTRYFS
QFMNPGQVTCRVADELPWLLKIDGDKESLQKCILNLCIFQRLYARGRCAELISYWQFITA
DKNSMAQAYFTATRKMEEVVGQNGGLITLPRIADMYESLGRFLKDLGLLNQAVPALQRAL
EIREIALDPDHPIVARSHHQLAGLHAQWGKFSTAEAFYKQALDIYVDRYGSDHYLVAKEL
DALAVLYQKQDKHDLAEPLKKRAVSIRKKVKTPRSNSGQMKSVVQRRALQLEELAIGPDS
PDLARTLNELGVLHYLQNDLEAAESLLKRSLEMREATLGSDHPDIAQSLNNLAALYNDRK
QYDKAEPLYERALQIRLQHFSVNHDSVASVIKHLALLYRKQGKFEKAEPLYKRAIEIREK
SFGSDHPSVATACVNLAVLYSQQNKYTEAEPLYKRALQIYEESMGPHHPRVAETLRNLAV
MKYEMRDFETAAKLYKRATEIKDGDNSYGVKVMSRRCSSSDTNSTVKLMMNS
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgggaactggtgggtcgtttctgcataatccagaggatgatgatatatttggcaacgat
ttaaatggaagcagtcatggtgtcatcaagagaattcctgtagaaataaaaccaagagga
aagttgggtatatttagtcatggctccagcagaaacaagaggattgggggtagtttgcag
tctgcgctgtcggtggatttggagaatccagaagcggaaaagatcaagaaggagttcgag
atgtatagactaaacaaagagaatgacatcgcagacatgaagaagaaagaaacgaggtta
cagatagaaaacaagagactgcgggcggaactattggtgttacagaagacatgtaccaat
ctgagggcagagagagacaaagccattgatgcggaacaagctgctcaagcccgagcggca
gcatttcaaagtgacagggacaaagttcagaggaatttcaaaatattcagagaaaatatg
gaattacagctgcagactctactaagagataaacgagccctagaaaacaagatattcaaa
gtggcatcaggttatagcctagaggaaactgaagcatctaacaggcctgactttgatgca
tcactaggaaacgccaaccctggagactggtggactgccttggagagtgaaccatcacta
agtaacataagccaggggcaccagactacactaaggggaccagaatttgctcagtgtatg
atggagaccgaggggccattcaacaacatcaacagggaggactggagttctgtgatgacc
agtctaaccaaaatcatccccagtctccccgagcatgccctgagtccggtcataaggatc
tatgtatccgcccctagggacacacaggtagaagtggagatattccagaaggagcacttc
cctagactggctgccctgtgtaatggggaagggagggagctgatattgatacacctcaca
atggaagactcggtcaacccttctcctcagatgattgaaagacaccagttgacaaggaag
agacagatagagaagtcgtcaatatttgtgggttttcttggagatgctaccgacaggttt
actagtctggaatacaaatttggttatttggagaataacaacaatctctcagctgtattt
tcattcagagatgggaaaggtaacagggcaagtcatacggaagccagtgaattaaagaac
aaagtcaggcaaaaaggaaatgctaaaatcattgatggctacacagcaccttcaagagga
gtagagcaagctgtcgcagaaatagaaaaaatgattaaaacagaggtgggtatggacact
ggacaggagagaattgaggatgatgagacgatcgcgggggagatggagggaccggacaag
atctgtgggggacaggtgtgggacacacatggggattatgaacagatggaggcgtttaat
ttcgccatcaaatccagctgtgagcttggctttgaaaagcattacgagagattgaatgcc
cacatttcttctgctggtctccttccaccattgttgatcattggtaccccaggatctggc
agatctttgctgctggctcagtggatgaatttacaacaggagaagaccccgtctggtcta
gtgttgtaccactttgtggggtcagagacgtcagtcagtgctgaccctatctttatgatc
aggcgattaacttctcagttgatgcagaaggtgaactcccctcctgccctgacggccgac
ccaatcagactggtggaggaatttccaagatggctggaaaaagtctcggagaaaactcct
ggtggagtcatcctggtcctagactccatcaacagattccagcaagcagagatacacttg
aaatggttgctggatccattacctgtggatgttagggtcattgtgacggccgatgaagag
acctgtcctcaggcctggagagcatggcccacccttcatgttgaaccactcagcaataag
aacgtgaaggagctgatccatgccgaacttgccacaatggacgcacagatcggttcagag
gacagcttgatcctgacacactgtaggacccccgccacctgtagtcctctctatgtcatg
gtcctgaccaggcacattgcagggtatttaaagcatgatggccaggtgggatcacaactg
gatgtgttattgacttgtcaggattgtgtcagtctgtatggaaaaatcctggatctgctc
cggatcagtctggaatcccaggagacaaggggattccttaaatcaatactgcgatacctg
tatgcaagtcgaggtggcctatgtgagacagagttgctggccctgatcccacacctcacc
gtgaacttcctgtccgtttttactgaggtcctcactgaccacctagtgctcaaataccaa
gggggactactcacatttgctcacgaacaagttaggtatgctgttcaggactactgcttt
ggaaaggatgaggccaaacttgtggttcaactgaggaaagatctcacccgatacttctca
cagttcatgaatccagggcaagtaacatgcagagtagctgatgagttgccatggttacta
aagatagatggagacaaagagagtctgcagaaatgcatattgaatctctgtatattccaa
agactttatgcaaggggcaggtgtgcagagttgatcagttactggcagtttattactgct
gacaagaacagcatggcacaggcttacttcacagcaaccaggaaaatggaggaggtggta
ggtcagaatggtggcctgatcactctcccccgcatagccgacatgtacgagtctctggga
cgcttcctcaaagacctgggactcctcaaccaggctgttccagctctacaaagagcattg
gagatccgagagattgctctggacccagaccatcccatcgtagctcggtcacatcaccag
ttggcaggactccacgctcagtgggggaagttctccaccgccgaggccttctacaaacag
gccctggacatttatgtggacagatacggctccgatcactatctagtggccaaggaactg
gatgctctcgccgtgctgtaccagaaacaggacaagcatgacctagccgaacctctgaag
aagcgagctgtttctatcagaaagaaagtaaagactcctaggtctaattctggccagatg
aaatcagtggtacaaagaagagctcttcaacttgaggagttagcaataggcccagactca
cctgacctggcgagaacccttaatgagcttggagttctgcattacttacaaaatgaccta
gaagcagcagaatctctcttgaagagatcattggagatgagagaagcaacactgggcagc
gatcaccctgacattgctcagtcactgaacaacttggcagctctgtacaacgacaggaaa
cagtatgacaaagcggagcctctgtatgagagagctctacaaataagactccagcatttc
agtgtaaaccatgacagtgtagcctcagtcatcaaacacctggcactgctgtaccggaaa
cagggtaaatttgagaaggcagagcctctgtataagcgagctatagagataagagagaag
tcttttggatcagaccacccctctgtagccactgcctgtgtcaacctggccgtcctgtac
tcacagcagaacaaatatactgaagcagagccactgtataagagggccctgcagatctat
gaggagagcatgggtccccatcaccccagggtggcagagaccttgagaaaccttgcagtc
atgaaatatgaaatgagagactttgagactgcagccaaactgtacaagagagccacagaa
atcaaggacggggataattcatatggggtcaaggtcatgtcacggaggtgttcaagcagc
gacacaaattctacagtcaaattgatgatgaactcatag
DBGET
integrated database retrieval system
