Magallana gigas (Pacific oyster): 105339845
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Entry
105339845 CDS
T03920
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105339845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crg03019
]
105339845
03012 Translation factors [BR:
crg03012
]
105339845
Messenger RNA biogenesis [BR:
crg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
105339845
Translation factors [BR:
crg03012
]
Eukaryotic type
Release factors
105339845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Myc_N
Motif
Other DBs
NCBI-GeneID:
105339845
NCBI-ProteinID:
XP_065921620
LinkDB
All DBs
Position
7:28402829..28412468
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AA seq
555 aa
AA seq
DB search
MTENGESLAPDSWDQEDAQATSDVASQLSNLNVNAPAFVPGQNVFAAEFVPSFQKEAPAE
VQETPNVAEPPPTEQDKSDTAETEMEATEKWEDEAAEDADMNEEEEEEEEDEPAPVKSLA
QESLGPKKEHVNVVFIGHVDAGKSTIGGHIMYLTGMVDKRTLEKYEREAKEKNRETWYLS
WALDTNLEEREKGKTVEVGRAFFETENRHFTILDAPGHKSFVPNMIGGASQADLAVLVIS
ARKGEFETGFERGGQTREHAMLVKTAGVKHLVVVINKMDDPTVMWSEDRFNECKEKLLPY
LKKCGFNPKTDIFFLPVSGLTGAFLKDIPDESVCPWYRGPSLITYLDTMPSFNRSINQPV
RMPIVDRYKDMGILLLGKLESGCIFRNQTFLLMPNRASVKIMQIFSDDIEVEEANPGENL
KLKVTGVEEEDVSPGFVLCPSNSLCHTAKTFDAQIVILEHKSIICAGYSAILHIHACAEE
VTIKTLLCIIDKKTGEKAQLKPRFVKQDQVAIARIEVNGGMICLETFKDFPQMGRFTLRD
EGKTIAIGKVLKIRE
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaaacggggagagtctcgccccagattcctgggatcaagaggacgcccaagcc
acgagtgatgttgcatcacagttgtcaaatctcaacgtcaatgccccagcatttgttcca
gggcaaaatgtatttgcagcagagtttgtgccttcttttcaaaaagaggccccagcagaa
gtacaagaaacaccaaatgttgcagaacccccaccaactgagcaagataaatcagacact
gctgagacggaaatggaggccacagagaagtgggaagatgaggcggcagaggatgctgat
atgaacgaggaggaggaagaggaggaggaggatgaacccgctcccgtcaaatcactagct
caggaaagcctggggcccaagaaagaacacgtcaatgttgtcttcataggacatgtcgat
gccggaaaatcaactattggaggacatattatgtatcttacgggtatggtagacaaacgt
acgctagaaaaatatgagagagaggccaaggaaaagaacagagaaacatggtatttgtca
tgggcattagacacaaacttggaggagagagaaaagggaaagacagtagaggtgggcagg
gccttttttgaaacagaaaacaggcacttcactatcttggatgctcctgggcacaaaagc
tttgtaccaaacatgattggtggggcatcgcaagcagatttggctgtattggtgatctct
gcccgtaaaggagagtttgagacaggatttgagagaggtggacagaccagagagcatgct
atgttagtgaagactgctggagtcaaacatttggttgttgtcatcaacaagatggatgac
ccaactgtcatgtggtcagaggatagattcaacgagtgcaaagagaaattactaccttac
ctaaagaagtgtgggttcaatccaaagacagacatcttcttcttacctgtctccggatta
actggtgcattcctgaaagacatacctgacgagtctgtatgtccgtggtacagagggcca
tcactgattacctacctagacacaatgccttcattcaacagatccataaaccaacctgtc
cgcatgcctattgtagacagatacaaggatatgggcatcttgctactaggaaaattagaa
tctggatgcatatttcggaaccaaacattcctgctaatgccaaacagagccagtgtcaaa
atcatgcaaattttctcggatgacattgaagtggaagaggccaatccaggagaaaatctc
aaactgaaagtgaccggagtggaagaagaggatgtatcgcctgggtttgtattgtgtcct
tccaatagtctatgccacacagcaaaaacatttgatgctcagattgtgatactggaacac
aagtccattatttgtgcgggatatagtgctattctacacattcatgcatgtgcagaagaa
gtaacgatcaagaccctactgtgtatcatagacaaaaagactggcgaaaaggcccaactg
aaacctagatttgtgaaacaagatcaggtggcaatagcaagaatagaagtcaacggagga
atgatctgtttagagacattcaaagatttccctcagatgggacgatttacattacgagat
gaaggaaaaacgattgcaataggaaaagttctaaagatccgtgaataa
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