Magallana gigas (Pacific oyster): 105339907
Help
Entry
105339907 CDS
T03920
Name
(RefSeq) speckle targeted PIP5K1A-regulated poly(A) polymerase
KO
K18709
speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:
2.7.7.19
2.7.7.52
]
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crg03019
]
105339907
Enzymes [BR:
crg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
105339907
2.7.7.52 RNA uridylyltransferase
105339907
Messenger RNA biogenesis [BR:
crg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
105339907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
RRM_1
zf-met
TUTase
zf-C2H2_jaz
RL
DUF4321
Motif
Other DBs
NCBI-GeneID:
105339907
NCBI-ProteinID:
XP_011443992
LinkDB
All DBs
Position
5:56262699..56273024
Genome browser
AA seq
932 aa
AA seq
DB search
MFVICDICQCEISSADLYEYHVNGKRHQVQLERYKRRKDESERSVYARGFPPSTQEHELL
AYFCMFGPVEKIVYDEKKSMKTKVPAFAIVEFKSADTARSVATYGQHVINSQRIEIRPRT
FKELRTEPYFPWQREDNNRDLPWQKYNELHQKLSANNIQMGPYEAAQPRRKGKIKGPAPI
KQGRAKDSEGQDIVPIDVKEFQTYLEQHQCVGIQTQVMLLVELTQVTTAEFQSRYTICKT
LEDALSPFFPGMTVNQFGSSVNGFGIKGCDMDVYIDLTKLGIPCRTSNIVLPYIKDLYTL
KKKNSGPLSQQEVDNMRPMDKLKLIQRIITEHAPSCMDTRIIPSQRCPILRFTDYNSQIK
CDLSINNKLALQNTRLLQTFSLFDARIKPLVYSIRYWAKLKGIAGNPQACNRLSSYALTM
LVIYYLMNTTPPILPPVEELSRMCGRDRTIVDQWDCSFVSAQFMPPTPNIQTIEELLYGF
FQYFSHFDFLANPMSVRTGKPITLDLSVLEKTLKVGVIILQDPFVLNHNITQNVNEKMLT
KIVKEMQLAVVKSERWFDVANAETKSIMDIFSEDVPVGFQPKKLKMSRKPKGLAEIGPYQ
FLIDMNMDKLSRADIQTLQASGNMRLTWCKKMIVFLYRQIERLLMFDCELAVVNLPVTLK
PSRTYSVYRHVGQPLRPITEEQGTEQEMEGQEEGMEGQQDVGTSQEVEKNWSDPNQPSTS
QGDDQHFAEEAEESSQPQMTAPGGEEYADVDFGSHGGWAPAGEGPTLPHVVDGTELVPVE
NPLDNDEEDEEEATQRKEEEQRRFEEEENQRQDPSYIQYDFGDSEYYVDMDVKVMCRIWV
ERKNLIKELKERGFKENLQLEQIVSERLFYEVHGPAQKPITEFRCVMRSLVSDSGASVLV
DCMADTRQKEYDCIYHYMKKFVLKNVDKFFYA
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttatttgcgatatatgtcagtgtgaaatatcctcagcggatctttatgaatac
cacgtcaatgggaagagacatcaggtccaactggagcggtacaaacgccggaaggacgag
tccgagcgcagtgtgtacgcccggggattcccaccctccacccaggagcacgaactgctg
gcctacttctgcatgtttggaccggtggaaaaaatagtttatgatgaaaagaaatccatg
aaaactaaagttcctgcttttgccattgtggagtttaaatcagctgacacagcaagatca
gtggcaacttatgggcagcacgtcattaacagtcagcgcatagagatcaggccacgcaca
tttaaagaactgcgaacagagccctactttccatggcaacgggaagataacaatagggat
ctgccgtggcagaagtataacgagttacaccaaaagctgtccgccaacaacatacagatg
ggtccctacgaagccgctcaaccacggcgcaaggggaaaataaaaggccccgcacccatc
aagcaggggagagccaaggattccgagggtcaggacatcgtacccatcgatgtgaaggag
ttccagacttatctggagcagcatcagtgtgtcgggattcagacccaggtgatgttgtta
gtagagctaacccaggtcaccacagccgaattccagtctcgctacacgatctgtaaaact
ctggaggacgcactcagtccgttctttccaggaatgacagtgaatcagtttggatcctcg
gtcaatggttttggaatcaagggctgtgacatggacgtctacattgatctgacaaaactg
ggaattccctgccgaacctcaaacatagtacttccctacatcaaggacctgtacacactg
aagaagaagaacagtggccccctctcccaacaggaagtggacaacatgcgccccatggac
aaactgaagctcatccagcgcatcatcactgagcacgctccgtcgtgcatggacacacgc
atcatcccgagccagcgctgtccgatcctgcgattcactgactacaactcccagatcaag
tgtgacctctctatcaataataaactggcccttcagaacacgcgcctcctgcaaaccttc
agtctgtttgacgctaggataaagcccctggtctactcaatcaggtactgggccaagctg
aagggcatcgcggggaacccccaggcctgtaaccgcctgtcctcctacgccctaaccatg
ctggtcatctactacctgatgaacaccacgcccccgatactacccccggtggaggagctc
tccaggatgtgtgggagagataggaccattgttgaccaatgggattgttcctttgtgtcg
gctcagttcatgcctcccacccccaacatacagaccatagaggagctactgtatgggttc
ttccagtacttcagccattttgatttcctggctaatcccatgtctgtgaggacagggaaa
cctatcaccttggatctgtcggtgctggaaaagacactcaaggttggagtaatcatcctt
caggatccctttgttctcaatcacaacatcacacagaacgttaacgagaagatgctgact
aaaatagtgaaggagatgcagcttgctgtcgtgaaatcagagcgatggttcgatgttgca
aatgcagaaacaaaaagtatcatggacatttttagtgaggacgtccctgtgggattccaa
ccaaaaaaactgaagatgtccaggaaacctaagggcctagcggagatcggaccgtaccag
ttcttgattgacatgaatatggacaagctgtcgcgggcggacatccaaacactgcaggcc
tcggggaacatgcgactcacatggtgtaagaagatgattgtgttcctgtatcgacagatc
gagcgactcctgatgtttgactgcgaactggctgtggttaatctcccagtgacgctcaaa
ccgtcccgaacttactctgtatacagacacgttggacaacccctccgccccattacagag
gaacagggcacggagcaagagatggagggtcaagaggaaggaatggaaggtcagcaggat
gtggggaccagccaagaggtggagaaaaactggtcagatccgaaccagccaagcacttcc
cagggagatgaccagcacttcgctgaggaagctgaagaaagctcccaaccccagatgact
gcccctgggggtgaggagtacgctgatgtagactttgggagccatgggggctgggcacct
gctggggagggccccacccttccacatgtagtggatggaacagaactagtccctgtagaa
aacccactagacaatgatgaagaagatgaagaggaagcaacgcagagaaaggaagaagag
cagaggagatttgaggaagaggagaaccagcgacaagatccgtcttatattcagtatgat
tttggagattctgagtattacgtcgatatggatgtcaaagtcatgtgtaggatttgggtg
gagcgaaaaaatctgataaaggagttaaaagaaagagggtttaaggaaaacttgcagtta
gaacaaattgtgtctgagaggctattctacgaggtgcatgggcccgcccagaagccaatc
acagagttccggtgtgtgatgcgatccttggtctctgatagtggggcctcagtgctcgtg
gattgtatggctgatacacgacaaaaggaatacgactgtatttatcattacatgaagaag
tttgtcctcaaaaatgtcgacaaattcttttatgcgtaa
DBGET
integrated database retrieval system
