Magallana gigas (Pacific oyster): 105339947
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Entry
105339947 CDS
T03920
Name
(RefSeq) talin-1 isoform X1
KO
K06271
talin
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105339947
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crg04147
]
105339947
Exosome [BR:
crg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105339947
Exosomal proteins of other cancer cells
105339947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Talin_IBS2B
TLN1-like_RS
I_LWEQ
Talin_R4
Talin_middle
VBS
FERM_f0
IRS
FERM_M
RA_2
FERM_N
DUF7783
Rad60-SLD
OTU1_UBXL
ubiquitin
Motif
Other DBs
NCBI-GeneID:
105339947
NCBI-ProteinID:
XP_065936984
LinkDB
All DBs
Position
1:complement(3813332..3905986)
Genome browser
AA seq
2589 aa
AA seq
DB search
MAMLSLKISVVGNNVVKTMQFDPAMQVYDACKVIRDRIIETNPGNPQDYGLFLADEDPKK
GVWLEPGRTLDYYLLRDGDLLEYKKKMRILQIKTLDGMQKKLQVDDSHTVGQLMVTICTK
MGISNHEEYSLVREMTDDEKEKTLTLRRDKSIAKDQKKLDEMRKKLHTDDELEWLDHSRT
LREQGVLDVDTLLLRRKFFFSDQNVDQRDPVQLNLLYVQSRDAILDGTHPVTQEEAIQLA
GIQAHIQFGDYNENKHKTGFLELKEFLPKEYVKTQKIEKRIFAEHKKWVGVHEFEAKAKY
TQKCRGLKTYGITFFLVKEKMPGKNKLVPRLLGITKESVVRMDEKTKEILKTWPLTTVKR
WAASPNSFTLDFGDYSDSYYSVQTQEGEQISRLIAGYIDIILKRKKDKDHLGIEGSDEAP
MYEDSVSPAKATIISRMQGNVSHPDVGNVALPGVMRGGVSGENTISHGSMSSAQHGQVSS
EMHHVHGNRQSQNIQEHGLSQSQRALLTCIEEGITSIRQAESQMDKGAALPNLGNDAASK
KWRQNMLDLSRQKVGAQLSAMNAATAQLVTMSIDDEIDTSRVGAAVAQITSNIDDFSQDV
RMLGALQDDDASRNKLLGAAKRLCGAFSDLLNAAEPGQKEGKSNLITAAKTVGEASQEVM
TGIGETADDMDRMYQETLLALAKAVANATAQLVLKAKSVASTTEDQGLQNKVISSATSCA
LATSQLVACTKVVAPTISSPACQEQLIDAAKGVAHSVEGIVEAAQQSCRDDKLLADLGAA
ATAVTQALNDLLQHIKKGAGPTAAGESHEDAVDTILTVTDRLFSSVGDAHEMVRQARQLA
QATSSLVGAIRGEAEGHSDSDMQKRLLAAARQLADATANMVEAAKGCASSPNDSEQQKRL
RGAAEDLRAATNIAASNALKKKLIRRLENAARRTASATTQLINASKNANKSNTNKTSEHQ
LTQQCQIMNEQLPLLIQGFRGSETNQDSATAQLQLINASKEFIQPASQLVSAANAAAPTV
GDQAASMNMNQAVKTMTTALAELRTASGKAEEMCISLEVDAALDQLTELDRELEEYRRAA
DSGNLVPLPGETVEASAMKLGSTSKNVGSAMAQLLTAASQGNENYVGVAARDTANALRVL
TEATRGVASTSEDIEVRRQVIDSARDVIDKSTHLLEETKRAMNDPENPENQARLNQVAKA
VSSALNNCVNALPGQRDVDNAIRQITDSSQELASTKYPSTDRTFQEIQIEINNAAVNLNQ
AASDIVTASRGTPKQLAESSREYSSSYSEFIKSGLTMAGLSKDGDTQNQIVGGLKNVSMV
SSKLLLAAKSVSADPNAPNTKNLLSQAARAVTESINQLINVCTVSAPGQKECDNALRQIQ
MMKSMLESANEPVTDLSYFECLDSVMEKSKLLGDSMTGITNHAKKGDLENFCDSVGNFST
SVCGLTEAASQAAYLVGIADGASEPGRPGLVDQSQFARANQAIQMACQNLVNPASSQQQY
YMAESCRSMVLSAATVVAKHTSALCNACRLASSKTSNPVAKRHFVQSAKDVANSTANLVK
AIKALDQDFTEENRQRCAEAAKPLTDAVDELTTFASSPEFASMPAKISPEARKAQEPIVS
AGKAMIDGACHMVTAAKQLAVNPKDPPTYQLYSNHSKSVSEAIKRLVSSIKDCAPGQREC
DESIDKLNRSIRDLDQASLAAISQSLQQRTEKSLRGFQEQMIGSAREIHDLCSKVKDSAK
AEPENLGHRVTMMASYFGPLSDGAVGAASLIQNSKQQTHILDLTKTVAESALQFMYSCKE
GGGNPKAPKHTHDNIDTAADNTMDVVQDLLQSLEEAASQAGVVNSMIEKLTKSITKTDEQ
VMVREGMSFVEYQSNMVSLAKKIAMTTQEMVGKAGVNPGDLGRLANQLTRDYDVLASNSA
NAAATSNSQDIANRIRTTVQDLGKSCVELVQDAGKVQGDPHDTYARRDLQDHARSVSEKV
AFVLAALQSGSRGTQACINAASAVSGIIADLDTTIMFATAGTLCTEGDDSFASHREDILK
TAKALVEETKKLVQGAASDQETLAGAAQQAVKTITKLADVVKLGAASLGSNQPEAQVMII
NAVKDVASALSDLISATKNASGKNVSDPAMMTLKESAKVMVTNVTSLLKTVKTVEDEAAR
GTRALESTIEAIGQEVKSYEAGTLPEKKATAEDLIRLTKPITTATAKAVAAGNSGRQEDV
IICANMGRKAIFDLLATCRGTASTAETTEVRQKTIAAGKNCAVVYKDLLEQVSTVVQKPS
QEAKQTLAARAHQVAVSVQEIVHCSELIKVGQPAEGASKEIRWSHIVKGTDWVDPEDPTV
IAESELLTAAKSIEAAAQKLSQLKPRKKAKEADMSLNFEEQILEAAKSIASATAALVKSA
SAAQRELVAQGKVRTRKEIGATYHKSQILDDDGQWSEGLISAAKMVAAATHSLCESANAM
VQGHATEERLIASAKEVAGSTAHLLVACRVKADPDSVAMKRLQAAGNAVKRATEVLVKAA
QQAKQRDEDEDINVAVDSRKVGGIKQELQIQEEMLRKEREWIEAREKLAKFRKQRYKDTG
HDSDSSSAF
NT seq
7770 nt
NT seq
+upstream
nt +downstream
nt
atggccatgctctcgctcaagatcagcgtggtgggaaacaatgtcgtcaagacgatgcag
ttcgaccccgccatgcaggtgtacgacgcctgtaaggtcatccgcgaccggatcatagag
accaacccaggcaatccacaagactatggactattcctggcagatgaggatcccaagaaa
ggggtgtggctagagccaggcaggacgctggactattatctcctcagggacggggattta
ttggaatacaagaagaaaatgcgaattctacaaatcaaaacgttggacggcatgcagaag
aagttacaagtagatgacagccacacggtgggacagctgatggtcaccatctgtaccaag
atgggtatctctaaccatgaggaatactccttggtccgcgagatgacggacgacgagaaa
gagaaaacgctgactctccgccgagacaagtccatcgccaaggaccagaagaaactcgac
gagatgagaaagaaactccacacggacgacgaactggagtggttggaccattcgcggacc
ctgagagaacagggggtgttggacgtggacacactactgctgaggaggaagttctttttc
tccgaccaaaatgtggaccagcgcgaccctgtacaactcaatctgctatacgtacagtcc
cgagacgccatcttggacgggacccacccggtcactcaggaggaggcgatccagctggcc
gggatacaggcacacatacagtttggggactacaacgaaaacaaacacaagacgggattc
ctagaattaaaggagtttttaccaaaagaatatgtcaaaacacagaaaatagaaaagaga
atatttgcagaacacaagaagtgggttggcgtccatgagtttgaggccaaggccaagtac
actcaaaaatgtcgcggactcaagacttatggaatcactttcttccttgtcaaagaaaaa
atgcctggaaagaataaactggtgccccgcttgcttggtatcacaaaagaaagcgtggtt
aggatggacgaaaaaacgaaagagatcctgaagacctggccgctgaccacagtgaagaga
tgggccgcctcccccaacagcttcaccctggattttggagactactcagactcttattac
tcggtccaaactcaggaaggcgagcagatatctcgactcatcgccggatacatcgacatc
atcctcaaacggaaaaaagacaaggaccatctgggtatagagggctcggacgaggcccca
atgtacgaagacagcgtgtcgccggccaaggcgaccattatttcccgtatgcagggaaac
gtcagtcatcccgacgttggaaacgtggccctgccaggggtgatgagaggcggagtctcg
ggggaaaacaccatctcccacgggtcaatgtcatccgcccaacacggacaggtctctagc
gaaatgcatcatgtgcatggcaacagacagagtcagaacatacaggagcacggtctgtcc
cagtcccagagggccctgctgacctgtatagaggaggggatcacctcaataagacaggcc
gagtctcagatggacaaaggcgccgcgctgcccaacctcggaaacgacgccgcttccaaa
aagtggagacagaacatgctagacttgtcacggcagaaggtcggggcccagctctccgcg
atgaacgccgccaccgcccagctggttaccatgtcgatagatgacgagatagacacgagc
cgcgtgggtgctgccgtggcacagataacgtcaaacattgacgacttctctcaggacgtg
aggatgctgggagctctccaggacgacgacgctagtcgtaacaaactcctgggggctgcc
aaacgcctgtgtggtgctttctctgacctcctgaacgctgccgaacccgggcagaaagag
ggtaaatctaacctgatcacggcggctaagacggtcggcgaggcatcacaggaagtgatg
acaggcatcggagagacggccgacgacatggacaggatgtaccaggagacattgctagct
cttgctaaggcagtggccaatgcgacggcccagctcgtcctgaaggccaagagtgtggcc
agcaccaccgaggaccaggggcttcagaacaaggtcatcagctcagcgaccagctgtgcc
ctcgcgacgtcacagctcgtggcctgtaccaaggtggtggctccgaccatcagtagcccg
gcctgtcaggaacagctgatagacgccgcaaagggtgtggctcactctgtggagggaatc
gtggaggcggcccagcagtcctgccgcgacgacaagcttctggccgacctaggcgccgca
gccaccgcggttactcaggctcttaacgacctgctacagcacatcaagaagggggcaggg
ccaaccgcggctggggaatcccacgaggatgcagtggacacgatcctgactgtgacggac
agactgttcagtagtgtgggggacgcccacgagatggtgagacaggccaggcagctagct
caggcgacctcttcattggttggggccatcaggggagaagccgagggccactctgactcg
gacatgcagaagcggctcctggccgccgccagacaactcgctgatgccaccgcgaacatg
gtggaagctgccaagggctgtgcgtcgagtccgaacgactcggagcagcagaagagacta
cgaggcgctgcagaggatctccgggctgccacaaatatcgccgccagcaacgccctcaaa
aagaaactcatcaggaggctagagaacgccgcgcgtcgtaccgcctcagccaccacacag
ctgattaacgcctcaaagaacgctaacaaatccaacactaacaaaacctcggaacatcaa
ctgactcaacaatgtcagatcatgaatgaacagctgcctctgttgatccaaggattccgg
ggatctgagacaaaccaggacagcgctacagcccagctacaactgattaatgccagcaag
gaatttatacagcctgccagtcagctggtatccgccgcaaacgccgcagccccaacggtt
ggagatcaagccgcaagcatgaacatgaaccaggcagtgaagacgatgaccaccgcgctc
gctgagctgagaaccgcctctgggaaggcagaggagatgtgtatctcactggaggttgat
gccgcgcttgatcagctgaccgaactcgaccgcgagctggaggagtaccgcagagccgcc
gacagcggtaaccttgtgccactacccggtgaaacggtggaggcgtcggccatgaaactt
ggctccacctctaagaacgtgggatcggcgatggctcagctactgacggctgcctcacag
ggcaatgagaattacgtgggtgtagcagccagggacaccgcgaacgctctccgcgtgctg
acagaagccacgcgcggtgtcgcctcaacctcagaagacatcgaggtcagacggcaagtg
atcgacagcgcccgtgacgtcatcgacaagtcgacgcatctactggaggagacgaagcga
gccatgaacgacccagaaaaccctgagaaccaggctcgacttaaccaggtggccaaggct
gtgtcgagtgcgctcaacaactgtgtgaacgcccttcccggacagagagacgtggataac
gccatcagacagatcacagactcgagccaggagctggcgtccaccaagtacccgagcaca
gaccgcacgttccaggagatccagatcgagatcaacaacgccgctgtcaatctcaaccag
gccgccagtgacatcgtcaccgcatctcgtggcacacctaaacaactcgccgagtcatct
cgcgagtacagctcgtcttactcagagttcatcaaatctggactcaccatggcaggtctg
tccaaggatggagacacacagaaccagattgtgggcggactgaagaacgtctccatggtt
tccagtaaactgctgctggctgccaaatctgtgtcggccgatccaaacgctcccaacacc
aagaatctgctctcgcaggccgccagagcggtgacggagagcattaaccagctgatcaac
gtctgtactgtgtcggctccagggcagaaggagtgtgataacgccctcagacagatacag
atgatgaaatctatgctggagagtgccaatgaaccagtgactgacctgtcgtatttcgaa
tgtctggactccgtcatggagaaatctaagctgttgggagactctatgactgggatcact
aaccacgccaagaagggtgacctggagaacttctgtgactccgtggggaacttctcaaca
tctgtttgtggactcactgaggccgcctcacaggcagcttaccttgtgggcatcgctgat
ggagcgtcagagcccggaaggcccgggctggtggaccagtcccagtttgcccgggctaac
caggccatacagatggcgtgtcagaacctggttaacccggccagctcccagcaacagtat
tacatggcggaaagctgtaggtcaatggtgttgtcagcagcaacagtggttgctaagcac
acgtcagccctgtgtaacgcctgtcgcctggcctccagcaagacctccaatcctgtcgct
aagcgacactttgtacagagtgccaaggacgttgccaacagcacagccaacctggtcaag
gccatcaaggcgctggaccaggatttcaccgaggagaaccgccagcgatgtgcggaggcc
gccaaaccactgacagatgcagtggatgaactcaccacatttgcctcctctcccgagttt
gccagcatgccagccaagatcagccctgaggcaaggaaggcccaagagcccattgtgtcg
gcaggtaaggcgatgatcgatggagcgtgtcacatggtgacggccgccaaacagctggct
gtcaacccgaaggacccgcccacttaccaactgtactccaaccactccaagagtgtgtcc
gaggccatcaaacgactcgtgtcctccatcaaggactgtgcgccgggtcagcgtgagtgt
gacgagtcgatcgacaaactgaaccgctccatccgcgacctggaccaggcctcactggcc
gccatcagtcagagtctacagcaacggaccgagaaatccctcaggggattccaagaacag
atgattgggagtgcaagagaaatccatgacctttgttccaaggtcaaggactcagctaaa
gcagagccggagaatctgggtcacagggtgacaatgatggccagctacttcggcccactc
tcggacggtgctgtaggcgccgcctcgctgatccagaactccaaacaacagacccacatc
ctggacctgactaagaccgtggccgagtcggcacttcagttcatgtactcctgtaaggaa
gggggaggcaaccctaaggcccctaagcacacccatgataacattgacacagcagcagac
aacacaatggacgtcgtacaagacctgttacagtctctggaggaggccgcctcacaggcc
ggcgtagtcaacagtatgatagagaaactcaccaaatcaatcactaagacggacgagcag
gtaatggtgagggaggggatgtccttcgtggagtaccagtccaacatggtcagtctggcc
aagaagatcgccatgacgacgcaggagatggtgggcaaggcgggggtgaacccgggcgac
ctcgggcgactggccaatcagctgacacgagactacgatgtgctggccagtaactcagca
aatgccgccgcaacctccaacagtcaggatattgcgaatcgcatccgtacgacggtccaa
gacctgggtaagagctgtgtggagctggtacaggacgccggcaaagtccagggcgaccca
cacgacacatacgcgagacgcgacctccaggaccatgcccgcagcgtcagtgagaaggtg
gcctttgttctagcagcattacagtccgggtctcgcggtacccaggcctgtatcaatgcg
gcaagcgcggtgagcggaatcattgctgatctggacaccaccattatgtttgccaccgcc
ggaactctgtgtactgagggagatgacagtttcgccagccacagagaggacatcctgaaa
acggcgaaggctttggtagaggagaccaagaagttggtacagggcgccgcatccgatcag
gaaacgctcgccggggccgctcaacaggccgtcaaaaccatcaccaaactcgcagatgtc
gtcaaacttggtgcagcctcactcggatctaaccaacctgaggctcaggtgatgataatt
aacgcggtgaaggatgtggcttccgcactctccgatctgatcagcgccaccaagaacgcc
tccggcaaaaacgtctccgatccggcaatgatgaccctcaaagagtctgccaaggtgatg
gtgaccaacgtgacatcgttactgaagacggtgaagaccgtggaggatgaagccgcgcgg
ggaactcgggccctggagtctaccatagaggccataggacaggaggttaagtcgtacgag
gctggaaccttgccagagaagaaagcaacggcagaagatctgatccgactgaccaaacct
atcaccacggcgaccgccaaagcagtggctgctgggaactcgggtcgccaagaggatgtc
atcatctgtgccaacatgggacgcaaggctatctttgatttactggcaacatgcaggggc
acagccagcactgcagagacaacagaagtccgacagaagacgatagcagccggcaagaac
tgtgctgttgtctacaaagatctactggagcaggtcagcacggtggtccagaaaccttcc
caggaggccaagcagacactggcagcacgtgcgcaccaagtcgcggtgtccgtacaggaa
atcgtacactgctctgaactcattaaagtgggccaacccgcagaaggagcgtccaaagag
ataagatggtcccatatcgtgaaaggtacagactgggtggatcccgaggaccccacagtg
atcgccgagagcgaactcctgacggcggccaaatccatcgaagctgccgcacagaaactg
tcgcaactcaaaccacgcaaaaaggcaaaggaagcagacatgagtctaaactttgaagag
caaattctggaggcagccaaatctatcgcctcagcaacggcagccttggtgaagtcagcg
tcggccgcacaaagagaacttgtggcgcaaggaaaggttcgcacgcgcaaagagattgga
gcaacataccacaaatctcagatactggacgatgacggtcaatggtccgaggggcttata
tcagcggccaagatggtagctgctgccactcatagtttgtgcgagtcggccaatgccatg
gttcaaggtcatgctacagaggagcgactcatcgcgtccgccaaggaggtcgcggggtcg
acagcccatctcctggtcgcctgcagggtcaaggccgacccagactcagtcgccatgaaa
cgcctccaggcggcgggtaatgcggtgaagcgtgccacggaggtcctggtgaaggcggcc
cagcaggccaagcagagagatgaggacgaggatataaacgtggcagtcgactcacgtaaa
gtgggcgggatcaaacaggaactacaaattcaagaggagatgttacggaaggagagagaa
tggatcgaagccagagagaagctggccaagttccgtaaacagcggtacaaggacacgggc
cacgatagcgactcatcatccgccttctaa
DBGET
integrated database retrieval system