Magallana gigas (Pacific oyster): 105339971
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Entry
105339971 CDS
T03920
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105339971
Membrane trafficking [BR:
crg04131
]
Protein recycling
Others
EARP complex
105339971
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
DcpS_C
Peptidase_M4_C
Motif
Other DBs
NCBI-GeneID:
105339971
NCBI-ProteinID:
XP_011444074
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All DBs
Position
5:20256962..20280568
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AA seq
956 aa
AA seq
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MDLKNKIKSILKKQDTFVSPTEEVINHDSFTGGPVVTKYKQVKPSNPHEEQEILDGIDKV
YYNTEGIDTSHYELQKLPEVLDLGDIDLDRKRLRKQLQVVSKKVSDLVLQNHPAYARELQ
RVMDLQKTLQYATVICANGRRQLSSARDTFTAASLNMLANYRKRQQLVSIMKSLRTIKTL
QRTDVRLRELMEEEDYCGAIQLCLECQKAASTYKHFTCISELNSKLQDTLVMIEEQIDVA
LSKTCSNFDETHYEKVQTAYRLLGKTQTAMDQLHMHFTSAIHNTAFQIVLGYVELCSGTG
RENFHKRQYTDLCKSVTQESFTPCLIDLSKALWEVMRSYHKTMRWHEEHEEESEETEDGK
AQADFTKHYIKQKLEHGLSRIWQDVQSKVKIYVLGTDLSGFKLEEFIRVLDLVNRMIEIG
EEFCKSKSEGLQDSLKQQSLNYFKNHHRYRMEELRMFLENEGWELCPVKLSFSYVQLLGK
TQLINQEFRFMKSWMKSPNSTLNLSTTEDTSGGGTVMEPSKRRYFVQSATKNPFDEKPDE
DENEDFFAGSLDDEDNGNLSDSDSDVPDELKQDYIDEVTGEGRSNSRQIKRRLSKSKNEK
FIPIVTNTTLNVMRVIGKYMQMMTVLKPIAFDVILCMSQLFDYYFYTVYSFFGADTTTKN
ERSINNRLNIALQRIHNNLIAESPVPGAPPVDQSENLEKMPQAYLSPIVDLHRRDQLFGL
AERVVAVESLIFLAKQLELLQPHLEAMIPTNKKAFLQQFFSQTVNMAEEVRKPVYWSVSA
QAVNYDQVQGQMASVRWDIKDIMSQHNPYVDSILRSFESVAHQLVEINRRVPIPRVVYHT
LWEHCVRLANRTFVEGFSNAKKCSNEGRALMQLDYQQFLMKLDSIMDLKPIPEKEFVEGY
IKAYYLPESQLDSWLQDHKEYSNKQLLALINSVDHINKKSRQRLINIVEEMDRSRR
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggacctaaaaaataagataaagtcaattctaaaaaagcaggatacatttgtatccccc
acggaggaagtgataaaccatgattcattcaccgggggaccagtagttaccaaatataag
caagttaaaccgagtaacccccacgaagagcaagagatattggatggtattgataaagtt
tactacaacaccgagggcattgacaccagtcattatgaattacagaaactcccagaagtc
ttggatttaggtgacattgatttagatagaaagagactcagaaaacaactgcaagtggtt
tcaaaaaaagtgtcggacctggttcttcaaaaccaccctgcgtacgcccgggaactccag
cgggtgatggacctccagaagactttacaatacgccactgttatctgtgccaacggcagg
agacagttgtcatctgccagggatacctttactgcagctagtctgaacatgttggccaat
tataggaagaggcagcagctggttagcattatgaagtcgctgagaaccatcaaaacattg
caaagaacagatgtgagactaagagaactaatggaggaggaagattattgtggggccatt
caactttgtttagagtgccaaaaagctgccagcacctacaaacactttacctgtatcagt
gagttgaactccaaactccaggatacacttgtgatgatagaggaacagattgatgtggca
ttgtccaagacctgcagcaattttgatgagactcactatgagaaagtacagacagcttac
aggctgcttgggaaaactcagacggctatggaccaactccacatgcattttaccagtgcc
atacacaacacagcattccagatagtgctaggatacgtagagctgtgttctggtacagga
cgagaaaatttccacaagagacagtatacagatctatgtaagagtgttacacaagaaagt
tttacaccctgtctgattgacctgagcaaagcattatgggaggtcatgaggagctatcac
aagacaatgcggtggcatgaggagcatgaagaggagtctgaggagacagaagatggtaaa
gctcaagcagactttacaaaacactacatcaaacagaagctggaacacgggctcagtcgg
atctggcaagatgtgcagtcgaaagtcaagatctatgtgctaggaacagatttatccgga
ttcaaactggaggaatttatccgcgtgctagatctagtcaacagaatgatagagattgga
gaggaattctgtaagagcaaatcagaaggtcttcaggattccctaaaacaacagagtctg
aactacttcaaaaaccaccacaggtaccgcatggaggagctgcgtatgtttctggagaac
gagggttgggaactgtgtcctgtcaagctatccttctcctacgtacagctcttggggaaa
acacagctgataaaccaggaattccgatttatgaagtcatggatgaaatcccctaactca
acactgaacttgagcaccaccgaagatacctcaggtggtggcactgtgatggaaccttct
aagcggcgctactttgtgcagagtgccacaaaaaatccattcgatgaaaagcctgatgaa
gatgaaaatgaagatttctttgcaggatcattggatgacgaagataacggtaacctttca
gacagtgattccgatgtacccgacgaattgaaacaagattatattgacgaagtgacggga
gaaggaaggtcaaacagtaggcaaataaagagacgactttcaaagagtaaaaatgagaag
tttattcccattgtcacaaataccaccttgaatgtaatgagggtcataggtaaatacatg
cagatgatgacagtactgaagcccattgcatttgatgtcatactgtgtatgtcccagctg
tttgactactatttctacactgtgtattccttttttggtgctgatacgacgactaaaaat
gagcgctcgatcaacaaccgactcaacatagcactgcagagaatccataacaatctgatc
gccgaatctcccgtacctggggccccacccgtagaccagtccgaaaacctggagaaaatg
cctcaagcctacttgtcaccgattgttgatctccacagaagggaccaactgtttggatta
gcagagcgtgttgttgccgtggaatctctgatattccttgccaagcagctagaactgctc
cagccacatttagaagccatgattcccaccaataaaaaagctttcttacaacaattcttt
tctcagacggtaaatatggcggaagaagtgaggaaacctgtgtactggagcgtgtccgct
caggcggtgaactatgaccaggttcaaggtcaaatggcttctgtgcgatgggacatcaag
gacatcatgtcccagcacaacccttatgtggacagcatactcaggagttttgagtcggtg
gcccaccagttggtggagatcaacaggagagtgcccatcccccgggtcgtctaccacacc
ctgtgggagcactgtgtcaggctggccaacaggacgtttgtggaggggttttcaaatgcc
aaaaagtgcagcaacgagggcagggcattaatgcagcttgactatcagcagtttctaatg
aaattagactctatcatggatctcaagcctattccagagaaggaatttgtagagggttat
ataaaggcctattatctcccagaaagtcagctagattcctggcttcaagatcacaaggaa
tattcaaacaaacagttactggctttgataaactcggttgaccatattaacaagaaatca
agacaaaggcttataaatattgtggaggaaatggaccggagccggcgataa
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