Magallana gigas (Pacific oyster): 105340104
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Entry
105340104 CDS
T03920
Name
(RefSeq) NFX1-type zinc finger-containing protein 1
KO
K27391
NFX1-type zinc finger-containing protein 1
Organism
crg
Magallana gigas (Pacific oyster)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
ZNFX1
AAA_19
zf-CHCC_shd
AAA_30
AAA_5
nSTAND3
AAA_16
AAA_18
SLFN-g3_helicase
PhoH
zf-CHCC_ins
AAA
ResIII
DEAD
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
105340104
NCBI-ProteinID:
XP_011444261
LinkDB
All DBs
Position
6:8586200..8598954
Genome browser
AA seq
2307 aa
AA seq
DB search
MEREEYRVPPLRTEELKRLSIFEVREILESSLWTNEKIRATVRSTSQNLEELKYFFQIIM
KVLQNKRHSEDPNVITLIPILASSNFEKNLHYLLQCGGRESVLPSIKSVVFFLQELCKRS
PSNGNGFLELAVETDKKITDIIGDGDEDVDGLLDLKDDLEEINQIIVYRLAISEVKIEKQ
KKDTRKPPNNFRNIPILPTLDDLQTKPFFRPNLRDTPFENLDDYLDIQFRLLREDCISQL
RNGIFEYIHTKYVERSEARRIQDVRLYKHVTIEEGREMTLDGPMYTIKLDMNQVKRTRWE
GGKRMLYGSLLCLLPDSYRRLYFGIIAESDTDTIKKDGRLKIIVKRQKGDPELTKGLKLT
LIESVAYFEAYRHVLHCLQNIKEGELPFERYIVYCQKNIEKPLYLKREEGVKYDLQPIVS
CSTIFKAPKNNKSLRHAGFKMGQVDRQYQEKRLEVSILDRRWPRPSDLHLDLSQYEAFKS
ALTKEFVLIQGPPGTGKTHLGLRIAKALLHNSNYWRGVKMSEENLKQKRKDQQEEQQLHP
MLIVCYTNHALDQFLEGMIDFMDPANCAEWKQSVVRVGGRSNSEKIEDFTLKKRRREFRK
KYIDHGRFQKELEQKVKEMCKHKSLIESARKNIIDETVLKSFVNEVNILSRIELPKPFKI
MEWLKVTEKDLIEAAFEKYEETEETADTSFYESLTETEELIDVETESDNAKHERMIEEDE
FEMDFTFNDIGVSVETVLNEAKSDPNFTEEFIKHLDKEGLIVNDFFLKSKPMSNEDVNKR
IRNVWNLSMPDRWRMYKYFEMKFCDIHSQKIAEIRAKYDAQYKDYLIEKNYVDKEILRSS
MVIAMTTTGAARYQIVLNEIGPKIIIVEEAAEVLEAHIISTLSNKCEHLILIGDHKQLEP
KPSVYELAEKYNLALSMFERMIENGLEFNCLMRQHRMRPEISNLVQDMYPGLENSDSVFN
REHVMGIEKDVFFISHSHAEDQKGESQSSLNEFEAKYVMRLTRYLIQQGYKRQDITVLTP
YAGQMFCIRDLMPKSEFLGIRISILDNYQGEENKIIILSLVRSNKEGRLGFLKKENRICV
ALSRAKIGLYVIGNFQMFEKNTRSSHLLRTAINKMKTTDSLCDGLPIYCQNHPSTQKTLA
KSPDDFDKAPEGGCTLLCNFELECGHTCTRLCHPYDKEHLDIRCTFNCEKKCERGHICNK
ICHYPKHCRCRVKVKKVLDCYHTAEMACYQEPSTYKCLEVVRRTLQCGHEATMQCWIPEE
QYECQIIVRRNLTCGHSEDLECHIDYERYNCMELVKRTLSKCNHEVEMKCFENENIFNCP
VEVTEKRKDCEHSFTRKCYISSILFQVQNKCCEMVKKTLPCKHFVDVECNVSIKGIKCQH
LVTTNFPCHHDNVMVKCRKKDSTKCSSKCGLICSMGHECSKPCHFPEKCHCDIIVEKTHP
ICGHVIKVKCSENIENTKCFNKVIKTLSCGHKKTTLCHIDISQVKCKELVFKMLTCGHEK
EVMCHKDVSDSDIQCQENILKSLNCGHRKMMHCFVDPLSVKCNEMTEKMLPCSHQQETEC
WRKVDEIKCNTNVEKNLPCGHSAFALCFKSPKDIKCEENVLKQLPNCCHTMWMKCYVSPN
KIKCKQQVEFIQPTCNHINQIACHVNRSLQENVKMKPPQCTSTISRIELCGHEVFNPCTN
PSKNTCRKKCTVQLACGHSCTGDCQKCKGGLFHQICSENCTLNCVCGHKCTGKHCGNCKP
CEDKCMSMCSHITCENVCSRPCILCEKPCDWSCPHFSCELPCYEPCKRPRCNKKCPKILP
CGHKCAGLCGEPCLKTCLQCKSDDESKHIIKTGLVQLSACEHIFPAYELDAAIEAQKISI
LHALRCPSCHSIISYHPRYNEILKKRANLLNMIKIQIQRQNSPVVTFPMVFGDGKECRRY
LTEFGTFLSATKRKLEKMNENDLRREQFYLEIIQNRLSSDEIQSYQTVIDIYGSIEVLSW
KWKTLILKLAKNDIIEGLTASETPSETSIEDVHISKTDNIQTPADIEERFCLLGQLDNVP
IDIFITKQYEIKSFISEFKPLLSSQVNTRIEKADNFPKPSGYMDCHIDRWSVCENGHPFY
DYDQKQACYICHHVEFKHPFAPRPKPSHDTNQKGARPKQFKQDQNKKSVSKMDTTGSSYS
KETRKKSELVSRYEGYELNIAKSVSPQEHWEHEGWSDMYPEQTRLPPNRSVTDDFESMIR
DITKIDTQKSHNTSRGSEPGTRGKGRNKRFNHKTNPLSTTTLPREDLSDSNIENNPTSGR
GRGGRGRGNQGNRGNRGNRRRGGQRKK
NT seq
6924 nt
NT seq
+upstream
nt +downstream
nt
atggagagggaagaatatagggtaccacctcttcgaactgaagaattaaaacgtttgtca
atatttgaagttcgcgagattttggaatcatcgttgtggacaaatgaaaaaattcgagcc
acggtgcggtcaacaagccaaaacctagaagagttgaagtatttctttcaaattattatg
aaagttctgcaaaacaaaagacattccgaagatccaaacgttattactctgattcctatt
ttggcatcttcaaattttgagaaaaatcttcattacttattgcaatgtggaggacgtgaa
agcgttttaccttccattaaaagcgttgtatttttcttgcaagaattatgtaaaaggtcg
ccttcgaatggtaacgggtttcttgaactagcagtagaaacggataaaaagataactgat
attattggtgatggggacgaggatgttgatggtcttttagatctgaaggacgaccttgaa
gagatcaatcagataattgtttatagactagcaatttctgaagttaagattgaaaagcag
aaaaaagacacaagaaaacccccgaataattttcgaaacattcccattttaccaacgtta
gatgatttacaaaccaagccattttttaggccgaatcttcgcgacacaccctttgaaaat
cttgatgattatcttgatatacagtttcgtttgcttcgagaagattgtatatcccagctg
cgaaatggaatatttgaatatattcatacgaagtatgtagaacgaagcgaagctagaaga
atacaggatgtgaggttatacaaacacgttacaattgaggaaggcagagaaatgacctta
gatggtccaatgtatacaataaagttagatatgaatcaggtgaaaagaacgagatgggag
ggtggcaagagaatgctttacggttcgttactctgcctcttaccagatagttatcgcagg
ctctattttggaataattgctgaatcagatactgatacaattaagaaggacggtaggttg
aagatcatagtcaaaagacagaaaggcgacccagaattgacgaagggcttaaagttaacg
ttgatagaaagcgttgcttattttgaagcatatcgacatgtattgcactgtctacagaac
atcaaagagggagagttaccttttgaaagatacattgtgtattgccaaaaaaatatcgaa
aaaccattgtacttgaaacgtgaggagggagtcaaatacgatttgcagcctattgtgtca
tgttctacaatatttaaagcaccaaaaaataacaaaagtctaagacatgctggatttaag
atgggacaagtagatcgtcaatatcaagaaaaacgacttgaagtttccatattagataga
agatggccaagaccatctgatcttcaccttgacctatcacaatatgaagcattcaaatct
gccctgacaaaagaatttgtgctcatacaaggcccacctggtacggggaaaacacatctt
ggacttcgaatagcgaaggcgttgcttcataattcaaactattggagaggtgtgaagatg
tctgaggaaaatttaaaacaaaaaagaaaagatcaacaggaagaacagcaacttcatcca
atgttaatagtttgttatacaaaccatgcccttgatcagtttctagaaggtatgatcgac
tttatggatcctgcaaattgtgctgaatggaaacaatcagtcgtgcgtgtaggtggaaga
agtaacagtgaaaaaatagaagatttcacgctcaaaaaaagaaggagagaatttagaaag
aagtatattgatcatggtcgatttcaaaaagaacttgaacaaaaagtcaaagaaatgtgc
aaacataagtctttgattgaaagcgcaagaaaaaatatcatagatgaaaccgtcctgaaa
tcttttgtgaatgaagtaaacattctttcccgaatagaattgcctaaaccgtttaaaatt
atggaatggttgaaagttacagagaaggatttgattgaagcagcttttgaaaaatatgaa
gagaccgaagaaactgctgatacctccttttatgaaagtttaacagaaactgaggaactt
attgatgttgaaaccgaaagcgacaacgcaaaacatgaaagaatgatagaggaagacgag
tttgaaatggacttcacttttaatgacattggagtaagtgttgaaacagtattgaatgag
gcaaagtctgatcctaattttactgaagagtttataaaacatcttgacaaggagggttta
attgttaatgatttttttctcaaaagtaagccaatgtcaaatgaggatgtgaataaaaga
attagaaacgtatggaatttatcaatgccagatagatggaggatgtacaaatattttgag
atgaagttttgtgatatccattcacagaaaattgctgaaattagagcaaaatatgatgca
caatacaaagactatttgatcgaaaaaaattacgtagataaagaaattttgcgaagctct
atggtaatagcaatgacaacaacaggagcggccagatatcagatagttctcaatgaaatc
ggaccaaagatcatcattgtagaagaagctgcagaagtgttggaggctcacattatatct
actttaagtaataaatgtgaacatttgatattgattggagatcataaacaattggaacca
aagccttcagtatacgaacttgctgagaaatacaacttagcattatccatgtttgaaaga
atgattgagaatggacttgaatttaattgtttgatgcgccagcacagaatgcgtccagaa
atttcaaaccttgtgcaggatatgtatcctgggctagaaaacagtgatagtgtttttaac
cgcgaacatgtgatgggcatagaaaaagatgttttctttatctcgcattctcatgcagaa
gatcaaaaaggggaatcacagagctctttaaacgagtttgaggcaaaatatgtaatgaga
ctaacacgatatttaatacaacagggctataaacgacaagatatcactgttttaacccct
tatgctggacaaatgttttgcatacgagacctgatgccaaaatcagagtttttaggtata
agaatatcaatcttagacaactatcagggggaggaaaataaaataatcatactctctttg
gtaagaagtaataaagaaggaagacttggatttttaaagaaggaaaatagaatctgtgtc
gcgttgtcaagagcaaagatcggtttatacgtaatagggaattttcagatgttcgaaaaa
aacacacgcagttcccacttgcttcgaacggctatcaataaaatgaagactacagattct
ctctgcgacggattacctatttattgccaaaatcatccttctactcagaaaacattagca
aaatctccagatgattttgacaaggcacctgaaggaggatgtaccttactttgcaacttt
gagttagaatgtggacacacctgtacacgtctatgtcatccttatgataaagaacatcta
gatatacgttgtacattcaactgtgaaaaaaagtgtgaaagaggtcatatatgcaacaaa
atctgtcactatccaaaacattgccggtgtagagttaaggtaaagaaagtgttggattgc
tatcatacagctgaaatggcctgttatcaagagccttcaacatataaatgccttgaggtg
gtcaggaggactttacagtgtggtcatgaagcaactatgcaatgctggataccggaggaa
caatacgaatgtcaaattattgttcgtagaaatttgacttgtggacactccgaagacttg
gagtgtcatattgattatgagcgatataactgcatggaattggtgaaaagaactctttcg
aaatgcaatcatgaagttgaaatgaagtgctttgaaaatgaaaacatattcaattgtcca
gttgaagtcactgagaaaagaaaagattgtgaacatagcttcacccgtaaatgttacatc
tcaagcatcttatttcaagtacaaaataaatgttgtgaaatggtcaagaaaactctacca
tgtaaacattttgttgacgtcgaatgtaacgtatccataaagggaatcaaatgtcaacat
cttgtaactacgaactttccatgtcaccatgacaatgttatggtcaaatgcaggaaaaaa
gactcaacaaaatgctcttctaaatgtggtttgatttgttctatgggtcacgagtgttca
aaaccatgccatttccctgagaaatgtcattgtgatatcatagtagagaaaacacaccct
atatgtgggcatgtaataaaggttaaatgctctgaaaatattgaaaacacgaaatgcttc
aataaagtcataaagactctatcttgtggacacaaaaagacgactctctgtcatatagac
atttctcaggtaaaatgtaaagagctagtgtttaaaatgttgacctgtggtcatgaaaaa
gaagtgatgtgccacaaagatgtaagcgacagtgatattcagtgccaagaaaacattctc
aaaagcttaaactgtggtcatcgcaaaatgatgcattgctttgttgacccgctgagtgtt
aaatgtaatgaaatgacagagaagatgttgccatgttctcatcagcaagaaacagaatgt
tggagaaaggttgatgaaatcaaatgcaatactaatgttgaaaaaaacttaccatgtggg
cacagtgcttttgcattgtgtttcaagtcgccgaaggatataaaatgtgaagaaaatgtg
ttaaaacagctaccaaactgttgccacaccatgtggatgaaatgttatgtatctccaaat
aagataaagtgcaaacagcaagttgaattcatacaaccaacatgtaatcatataaatcaa
attgcttgccatgtgaacagatcacttcaagaaaatgtaaagatgaagccaccacaatgt
acatcaaccatttctcggattgaattatgtggccacgaagtgttcaacccttgcactaat
ccctcgaaaaacacatgccgcaaaaaatgcacagttcaattagcatgtggacacagctgt
acaggcgattgtcagaaatgtaaaggcgggttatttcatcaaatttgctcggaaaattgc
acattaaattgtgtttgtgggcataaatgtactggtaaacattgcggaaattgtaaacca
tgtgaagataaatgcatgtccatgtgctctcacattacttgtgaaaatgtatgcagtaga
ccgtgcattctatgcgaaaaaccctgtgactggtcttgtcctcatttttcttgtgaactg
ccttgctatgagccttgtaaacgaccaaggtgcaacaaaaaatgccccaaaatcctccca
tgtggtcataaatgtgctggtttgtgtggcgaaccttgcttaaaaacctgtttacaatgt
aaaagtgatgatgagtctaaacatatcatcaagacaggactggtacaactcagtgcatgc
gaacacatatttccagcatatgaattagacgctgctattgaagcacagaaaatcagtatt
ttgcatgcgttgaggtgtccttcttgtcattcaataatatcgtatcatccacgatataat
gaaattttaaagaaaagagcaaatcttttaaacatgataaaaatccaaattcaacgacaa
aacagtcctgtggtcacatttccaatggtcttcggcgatggcaaggaatgtcgccggtat
ctgactgaatttggaacatttttatcagcaacaaaacgaaaactggaaaaaatgaatgaa
aacgatcttagacgtgaacaattttacctagaaataattcagaatcggttatcctctgac
gaaatacagagctatcaaacggtcatcgacatatacggtagcattgaagttttaagttgg
aaatggaaaaccttgattttaaagctggctaaaaatgacattattgaaggtcttactgca
agtgagacccccagcgaaacaagtattgaagatgtacatatttctaaaactgataatata
caaacaccagcagacattgaagagagattttgtttactaggacaacttgacaacgtaccc
atagatattttcattacaaaacagtacgaaataaaatccttcatatcagagttcaaaccg
ttgctgtcatcacaagtaaacacaagaatagagaaggctgataattttccaaaaccttca
ggatatatggactgccatattgacagatggtccgtgtgtgaaaacggtcaccccttttat
gattatgatcaaaagcaggcatgttatatttgtcatcatgtggaatttaaacaccccttt
gccccaagaccaaaaccatctcatgataccaatcagaaaggtgctcgtcctaagcagttt
aaacaggaccagaacaagaaaagcgtgtcaaaaatggataccactggttcaagttattct
aaggaaacgcggaaaaaatctgagctagtgagtcgctatgaaggatatgaattgaacatt
gccaaaagcgtgagccctcaagaacactgggaacatgaaggatggagtgatatgtatcca
gagcaaacaagattgccgccaaatcggtcggtcacagacgactttgaatctatgattcgg
gatataactaagattgatacacaaaaatcccacaatacctcaagaggaagcgaaccaggc
accaggggtaaaggacgaaataaacgatttaatcataaaacaaacccattgtctactacg
acattaccccgtgaagatttgagtgactccaacattgaaaataatccgacctcagggcga
ggaagaggtggaagagggaggggtaatcagggtaatcggggcaaccgaggcaacaggaga
cgaggcggacagcgaaaaaagtag
DBGET
integrated database retrieval system
