Magallana gigas (Pacific oyster): 105340178
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Entry
105340178 CDS
T03920
Name
(RefSeq) germinal-center associated nuclear protein isoform X3
KO
K24317
germinal-center associated nuclear protein [EC:
2.3.1.48
]
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crg03019
]
105340178
03036 Chromosome and associated proteins [BR:
crg03036
]
105340178
Enzymes [BR:
crg01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
105340178
Messenger RNA biogenesis [BR:
crg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
105340178
Chromosome and associated proteins [BR:
crg03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
105340178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAC3_GANP
MCM3AP_GANP
RRM_1
CSN8_PSD8_EIF3K
CID_GANP
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
105340178
NCBI-ProteinID:
XP_011444408
UniProt:
A0A8W8LZB7
LinkDB
All DBs
Position
4:16525773..16548546
Genome browser
AA seq
2104 aa
AA seq
DB search
MSNPFGSSSSPFGSSFGAQTSNQSQQVFGGTSSLASPFGQSSGTTFGSPGNPSLGSGSAV
FGAPTGSNAFGSVSSAFGSTDSSRSFGAGSTSSGFGMSSGGFGGSITGTGFQSGAGGFGG
SSAFGTTTVNTGFGTSNAGSGSGGFGGGFSGSTPSGGFGTSGFGQGSSVLSSSGGFGTTF
SMPTTAGAFGSGSVSSVSSNLPAFGKSVGFGSTTQTGGSFGTTLSTSSSGFGANGGFGPS
TGGASSFGTGATFGATNKQGSKCIQMSSSGNAVNSLHSQPTPAFFGQGNVFSSSTAGSGA
VSSVSASAKTAFGTSTSIGYGNSTTPGFSAFGAVTGTGNAPFGGMPLAPSGILSGGPPKE
RGSFGGPTQSTSSEFKSLTQADEVGQKFGAKGSTGSSSGLFGKGSQMFGKLESSSASNEG
GASRMGGQTGFGQDELNQGSKDNGTGEIVGLVPPASKFILRTSASKAIQSTAGNDSCETS
TTKSKKTLFHEEAYSGQRPGASQVLFGKAIAGSQNRVWKRTTDGEEARKIKRKSSDGTEE
ENQAKRTTTMRRHSVADDKDRVALICKNVPPRFNNSQKLRQHFSKFGEVARVFPKPERGM
ATIHFKTHESALEAKKKGAVIMKGEKRMELFWSSYSPAGKVQARKSSAEDATGQTAGPIK
RQAQDTTRQYKWRRNEVDDELASMSGTGDLSQPQQEVKVQPSQSTDRGARHSSPVPSTSG
SSVAMVTKVDQASITTLKNATARSNSDKLHILNLRDKVNRHGSKKQADLATAKAFVGSCT
DMCPEKERYDREEKRRLHNYEVLQGTEGTGNPQVNHFLAVKEYSRSSADQEEPLPYELRT
LPTLTLTMTYLLSKIADRGEDGKWGDWFDFLWNRTRGIRKEITQQQFCNTESTALLEKCV
RFHIFCAERLCEEDMHSFDDKINNENMTKCLQTLKENYSDLEKKQEFCPNEAEMRCYMVL
MNLNQGDILRETQQLRPDVRNTIYINYALQVYAALNSNNYVRFFRLVKGGSFLCACIMHR
YFTQVRKKALQILIKAYRKGVQLPLEDLVRTLGFDDQNEAAQFCQFFGLTTVDNCVTLDR
GAFIDPEENWCPRRSALIEQKRNTSIGEAINGGPLPVFSPPKPENSFDENGRFIGQIIVK
AADLVDSPRKEPKSIRPETDHAPVSTARVVTPQPPAESKPKVTFSLEGVKEEAKLLFWEV
IDGLCLEIGQEVKRDVVDPLMDLSLSVYDSVSTEVVTKFVLEIADAVKTLQEQQKAEREA
QARNAAAVQITSEILKEVLNEETLNSATEEFREVQAELKRQRIERCSAEVAMAILNTSVL
DMTHSLSEEFYQKDVVERLQRLADQEHCVKVKRAGRFFQMWKAQHSARVKFKRSMLDFPS
SSAMMDPAQQVEALIPDGRREEIQEEGFYVTQTTKLSLESPVEYVKRLEAEEKVLTAHEI
YRNLCRQKAWKPLDVGSLVGHQLLLQNKEAIKRDPSCGNIFWKLVISLPDPDLIQTQHQG
QGLQQLTKWLKAKFHRGMTTSQHLSSVQNELLSLYKVPVTLNSLQVSLGVCVRLLEGNIA
ISDITGSLQGASALFFVLPPAISEDPEWSLWEDEKRRLEGLLRSKPISPPLPLVVICPVP
ANENVDENFVQRCLNIDDLVAEKLISCMSLYVIEYDEDLPEGVEVNDPEVTEKLSDRVRW
LAEQFPGTPGLQTQYCRSVVEDFLQEHFYSRVLYNLKQRKLQGYLHQDPNTMISLYNAGI
VHLQQVLTSPKLSDHSWPVSEFTHSRRHDLPPLYWNTDQHLTMVSDLLADLQLPSFTYSQ
EEKDDWSTVCQDVWAYVQRIVDGFSPSNSVDFASKIRVLLHRTRRDFEDTCDLCTGVSRC
DPTYINMPWTDLIMACVEFKITEADFMDPNSETGMDELVLAYDKEALLAFDPPSEWRYLE
NDQDREETVSLETTFQRAAARKCSQKESLSNSRQKNAVVRTKEKLASLDPLPKAVHDATR
TSTLLSTTIEEEKLKSKQFEKYLESLVNGSDLNKTNIPDISHIPTWSVYEYEQEESKISQ
NTIQESFYKTEASVWNYGPYNLDKTLGQPRVSEQFVQLEENLKSERRASDVFELQLQRWM
QTGV
NT seq
6315 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatccatttgggagctcctcatccccatttgggtcatcatttggtgcacaaacg
tcaaaccagtcccagcaggtattcggtgggacatcatcacttgcttctccctttggtcaa
agctctgggacaacctttggaagtcctgggaatccatcattaggatcaggatcagcagtg
tttggagcaccaacaggatcaaatgcttttgggtctgtttcatctgcatttggatctact
gatagcagtagaagctttggagctggatcaacaagcagtggttttgggatgtcatctgga
gggtttggaggaagtatcacagggactggattccagtctggagctgggggttttggtgga
agttctgcctttggaacaactacggtaaatactggatttggaacaagcaatgctggatca
ggtagtggtgggtttggaggtggattttctggatcaactccaagtggtggatttggaaca
agtggatttggacaaggatcctcagtgctatcatcaagtggaggctttgggacaaccttt
tccatgccaacaacagctggagcttttggatctggctctgtttcaagtgtatctagtaat
ctgcctgcttttgggaagtcggtaggatttggttctacaactcaaactgggggtagcttt
ggaacaacactcagcacttcctcatctggatttggagcaaatggaggctttggtccatca
acaggtggtgcatcatcatttgggacaggtgcaacatttggagccacaaataagcaaggc
agtaaatgtatacagatgtcttcatcaggaaatgctgtgaactccctacactcccaaccc
actcctgcattctttggacaaggcaatgtgttttcatcatcaacagctggaagtggtgca
gtcagctctgtttcagctagtgccaaaactgcatttggaacatccacatccattgggtat
ggaaactcaacaactccaggattttctgcctttggggctgttacaggaacaggaaatgcc
ccttttggcggaatgccgttagcacccagtggaatattaagtggaggtcctcccaaagaa
agaggatcatttggtggacctacccaatcaacatcctcagagtttaaatctttaacacag
gcggatgaagttggccagaagtttggggcgaaagggtctaccggtagtagttctggtctg
tttggaaaaggctcccaaatgtttggtaaactggagtcctcgagtgcatcaaatgaagga
ggggcatccagaatgggtgggcaaacaggatttggtcaagatgagctgaaccagggatca
aaggataacggaacaggggagatagtgggattggttcctccagcctccaagttcatactg
agaacttctgcttccaaagcaatacagtccacagctggtaatgacagttgtgaaacatca
accacaaaatctaagaagacgttgttccatgaggaagcttactcagggcagagaccaggt
gcttcgcaggtcttatttggcaaggccatcgctggctcacagaacagggtctggaaacgg
accacagatggagaggaggcccgcaaaataaaacgcaagtccagcgacggaacagaggaa
gaaaaccaagcaaaaaggaccaccacgatgaggagacattcagtggcagatgacaaagac
agggtcgccttgatctgtaagaatgtcccgcctcgattcaacaacagccagaagcttcga
cagcatttcagtaaatttggggaggtcgccagagttttcccaaaaccagagagaggaatg
gctaccattcatttcaaaacccatgagtcagctttagaagccaaaaaaaaaggagcagtt
atcatgaaaggagagaagagaatggagctattttggagctcttactcaccagcagggaaa
gtccaggcaagaaaatcctcagcagaagatgctacgggtcaaactgctggaccaatcaaa
agacaggcccaagatacaacacgacagtacaaatggagaagaaatgaggtggatgatgaa
ctagccagcatgtcaggcactggtgacctcagtcagccccagcaggaggtcaaagttcaa
ccgtcacagtccactgaccgaggagcacgtcactccagccctgtgcccagcacatcaggg
tcaagcgtagccatggtaacaaaagtagatcaagcttccattactactctgaagaacgcc
actgctagaagtaattcagataaactgcatatcctcaatctacgggacaaagttaacagg
catggttctaaaaagcaggcagacttagccacggccaaagcctttgtagggagctgtacg
gacatgtgtcccgagaaagagcgttatgaccgagaggagaaacgaaggcttcataactac
gaagtccttcagggcactgaggggactggcaatccacaagttaaccatttcttggcagtg
aaggagtatagtcgatcatcagcggatcaggaggaacccctgccgtatgaactgaggact
ctccccaccctcaccttaacgatgacctacttactgagcaagatcgctgaccgtggggag
gacggaaaatggggtgattggttcgatttcttgtggaataggactcgaggcattcggaag
gagatcacccagcaacagttttgtaatacagagagcacagctctgctggaaaagtgtgtc
cgcttccacatcttctgtgcggagcgactctgtgaagaggatatgcattcgtttgacgat
aaaatcaacaacgagaacatgacaaagtgcctacagacgctgaaggagaactactcggac
ctggagaagaagcaggagttctgtcccaatgaggcagagatgaggtgttacatggtctta
atgaatctcaaccaaggagatatcctaagagagacacagcagctacgaccagacgtacga
aacacgatctacattaattacgcgctacaggtgtacgcggccctgaacagtaacaactat
gttcgctttttccgactggtcaagggcggatctttcctgtgtgcctgtatcatgcacaga
tactttactcaagtcagaaagaaagcattacagatcctgataaaggcttatagaaaaggt
gtacagcttccactggaagacttggtcaggacactgggatttgatgatcagaatgaggct
gcccaattctgtcaattctttggactgaccacagtggataattgcgtcactctggacagg
ggggcattcatcgacccagaagaaaactggtgcccacgtagatcagcccttattgagcag
aaacgaaatacttcaattggggaggctataaatgggggtccactgcctgtgttttcacca
ccaaaaccagaaaatagctttgatgagaatggcaggtttattggccagattatagttaaa
gctgcagatctagtggattctccaaggaaagaaccaaaaagtatcagaccagaaactgac
cacgcacctgtttccactgcaagagtggtgaccccccaacccccagctgaaagcaaaccc
aaagtcactttctcattagagggagtcaaggaggaggcgaagctattattctgggaggtg
atcgatggcctttgtctggagattggacaggaagtgaagcgtgacgtggtggacccatta
atggacctctccctgtctgtgtacgattctgtctcaacagaagttgtcaccaagtttgtg
ttggagattgcagatgcagtgaaaaccctacaggagcagcaaaaggcagagagggaagcc
caagcacgcaacgctgcagcagttcagataaccagtgagattctcaaggaggtcctgaat
gaggaaacactcaactcagccaccgaagagttcagggaagttcaagctgaattgaagaga
caaagaattgaaaggtgttctgcagaagttgcaatggcaatattaaatacctctgtactg
gacatgacccactctctctctgaagaattttaccaaaaagatgtggtagagcgactgcag
cgattggccgaccaggaacattgtgtcaaggtcaagagagcgggccgctttttccagatg
tggaaagctcagcactctgctcgcgtcaagttcaagcgctccatgctggattttccttca
tccagtgccatgatggacccagcacagcaggtagaggctctgattccagacgggaggaga
gaggagattcaggaagaagggttctatgtgacccagaccaccaaactgtccctggagtcg
ccagtggagtatgtgaagcgattggaagccgaggaaaaagtgctaacggcacacgagatc
tacagaaatctgtgtcggcaaaaagcttggaaacctttggatgttgggtcgctagttggg
catcaacttttgcttcaaaacaaagaggctattaaaagagatccaagctgtggtaacatt
ttctggaagctggtgatttctctacctgaccctgaccttatccagacccagcaccaaggt
caaggtctccagcagctcaccaagtggctcaaggccaagttccaccgagggatgaccacg
tctcaacacctctcctctgtacagaatgagttgttaagtttgtacaaagtgccagtcacc
ctaaactctctacaagtctctctgggggtttgtgtgaggctcctagagggaaatatagct
atcagtgacattacaggcagcctgcagggggcctcagctctcttctttgtcctgcctcca
gcaatcagtgaggacccagagtggagtctgtgggaagatgagaaaaggagacttgaagga
ctcttaagaagcaagcctatctctcctccgctaccattggttgtgatatgccctgttcca
gccaatgagaatgtagatgagaactttgtgcagagatgtctgaacattgatgatttggtg
gccgagaagctgatcagttgcatgtcattgtatgttatagagtatgatgaagatttacca
gagggtgtggaggtcaatgacccagaggttacagaaaagctttcagacagagtgagatgg
ttggcggaacagttccctgggaccccgggtctccagactcagtactgtaggtctgtggtg
gaagacttcctacaggaacacttctacagcagagtgttgtataacctcaaacagcgcaaa
cttcagggttacctgcaccaggatccaaacacaatgatatctctatacaatgctggcatt
gtccatttacaacaagtgctcacgtcgccaaagctgtccgatcactcctggccagtcagt
gaatttactcattcaagaagacatgatttgcctcccctgtactggaacactgaccaacac
ttgacaatggtctctgaccttctggccgaccttcagctccccagctttacgtacagtcag
gaggagaaagatgattggtcgacagtttgtcaggatgtctgggcatatgtacagcgcatc
gtcgacggattctcaccttccaattctgtggattttgcatcaaaaattcgagttcttcta
catcgaactcgtcgggattttgaggacacctgtgacctttgtaccggagtcagtcgctgt
gacccaacctacatcaacatgccatggactgacctcattatggcctgtgtagagtttaag
attactgaagctgacttcatggaccctaactcagagacagggatggatgagttggtgctg
gcgtatgacaaggaggccctcttggcctttgatcctccttcagagtggcgctatctggaa
aatgaccaggatagagaagaaactgtgtctttggaaacaacatttcagagagctgcagca
agaaagtgttcacagaaagaaagcctctcaaatagcagacaaaagaatgcagttgtcaga
actaaagaaaagttggcatctttggacccgctaccaaaggcagtgcatgatgctactcgg
acatctactctcctgtcaacaaccattgaagaagaaaaacttaaatctaaacaattcgag
aaataccttgagagtttagtgaacggttcagacttgaataaaacaaacatcccggacatc
tcacatattcctacgtggagtgtgtacgagtatgaacaggaagagagtaagatttcccag
aataccattcaggaatcgttctataagacagaggccagtgtttggaactatggaccttat
aatctggacaagacgctgggccagcctcgggtctctgaacagtttgtccagctagaggag
aatctaaagtcagagaggagggccagtgatgtgtttgagttacaactccagaggtggatg
cagacgggcgtctga
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integrated database retrieval system
