Magallana gigas (Pacific oyster): 105340241
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Entry
105340241 CDS
T03920
Name
(RefSeq) ubiquitin-like modifier-activating enzyme ATG7
KO
K08337
ubiquitin-like modifier-activating enzyme ATG7
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04136
Autophagy - other
crg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105340241
04136 Autophagy - other
105340241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105340241
04121 Ubiquitin system [BR:
crg04121
]
105340241
03029 Mitochondrial biogenesis [BR:
crg03029
]
105340241
Membrane trafficking [BR:
crg04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
105340241
Atg8 conjugation proteins
105340241
Ubiquitin system [BR:
crg04121
]
Ubiquitin-activating enzymes (E1)
UBL-activating enzymes
105340241
Mitochondrial biogenesis [BR:
crg03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
105340241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG7_N
ThiF
Shikimate_DH
Motif
Other DBs
NCBI-GeneID:
105340241
NCBI-ProteinID:
XP_034305768
LinkDB
All DBs
Position
4:3630384..3643655
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AA seq
699 aa
AA seq
DB search
MFKMSAPLVNKMERKQLQFVAFNSFLDAGFWHKLSENKLDVYGLDESKKEIKGFYFNGDP
VGMPCRMNVEFSAFDQNDKTPQRCLPMLGELHNTNTVDKFKECDKKEMISEAGKKIWDSI
VSGKALDTPELLATFLLLTFADLKKYHYYYWFCFPCLCPSTDITFDQEPKKLKDKLTAEE
MEQFLQAYDTFQDAHPTYQGFFVAVLSKGNIVIEDVKHMNKFENTQEVYFGFCDPSNIED
YPGWPLRNFLMLISYHWKGDLRGVNVLCLRDRSRDGTRDISHSLLLSLCVPDIKNVPECP
KCVGWEKNEKQKLAPRFVNLSASMDPTRLAASAVDLNLKLMRWRLLPELDLDLISRTKCL
LLGAGTLGCNVARCLMGWGVRTITLVDNGRVSYSNPVRQSLFQFEDCVKGGMPKAEAAAE
AMKKIFPGVNAKGLSLSIPMPGHAVPESAIDGVKKDVETLQDLVNSHDAVFLLLDTRESR
WLPTLMAAEKQKIVICSALGFDTYLVMRHGVRSDTEGADPAPLSSYSSIPGDQLGCYFCN
DVVAPGNSLKDRTLDQQCTVSRPGISYMASALAVELLVSVLQHPELGKAPADTSASDEHL
SKDFVCPLGLVPHQIRCFVSRFQQVLPACKAFDKCTACSKTVIEQFRRDGFDFLRRAFND
PSYLEDLTGLTQMHQETLDAEVWGFSDDEECSSMEVSSS
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaaatgtctgcgccccttgtaaacaaaatggaacgtaaacaactgcagtttgtg
gcattcaatagttttttagacgcaggattttggcataaactttccgaaaataaacttgat
gtgtatggtttagatgaaagcaaaaaggagatcaaaggattttacttcaatggggaccct
gttggaatgccatgcagaatgaatgttgagttttctgcatttgaccaaaatgacaaaacc
ccacagcgatgcctgcccatgctgggagagttacataacaccaacacagtggacaaattc
aaggagtgtgataagaaagagatgatcagtgaagctgggaaaaagatatgggactccatt
gtaagtggtaaagcgctggacacccctgaacttctggctactttccttcttttgaccttt
gcagacttaaagaagtaccattactattactggttctgttttccctgtctctgtccatca
actgacatcacctttgaccaagaaccaaagaaactcaaggacaagttgactgcagaggag
atggaacagtttctacaagcttatgacacattccaagatgctcatccaacatatcagggt
ttctttgttgctgtcctttctaaagggaacattgtaatcgaggatgtaaagcatatgaac
aagtttgaaaatactcaggaggtgtactttggattctgtgatcccagtaatattgaggac
tatccaggctggcctcttaggaatttcctgatgttgatatcctatcattggaagggagac
ctgcgaggtgtaaatgtactgtgtttgcgagataggagtcgagacgggacacgagatata
tcacacagtcttctgctgtccctttgtgtcccggatattaagaatgtgccagaatgtcca
aagtgtgtaggttgggagaaaaatgaaaaacaaaagctggctccaagatttgttaatctc
agtgctagcatggaccccacaagactggcagcctcagctgttgacctcaatctaaagctg
atgagatggaggctgctcccagagcttgaccttgaccttatatcaaggacaaaatgtctg
ctgctaggagccgggactcttggatgtaatgtggcaaggtgcctgatgggctggggagtc
agaaccataactctggtggacaatggtcgcgtgtcttactctaacccggtacgccagtcc
ttgtttcagtttgaagactgtgtaaagggaggtatgccaaaagcggaggctgctgcagag
gccatgaagaagatattccctggagtgaatgcaaaaggtttgagtttatccattcctatg
cctggccatgcagtacctgagagtgcaatagatggtgtgaagaaagacgttgaaaccctc
caggatctggtgaattctcatgatgcagtgtttttattgttggatacgcgggagagccgt
tggcttcctacattgatggcagcagaaaaacaaaagatagtgatatgctctgccctgggc
tttgacacatatctagtgatgcgccacggcgtgaggtcagacacagagggagctgacccc
gcccccctgtcctcttacagctcaatccccggggatcagctaggctgctacttctgcaat
gatgtagtggcaccagggaattctttgaaggaccgtactctggaccagcagtgtacagta
tcaaggcccggcatctcctacatggcgtccgcgctcgccgtagaactccttgtgtccgtg
ctccagcatccagaactagggaaagccccggcggatacaagcgctagtgatgagcacctg
agtaaagactttgtttgccccctagggctggtccctcaccagattcgatgctttgtgtcc
cgtttccagcaagtgttaccggcctgtaaggcatttgataaatgtacagcttgttcaaag
actgtgatagaacagttccggcgggacggctttgacttcctgaggcgggcgttcaatgac
ccgtcctacctggaggatcttacagggctcacacagatgcatcaggaaaccctcgacgct
gaggtgtgggggttcagtgatgacgaggaatgtagcagcatggaagtctccagctcttga
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