Magallana gigas (Pacific oyster): 105340300
Help
Entry
105340300 CDS
T03920
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04120
Ubiquitin mediated proteolysis
crg04137
Mitophagy - animal
crg04144
Endocytosis
crg04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105340300
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
105340300
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105340300
04137 Mitophagy - animal
105340300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105340300
04121 Ubiquitin system [BR:
crg04121
]
105340300
03029 Mitochondrial biogenesis [BR:
crg03029
]
105340300
Enzymes [BR:
crg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
105340300
Membrane trafficking [BR:
crg04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
105340300
Autophagy
Mitophagy
Other mitophagy associated proteins
105340300
Ubiquitin system [BR:
crg04121
]
Ubiquitin ligases (E3)
HECT type E3
105340300
Mitochondrial biogenesis [BR:
crg03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
105340300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
105340300
NCBI-ProteinID:
XP_011444560
UniProt:
K1RP86
LinkDB
All DBs
Position
7:complement(14359612..14376657)
Genome browser
AA seq
764 aa
AA seq
DB search
MASNEPRRHVQKIRLTVLCAKNLAKKDFFRLPDPFSKISVDGSGQCHSTDTCKNTLDPKW
NQHYDLYVGLKDSITISVWNHKKIHKKQGAGFLGCVQIKSNAIQQLKDTGFQRLDLQRNN
ADDSDNVRGQIVISLISRDRGGSGSGPVNTDAPALIPQDPNELPEGWEERRTASGRVHYV
NHMTRTTQWERPTRPASESVRGSTSSNSLQSANAPSSRPNNRVVPNNNNNNNNEDNDCSS
NPPLPRRRSTRHRNYLNRSQLHNAIELPDGYEQRTTQQGQVYFLHTRTGVSTWHDPRVPR
DLSGSEIQDEELGNLPVGWEVRHTGSGRVYFVDHNNRTTQFTDPRLSANIQRLQTRTIEE
SAPVPIRRIIDKENDSPVPKYKRDLVQKLKILKLELQNLQPQGGHCRMEVSREEIFEDSY
RTVMKLRAKDLRKRLMVKFKGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQYARDDIYTL
QINADSGVNPEHLSYFHFVGRIIGIAIFHGHYLDGGFTLPFYKQLLAKSVTLNDLENVDP
ELHRSLVWLLENNIEAVLDHTFSVEHNSFGKVQEYELKPGGRHIKVTEENKPEYVKLYVQ
WRFMRGIEAQFLALQKGFNEIIPQHLLKPFDERELELMIGGLGKIDLDDWKKHTRLKHCT
TESNIVKWFWRSVDEFDDEMRARLLQFVTGSSRVPLQGFKALQGSTGNAGPRLFTIHQVD
ANTDNLPKAHTCFNRIDIPPYENYEKLYSKLTCAVEETCGFAVE
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggctagtaacgagcctagacgacatgtccaaaagatcagattaacagtgttatgtgcc
aaaaatttggcaaagaaggactttttccgtcttcctgatccgttttctaagatcagcgtt
gatggatccggacaatgccattcaacagacacatgtaaaaacacgctagatccgaaatgg
aatcagcattatgacttgtatgttggtctgaaagactccattacaataagtgtatggaat
cataagaaaatccacaagaagcagggagcaggctttcttgggtgtgtccaaatcaagtca
aatgccatccagcaactgaaggatactggctttcagcggctagatctccagaggaacaac
gctgacgatagcgacaatgtccggggtcagatcgtcatcagtcttatttcgagggatcga
gggggctcgggatcagggcctgtaaacacagacgctcctgctctgatcccacaagatccc
aatgaacttccagaagggtgggaggaacggcggacggccagtggaagggtccactatgtg
aaccacatgaccaggacaacacaatgggagaggcccacaaggccagcctcggagtctgtg
aggggaagtacctccagtaacagccttcaaagtgctaacgcacccagtagtcgtcccaac
aatcgtgtcgtccccaataacaataacaacaacaacaatgaggacaacgactgttccagt
aacccgccgttaccacgacgacgctccaccagacatcggaactatctcaacaggtcccag
cttcacaacgccattgagcttccagatggttatgaacaaagaactacccagcaaggacaa
gtttacttcttacacaccagaacaggtgtcagcacgtggcatgatcctagagtcccaagg
gatctgtccggatcagaaatccaggatgaggagttggggaacctccctgttggatgggag
gttcgccacacggggagtgggagggtgtactttgtggaccacaacaataggaccacccag
ttcacagatccccgactctcagccaacatccaaagacttcagactagaacgatagaagag
agtgcaccagtccccattagaagaatcatcgacaaagagaatgattccccagtcccaaaa
tacaaacgtgatctggtgcagaagctgaagatcctaaaactggagctccagaacctacag
cctcagggaggacactgtaggatggaggtctccagggaggagatatttgaggactcatat
agaacagtcatgaagttaagagccaaagacctcagaaagaggctgatggtgaaattcaaa
ggagaggagggacttgattatggaggagtagctagggagtggttgtacctgctgtcccat
gagatgctgaacccgtactatggcctcttccagtacgctagggacgatatttatacacta
cagatcaatgcagactcgggagtcaatcctgaacacttgtcctacttccatttcgtgggc
cgaatcattggtatagcaatattccatggtcattacctagatggggggttcacgttacca
ttctacaaacaattacttgccaaatccgtgacccttaatgaccttgagaacgtggaccct
gaacttcacaggagtctggtctggttactagagaacaatattgaggcagtgctagatcat
acattttcggtggaacacaattcctttggtaaagttcaggagtatgagctgaagcctgga
ggcagacacattaaagtcactgaggagaataagccagaatatgtcaaattatatgtacag
tggagatttatgaggggcattgaagctcaatttttagccctgcagaaaggttttaatgaa
atcattccacaacatttactgaagccttttgatgaaagggaacttgagttaatgattggt
ggactgggaaagatagacctggatgactggaagaagcacactcggttaaaacactgcacc
acagagagtaacatcgtcaagtggttctggcgttctgtggacgagttcgacgatgagatg
agagccaggctgcttcagtttgttacaggaagctctcgtgttccattacaaggcttcaag
gccttgcagggttctacaggaaatgcaggcccaagactgttcactattcatcaggtggat
gctaacactgacaatcttccaaaggcacacacatgcttcaataggatcgacataccaccg
tatgaaaattatgagaaactgtattccaagttaacttgtgcagtagaggagacttgcggg
ttcgctgtagagtga
DBGET
integrated database retrieval system
