Magallana gigas (Pacific oyster): 105340396
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Entry
105340396 CDS
T03920
Name
(RefSeq) low-density lipoprotein receptor-related protein 6
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04150
mTOR signaling pathway
crg04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
105340396
04150 mTOR signaling pathway
105340396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105340396
Membrane trafficking [BR:
crg04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
105340396
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FXa_inhibition
Ldl_recept_b
EGF_LRP2
PQQ_2
Lactonase
Vgb_lyase
cEGF
Motif
Other DBs
NCBI-GeneID:
105340396
NCBI-ProteinID:
XP_019927830
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Position
2:36973942..36985166
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AA seq
1160 aa
AA seq
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MALVWKILFYFTGLLIAVTCQEEDRGLVVSLLPDHVSEIVTFPGRVDNFVNSKDTTDDKS
GHRFLYFFGRTDVLSMACDPWNHSMYVLDGLSQSLYKMHHFNIWMNDTERNVTLMHKGVS
HSATSQIAFDWLSRNIYWTDDYYNWIGVQPVDTEDKTMYKIIMHDGLWSPLALSLDPIKG
YLFVAEHGANTVIERADLAGENRKTIITSVSKVPDIVVDTEEERIYWIDIGRNALETAKY
DGTDRRLVRRSTNIYIMMSGLTLYKDVVCLTKFQENEVLCLDKRSGSVVWSTTFATQQPW
SVEVYDKDLQKRVPHECEKKGCSQFCANTPTGAKCLCKEGQELDTDGKSCKVSHTLYGKG
LLVANGTDLCMLDIRVITGHESDARCFLFWKHNITHLAVDANQNKIYFTDDVSRRIQKHD
IVLNVTSIIATTSSVSGLVYDWVNDDVYWSEADSGKVKVTTTADNVRQEATIFWGLDRPT
YLTINPHNSSLYWISNKNGQYSIEGGSFDGMKRWRIAEKATLQSPSGLFYDYSYKKLFFI
DKGELKSILPDGSSLLALNSVGSDSKVVVYKDYALVTNIKNSVRTLNIHTKAMQGSLNLT
NVQKILDIAVFDKSIQLTEKSPCMVNNGGCEHICTVDTGMKKCRCGFGYTLKSDGLNCSS
IPIMEDFALTVDYTHGILYQVSLSNAEVTAVDLPPPNYPMSAAYDAKRHRVYWTDFQRYQ
ILESTIWGKNKTVVFNTGSYIPGSIQVDSSTGNIYYAATTFDFMKGVTSHIAVVRPKSEQ
NKVVISQLEVVKTIALHPQKGWLYWIDKGGAQYTAYIGRGAMDGDSRSFFVSSNLFSPTG
LTVDYQGDKLYWSDSYMNTINYIGLDGTNRGELTHDPRADIMHIAIFGSHLYYTAVNRQF
ITKVNKETGTISSWMSETPEFGRLETLDIYPGDPMPVNEKCAVNNGLCSTFCLPTPFGRT
CACEEGVLLEKDGRTCKGVKKCNQTVPNGGFDVECSGYLGTTCKYHCSQGYIPAMANQEL
HCSYNGDWGVRMEKLCEPYGPARADFSTESRELDRAALGGILGAVIFVLLAAIVVIILVL
YKRRSGMFAHAKFVNAPNVQLNPSNAEKIDEKDLSNGKDHSNGTLNGTMGTSNPVYEYKT
DTNNSNSSHHVYTTLDIQKM
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggcattggtttggaagattcttttttactttactggtttgctgatcgctgtcacatgt
caagaagaggaccgcggactggtggtctccttactccccgatcacgtcagtgagatagtc
acatttcccggcagggtagacaactttgtgaactctaaagacacgacggatgacaaatca
ggtcaccggtttttgtatttcttcggtcgcacggacgttcttagtatggcgtgtgaccca
tggaatcattccatgtatgttctggatggtctgtcccagagtctctacaagatgcaccat
ttcaacatctggatgaatgatactgagagaaacgtgaccctcatgcataagggggtgtcg
cactccgctacatcccagatagcgttcgattggctttctcggaacatctattggacagat
gactattacaattggattggtgtacagcccgtcgataccgaggataagactatgtacaaa
attatcatgcacgatggactctggtccccgctagctttgagtttggaccctattaaagga
tatttgtttgttgctgagcatggtgccaatacggttatagagcgtgccgatctggccggc
gaaaaccggaagaccatcattacctcggtttcaaaagtccctgacatagtggtggataca
gaggaagaaaggatctactggatagacatcggcaggaatgctctagaaacggccaaatat
gacggcaccgacagacgactggtgcggcgctccaccaatatctacatcatgatgagtgga
ctcactctgtacaaggatgtggtgtgcctaacaaagtttcaggagaatgaggttttgtgt
ctggacaaaagaagcggttccgtggtgtggtctaccacttttgcgactcagcagccctgg
agtgtggaggtgtatgacaaagatctacagaaaagagttccccacgaatgcgaaaagaaa
ggttgcagccaattttgcgcaaataccccgactggtgctaaatgtctttgcaaagaagga
caagaacttgacacggacggtaaaagctgtaaagtctctcatacattgtatggtaaaggg
ctcttggtagccaatggtacagacttgtgcatgctggacatccgggtgattacgggtcat
gaaagcgatgcccggtgcttccttttctggaaacacaatatcactcacctagctgtcgac
gccaaccagaacaagatttatttcacggacgacgtaagcaggaggatccagaaacacgac
attgtactcaatgtcacttccatcatagcaactacatcctcagtatctggacttgtgtac
gattgggtcaatgatgatgtatactggtcagaggccgactccgggaaggttaaggtcact
actacagcagacaacgtccgacaagaagccaccattttctggggccttgatcgccccaca
taccttacaattaacccacataactcgtcattgtactggatatcaaataaaaacggacaa
tacagtattgagggcgggagctttgacggaatgaaacgatggagaatagcggagaaagcc
acactccaaagcccatctggattattttatgattattcatacaaaaagctattcttcatt
gataaaggggagctcaaaagtatacttccagacgggagtagccttttagctttgaattcc
gtaggaagcgacagcaaggttgttgtatataaggattatgctcttgttactaatatcaag
aattctgttcgaacactcaacatccacacgaaagctatgcagggttctttaaatctaaca
aacgttcagaaaattttggacattgcagtgtttgataaaagcattcaactgacagagaaa
tctccttgcatggtcaataatggaggatgtgaacatatatgtaccgtagacacaggaatg
aagaaatgtcgctgcgggtttggatacactctcaaatcagacggactcaattgttcaagt
attccaattatggaggactttgcattgacagtagactacactcatggaatactctatcag
gtctctcttagtaacgccgaagtgacggcagtggatcttccgccgcctaactacccaatg
agcgctgcgtacgacgctaagcgtcaccgcgtgtactggacagacttccagcgataccag
attctggagagcacgatctggggcaaaaataaaacagtcgtctttaacacagggtcatac
attcccggttccattcaggttgactcatccacgggaaatatctactacgccgccaccacc
tttgactttatgaagggtgtgacgtcacatatcgcggttgtacgaccaaagagtgagcag
aacaaagtggtgatctcgcagttagaagtggtcaaaaccattgcgctgcatccccagaaa
ggatggctttactggattgacaagggaggtgcccagtacacggcttatatcgggcgaggc
gccatggatggcgacagtcgctctttcttcgtgtcctccaatttgtttagccccaccggt
ttaactgttgactaccaaggtgataagttatactggtctgatagttacatgaatacaatc
aattatattggtttggacggcaccaaccgaggggaactgacccatgatcctcgtgcagat
attatgcatattgcaatatttggatcccatttgtactacactgctgtgaacaggcagttc
atcactaaagtgaacaaagagacgggaactatttcttcttggatgagtgaaacgccggaa
ttcggacgtttggaaacattggacatatatccaggagaccccatgccagttaacgaaaaa
tgtgccgtaaataatggtctgtgtagtacgttttgtttaccaactccgttcggtcggacg
tgtgcttgtgaggaaggagttctattggagaaagatggcagaacgtgtaaaggggtcaag
aagtgtaaccagactgttccaaatggggggtttgacgtggagtgcagcggttacctagga
accacgtgcaagtatcactgttcccaaggttacatcccagcaatggcgaaccaagagtta
cactgtagctacaatggagactggggtgttcgcatggaaaaactctgtgaaccttacggt
cccgctagggccgatttctccacagagtctcgtgaactagacagggcggccctcgggggg
atcctgggagcggtcatcttcgtccttctcgccgccattgtcgttataatccttgtatta
tacaagagacgatcgggtatgtttgctcacgcaaagtttgttaacgctccaaatgtacag
ctaaatccatctaatgccgagaagatagacgagaaagacctctccaatgggaaggatcac
agcaacggaactttgaatggaactatgggaactagcaacccagtgtacgaatacaaaacc
gacacaaacaattccaacagttctcatcacgtctacacgacattggatattcagaaaatg
tga
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