Magallana gigas (Pacific oyster): 105340613 Help Entry 105340613         CDS       T03920                                  Name (RefSeq) vam6/Vps39-like protein   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism crg  Magallana gigas (Pacific oyster) Pathway crg04140   Autophagy - animal crg04142   Lysosome biogenesis crg04145   Phagocytosis crg04148   Efferocytosis Brite KEGG Orthology (KO) [BR:crg00001]  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     105340613    04142 Lysosome biogenesis     105340613    04140 Autophagy - animal     105340613    04148 Efferocytosis     105340613  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:crg04131]     105340613 Membrane trafficking [BR:crg04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     105340613 SSDB OrthologParalogGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C Clathrin VPS18_solenoid_2nd TPR_Vps41 Motif Other DBs NCBI-GeneID:  105340613 NCBI-ProteinID:  XP_011445059 LinkDB All DBs Position 6:complement(38026032..38039127) Genome browser AA seq 877 aa AA seqDB search MHDAYESTTLLEKLPLKIEAIACYDDILLVGTKEGHLLQYKIKRGTGDNKYDVVLERSNK NFGKKPITQLYAVPELFLLISLTENVLSVHDLKTFQLIVCLSRTKGATLFAVDVKNAKTL SGGDQCMLRVCVAVRKKLQIMFWKNKTFHDLEDFTLYEVPKAMCWCKDSICVGFYKREYF LVKVNSGDTKELFPLGSKQQDPIIARLDDDRLMLGRDESSILIDSDGNPTQRYPISWSDL PIQIENNPPYVIAVLPKYVEVRTVEPRLMIQNIPLSKAHTICQGSGHIYISSQTSVWKLT PRSLNFQIKQLLESKEFELALKLADMTEDRPEEKDRLIHRIRTLYAFHQFCQHKFEESMA IFVKLGTDPSHVIGLYPNLLPQEFRNQLTYPERPPDLEGGELEKALLALQDYLTQKRKEV SKDINKEIETTAIKEGDVTIKSKKQLSQIIDTTLLKCYLQTNDALVAPLLRLKDNNCHVE ESEKVLKKKEKFSELIILYEKKGLHEKALQLLVKQAARPNSPLKGHDRTVQYLQHLGKEH LKLIFEYAEWVLKEHQEDGLKIFTEDLPEVENLPREEVLNYLENINSELAIPYLEHIIWK CDDKSPEFHNRLAQLLQEKVQKLMKEYLQGLPEGHIPKRAGQEPGELGQVRSTLLKFLNM SEFYIPERLLTRFPLGFYEERAILLGRLGRHEQALGIYVHVLHDDRLAEEYCKKYYRKDK DSLKDVYFFLLKMYLDPPSPSTLGVSASQGIVPKPNMNAALRLMKEHAPKIDTSKSLELL PSTTKMSEILAYLENVMEHQAMIRRKNQVLKSMLYAENLQVHEQRMFYEKCKVTITDEKM CRVCRKKIGNSAFVRYPNGVIVHYYCCKDPKECPVEV NT seq 2634 nt NT seq  +upstreamnt  +downstreamnt atgcatgatgcatatgaatctacaaccttattggaaaagctgcctctgaaaattgaagcc atagcatgctacgatgacattttgcttgttggtacaaaggaaggacatttacttcaatat aaaataaaaagggggacaggggataataagtatgatgtagtgttggaacgttcaaataag aactttggaaagaaaccaatcacccagctatatgcagtcccagaactcttcttattgata agtctgactgagaatgtgttaagtgtacatgacctgaagactttccagttaatagtatgt cttagcagaacaaaaggggccacattgtttgcagtagatgtaaagaatgcaaaaactctt tcagggggtgaccaatgtatgttacgtgtgtgtgttgctgttaggaagaaattacagatt atgttttggaaaaacaaaaccttccatgacttagaggatttcacattgtatgaagtccca aaagccatgtgctggtgtaaagattccatatgtgtaggattttataaaagagagtacttt ctagtcaaggtcaattcaggtgataccaaagagttatttcccttgggcagtaaacagcag gacccaatcatagctcgtttagatgatgacaggttgatgctggggcgggacgagtcctcc attctgatcgactctgacggcaacccgacacagaggtaccccatcagctggtctgatcta cccattcaaattgaaaataatccaccgtatgtgattgctgtgttaccaaagtatgttgaa gttcggactgtggaacctcgactgatgattcagaatattccactttctaaagctcacacc atttgtcaagggagtggacatatatacatctcatctcagaccagtgtgtggaagcttacc cctagatctctaaatttccagatcaagcaactcttggagagcaaagagtttgaactggcc ttgaaattagctgacatgacagaagacagaccagaagaaaaggacagactcatacacaga attaggactctttacgcatttcaccagttttgtcagcacaagtttgaggagtcgatggcc atttttgtcaaacttggaacagatccttcccatgtcataggactatacccaaacttgctc ccccaggaatttaggaaccagttaacctatcctgagagacctcctgacctagagggaggg gaactagaaaaggcattactggcattacaagattacctcactcagaaaaggaaagaagtt tcaaaggatatcaacaaagagattgagaccactgccatcaaagaaggagatgtgacaata aaatctaagaaacaactgagtcagattatagacacaactcttctcaagtgttaccttcag accaatgacgctcttgtggcaccattgcttcgcctcaaggacaacaattgtcatgttgaa gaaagtgagaaagttctcaagaagaaagaaaagtttagcgaactcattatattatacgaa aaaaagggtttacatgagaaagctctccagcttcttgtgaaacaagctgccagacctaat tctccactaaaagggcatgatagaactgtccagtatcttcagcatttaggtaaggagcat ctgaagttgatctttgagtatgctgaatgggtgttaaaggagcaccaagaggatggactc aagatttttacagaggatttacccgaagtagaaaatctcccgagagaggaagttttaaat tatttagaaaatatcaatagtgaacttgccattccatacttagaacacatcatttggaag tgtgatgacaagtcacctgaattccacaatagattagcccaattactgcaggagaaagtt caaaagctcatgaaggaatacctacaagggcttccagaaggacacattccaaagcgagcg gggcaggagccaggggagctaggccaggtccgcagtactctcctcaagttcctcaacatg tcggagttctacatcccagaaaggctactcaccaggttcccattgggtttctatgaggag agagccatcttgttgggtagattaggcagacatgaacaagctctcgggatctatgtacat gttcttcatgatgatcgactggcagaggaatactgcaagaaatattacagaaaagataaa gacagcttaaaagatgtgtatttctttttacttaaaatgtacttggaccctccttcccct tccactttgggcgtgtcagccagtcaaggaattgttccaaaacccaacatgaatgctgct ttgagacttatgaaggaacatgctccaaaaattgacactagcaagtcacttgaactcttg ccatctacaaccaaaatgtcagaaattttggcatacctagagaatgtgatggaacatcag gccatgattaggaggaaaaaccaagtgttgaagagcatgttgtatgcagagaacctccag gtgcatgaacaaagaatgttttatgaaaagtgtaaggtaaccatcactgatgaaaagatg tgtcgggtctgtcgcaagaaaattggaaacagtgcctttgtgaggtatcctaatggagtc attgttcactattactgttgtaaagaccccaaagagtgcccagtggaagtctga

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