Magallana gigas (Pacific oyster): 105340884
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Entry
105340884 CDS
T03920
Name
(RefSeq) rRNA 2'-O-methyltransferase fibrillarin isoform X1
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105340884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crg03009
]
105340884
Ribosome biogenesis [BR:
crg03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
105340884
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrillarin
GCD14
Methyltr_RsmB-F
PCMT
Motif
Other DBs
NCBI-GeneID:
105340884
NCBI-ProteinID:
XP_011445434
UniProt:
A0A8W8LFN7
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All DBs
Position
2:46457689..46461923
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AA seq
318 aa
AA seq
DB search
MTRPDFSPRGRGGGRGRGGDRGGRGGFGDRGGRGGFGGRGGGRGGGFGGRGGGFGRGRGG
DRGGRGRGGGRGGGGRGGFRGGRSVVVEPHRHEGVFIARGKEDALVTLNMVPGETVYGEK
KIVVEEGEKKTEYRAWNPFRSKLAAAILGGVDKIYMKPGSKVLYLGAASGTTVSHVSDIV
GSDGLVYAVEFSHRSGRDLINVAKKRTNIIPIIEDARHPHKYRMLVGMVDTIFADVAQPD
QARIVAINAHHFLKNNGHIVISIKANCVDSTAEPEAVFAGEINKLKGEKIKPQEQLTLEP
YERDHAVVVGVYRPPPKK
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgacaagaccagatttttcacctagaggccgaggaggtggtcgtggtagaggaggggac
agaggtggccgtggaggttttggggacagaggtggccgtggaggttttgggggtagaggt
gggggtaggggtggaggattcggtggtcgaggaggtggatttggaagagggagaggaggt
gatcgcggtgggagaggaagaggaggaggaagaggaggtggtggaagaggtggtttcaga
ggtggaagaagtgttgttgttgagccccacagacatgaaggtgtattcatcgccagaggt
aaagaagatgctctggtgactttgaatatggtgcctggagaaacagtgtacggggagaag
aagattgtagtagaggaaggagagaagaagactgagtacagagcatggaacccgttcaga
tccaagttagctgcagcaattcttggaggtgttgacaaaatctacatgaaacctggttca
aaagtcctatacctgggggcagcctcgggaactacagttagtcatgtctcagacatagta
ggatcagacggtttggtgtatgctgttgaattttcacacagaagtggtagagatctgatc
aatgtagcaaagaaaaggaccaacattatcccaattatagaggatgccagacatccacac
aaatacagaatgcttgttggtatggtggacacaatatttgctgatgttgcgcagcctgat
caagccagaattgtagccatcaatgctcatcacttcctcaaaaataatggtcacattgta
atatccataaaggccaattgtgtggactcgaccgccgagccagaggcagtgtttgccggt
gaaatcaacaaattaaagggggagaagattaagccccaggaacagctgacgttagagcct
tacgaaagagaccacgcagtagtggtgggagtctacaggccacctccaaagaaatga
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