Magallana gigas (Pacific oyster): 105341052
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Entry
105341052 CDS
T03920
Name
(RefSeq) uncharacterized protein isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crg03000
]
105341052
03036 Chromosome and associated proteins [BR:
crg03036
]
105341052
Transcription factors [BR:
crg03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
105341052
Chromosome and associated proteins [BR:
crg03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
105341052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-C2H2_7th_ZNF462
zf-H2C2_5
zf-C2H2_jaz
zf-met
GAGA
zf-C2HE
zf-C2H2_2nd_ZNF462
Zf-C2H2_ZNF451_C
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
105341052
NCBI-ProteinID:
XP_011445645
LinkDB
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Position
3:44692749..44702539
Genome browser
AA seq
880 aa
AA seq
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MDSQQELSPPSTISTQQTTMNLQDLQSYLVTFNKEIEPSDQNAFQFKTVPVGTNLEDDKS
KIEKDGNPEGTTTGETEDIGETEKVVDIGGIAVNLGQIHEDENVEDLQVQVPMSEIGNNS
MIQVISVNGKTSYQLVTGNPGSAIFTSASSTEPQIGQSVISAEDKSGAEAVLASVAVSSP
GHVTNQQTLQVESGEIAGAQLVALQNSADSSQPQLVAVQTDELPPEAVEASQMLIPSMGG
GGDKLPMVTLMPQDGSPGEPMNYFLIVTNNGEKDGTSLKPITLDMRSMNALKTEKDAVEE
MIDEDGNVRRVIEIAPKFDIHGTHTTLLQCRYCDYTSPKRYLLMRHMKSHSEDKPHKCNI
CDRGFKTMASLQNHVNTHTGTRPHKCKECESAFTTSGELVRHIRYKHTFEKPHKCTECEY
ASVELSKLKRHMRSHTGERPYQCMHCNYASPDTYKLKRHLRIHTGEKPYICDICQARFTQ
SNSLKAHKLIHTGNKPVFQCELCPTTCGRRTDLKIHMMKLHTSTTPLQCRKCSETFPDRY
SCKMHMKTHEGERCFKCEQCDYAAMSLRHLEAHNLTHTGEKPFECDECNATFRQKQLLKR
HKGLYHTDESSYISTGKLIIHKGSTDENRSKPEGIESSLTSDQLIHGSLLSDLKAGRLGD
MPKVVIVHPDGTVEEVTSKLHTLAQEKSVEEVIVANKLEEKSMEEVMMQIVDEETQESES
SKSGAPDDYCTFTVSQTGDRELDGAPIQTYTMISNGSQILRDEGTQATLETDSEQSNESQ
NNLATLISSQTIQRTADTVLVRANTDNISTLQEEAGMKIELPTTLDVNGDPITFYTSPSS
IITSQGLTIETLDSSKKRKGSGDAVTEQAKKLCTDDVSKN
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggactcgcaacaggaactgtctcctccatctactatctccacccaacaaaccaccatg
aatctccaagacttacaaagctacctggttacattcaacaaagaaatagagccaagtgat
caaaatgcctttcagttcaaaactgtgccagttggaacaaacctagaggatgacaagtca
aagattgagaaagatggaaacccagaaggaacaacaacaggtgaaacagaggatattggt
gaaacggaaaaagtagttgacataggaggtattgccgtaaatttagggcagatacatgag
gacgagaatgttgaagatcttcaggttcaagttcccatgtctgagattggaaacaacagt
atgattcaagtcatatcggtcaacggtaaaaccagctaccaactagtgacaggaaaccca
ggctcagcaatatttacatcagcttcctccaccgagccacagattggtcagtctgtaata
tctgctgaagacaagtcaggggcagaagctgtgctagcatctgtggcagtatccagtcct
ggtcatgtaacaaaccaacaaactttacaggtggagtctggagagattgcaggagcacag
ttagtagctctacaaaactctgccgatagctcccagccccagctagtggcagtgcagacg
gatgagttacctcctgaggcagtggaagcctctcagatgcttatacccagcatgggagga
ggaggagataaactacctatggtcaccctcatgcctcaagatggaagcccgggagagccc
atgaattattttttgattgtgacaaataatggggagaaagatgggacaagtttaaagcct
ataactctagatatgagatctatgaatgcattaaagactgagaaagatgcggtggaggaa
atgattgatgaggacggcaatgttagacgagtcattgaaatagcaccaaagtttgacatc
catggaacacacaccaccttgttgcagtgtcggtactgtgactacactagtcctaaacgc
tacctattgatgaggcatatgaagagtcactcagaggataaaccacataaatgtaacatc
tgtgatagaggattcaaaaccatggcctctttgcagaaccatgtaaacacacatactgga
actcgaccacacaagtgtaaagagtgtgaatctgccttcaccacatcaggagaacttgtt
agacacatcaggtacaagcacacttttgagaaacctcataaatgcaccgagtgtgagtat
gccagtgttgagctgagcaaactcaaaagacatatgagatctcacacaggggaaagaccc
taccagtgcatgcattgtaattatgccagcccagacacatacaaactaaagcgccacttg
cgcatacatactggggaaaagccatacatttgtgatatctgtcaagctaggttcacccag
agcaacagtctgaaggcacataagttgattcacactggaaacaagccagtgtttcagtgt
gaactctgtcccaccacctgtggcagacgaaccgaccttaaaatccacatgatgaaactt
cataccagtaccactcctctgcagtgcaggaagtgttctgagaccttccctgatcgatat
tcctgtaagatgcacatgaaaacccacgaaggagagcgatgctttaaatgtgaacaatgt
gactatgctgcaatgtccctgcgccacttagaagcacacaatcttactcatactggagaa
aaaccttttgaatgtgatgaatgcaacgctactttccgacagaaacaattacttaaaaga
cacaaaggcctatatcatacagatgaatctagctatatttctactggaaaattaattatc
cataaaggaagtaccgatgaaaataggtcaaaacctgaaggcatagaatcctccttaaca
agtgatcaactgatccacggaagtttgttgtctgatctgaaagctggtcgtttgggtgac
atgccaaaggtagttattgtacaccctgatggtactgtggaagaagttacttctaaactg
catacactggctcaagaaaagtctgtggaggaggtcattgttgcaaataaactagaggaa
aaatcaatggaagaggtgatgatgcaaattgtagatgaagagacacaggaatctgaaagt
tccaaatccggagccccagatgactactgtacatttactgtatcacaaactggagacaga
gagctagatggagctcctattcagacctacaccatgatttcaaatggatctcaaatacta
agagatgagggcacacaagctactctagaaacagatagtgaacaaagcaatgaatctcag
aacaatttagccaccctgatcagcagccagacgattcagaggacggcagatacagttcta
gtcagggcaaacactgacaacatctcaactctacaagaggaggctggaatgaagatagaa
ttgccaaccactttggatgtcaatggggatcccatcacattctatactagtccttcctct
attatcacatcacagggtttaaccattgagacattggacagcagtaaaaaaagaaaagga
tcaggagatgctgtcacagagcaagcaaagaagttgtgtacagatgacgtgtcaaagaat
tga
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