Magallana gigas (Pacific oyster): 105341084
Help
Entry
105341084 CDS
T03920
Name
(RefSeq) E3 ubiquitin-protein ligase MIB1 isoform X2
KO
K10645
E3 ubiquitin-protein ligase mind-bomb [EC:
2.3.2.27
]
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crg04121
]
105341084
Enzymes [BR:
crg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105341084
Ubiquitin system [BR:
crg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105341084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SH3_15
MIB_HERC2
Ank_5
Ank_4
Ank_3
zf-C3HC4_3
ZZ
zf-C3HC4_2
Ank_KRIT1
Sina_RING
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
105341084
NCBI-ProteinID:
XP_011445686
UniProt:
A0A8W8IBB2
LinkDB
All DBs
Position
7:complement(19566667..19603698)
Genome browser
AA seq
1024 aa
AA seq
DB search
MNAENIDPNISTTNRVARVNMVEGVGARVVRGPDWKWGKQDGGEGHVGTVRNFESPEEVV
VVWDNGTAANYRCAGAFDLRIVDSAPTGIKHDGTMCDTCRQQPIFGIRWKCAECSNYDLC
SVCYHGDKHNLRHRFYRITTPGSDKCSVEPRRKSKKITARGIFPGARVVRGVDWQWEDQD
GGNGRRGKVTEIQDWSAASPRSAAYVLWDNAAKNLYRVGFEGMADLKVVNDAKGGSFYRD
HLPLLGEQGPGSRSGPGGLAIGDQVNVDLELEIVQSLQHGHGGWTDGMFECLGTTGTVVG
IDEDHDIVVSYPSGNRWTFNPAVLTKVNTPSAVPSTSNEATPSVTPSAQFAVGDLVQICN
DPEKIKLLQRGHGEWAEAMMPTLGKIGRVQQIYHDSDLKVEVCGTSWTYNPSAVTKVASS
DGAAIGNSSGERLSALLKKLFETHVTGDANEELVKAAANGDYVKVEDLLSRPDNDVSYQP
AQNAAEKADNSHLAANGMFAGHTALQAASQNGHTDVIKILIKHDVDFEIEDKDGDRAVHH
AAFGDEPSVIEQLQRGGADLNARNKRRQTPLHIGVNKGHIGVVKTLLDLGCHPSLQDSEG
DTPLHDAISKKRDDMISLLLEHHADLTITNNNGFNSLHHAALRGNPSAMRILLSKIPRPW
IVDEKKDDGYTALHLAALNNHVEVAELLVHQGKANMDLQNVNLQTALHLAVERQHTQIVR
LLVREGCNLNIPDKDGDTPLHEALRHHTLSQLRQLQDMQDVGKLLMGLGTPGADKKSSAS
IACFLAANGADLNIKNKKGQTPLDLCPDPNLCKALAKCHKERHSPNGTASNTVILRNDQE
SLEECMVCSDLKRDTLFGPCGHIATCSLCSPRVKKCLMCKEQVQSRTKIEECVVCSDKKA
STLFLPCGHMCACDGCGQLMKKCVQCRSSIEKTVPFIVCCGGTPPPAPQPPGIMNNGSRD
NTKDIQKLQQQLQDIKDQTSCPVCMDRLKNMIFLCGHGTCQMCGDRMAECPICRKAVEKR
ILLY
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgaaaatatagaccctaacattagcacgactaatcgtgtagctcgtgtgaac
atggtcgagggcgtcggggcgcgtgttgtaagaggtccagattggaaatggggaaaacag
gatggtggagagggccatgttggtactgtgagaaatttcgagtctcccgaggaagttgtc
gttgtgtgggacaatgggacagcagccaattacagatgtgcaggggcattcgaccttagg
atcgtcgatagtgctccaacaggaataaaacacgatggcacgatgtgtgacacttgcagg
cagcaacctatatttggcattagatggaagtgtgctgaatgctccaattatgacctgtgt
agtgtctgttaccatggcgataaacataatttacggcaccgattttacagaatcacgaca
cctggaagtgacaagtgctcagttgaacctagaagaaaaagcaagaaaatcacggcccgg
ggaatatttccaggggcgcgggttgtgaggggggtggactggcagtgggaggatcaggac
gggggcaacgggcgtcggggcaaggtcacagagattcaagactggagcgcggccagtccc
aggagtgcagcctatgtgttgtgggacaatgctgccaagaatctctacagagtgggcttt
gagggaatggcagatttgaaggttgtgaatgatgccaaaggaggctctttttatagggac
catcttcctctgttgggagaacaaggtccagggtccagatcaggtccggggggactagcg
attggtgaccaggtcaacgtcgaccttgaacttgagattgtacagtctctacagcacggg
catggagggtggactgacggaatgtttgagtgtctgggtaccacaggaactgttgttggc
attgatgaagaccatgatattgttgtatcttatcccagtggaaaccgatggacattcaac
cctgcagttcttacaaaagtgaacacccctagtgctgtcccctccacctctaacgaggct
acgccctcggtcaccccctcggcccagtttgctgtgggtgacctagtccagatctgtaat
gacccagagaagatcaagctcttacagagaggccatggggaatgggcagaggccatgatg
ccgactttgggtaagatcgggcgtgtccagcagatttatcacgacagcgacctaaaagtg
gaggtctgtggcacctcgtggacctacaacccttccgccgtcacgaaagtggcctcctcg
gacggtgctgccataggaaactcctcgggagagagacttagcgcattattgaagaagtta
tttgagacccatgtgactggcgatgctaacgaggaactggtgaaggcggcggccaacggg
gactatgtcaaggtggaagatctgctcagtcgaccagacaatgatgtgagttaccaaccc
gctcaaaacgcagcagagaaggcagataactcacacttagcagccaatggaatgtttgct
ggtcacacggccctgcaggcagcatcgcagaatggacacaccgacgtcatcaaaatcctc
atcaaacacgatgtcgacttcgaaattgaggacaaagatggcgaccgtgcagtgcatcat
gcagcttttggagatgaacccagcgtcattgaacagttacagcgcgggggagctgacctt
aacgcccgcaataaacgcagacagacaccactgcacataggggtcaacaaaggtcacatc
ggcgtggtcaaaactctcctggacctgggatgtcacccgagtctgcaggattctgagggg
gataccccacttcatgacgccatcagcaaaaaacgtgacgacatgatttccctgcttctg
gaacatcacgcagatctgacgatcaccaacaacaatggcttcaactcactgcatcacgct
gctttacggggaaatcccagtgcaatgcggatccttctgtccaaaattccccggccatgg
attgtggatgagaagaaggatgacggatacaccgccctccacttggcggcgctaaacaac
catgttgaagtggcggaacttctagtccaccaggggaaggctaacatggacttgcaaaac
gtcaatctacaaacagcattacacctagctgtggaacgacaacacacacaaattgtcagg
ctgttggtgagggagggctgtaacctgaacatcccggacaaggacggggacacacccctc
cacgaggcactccgacaccacaccctgtcccagctccgacagcttcaggacatgcaggac
gttggcaagcttctaatgggcctgggaactcctggagccgacaagaagtccagtgcttct
attgcctgcttcctggccgcaaacggagctgacctgaatatcaagaacaagaaaggccag
accccactggacctttgccccgaccccaatctgtgtaaagccctggccaagtgtcacaaa
gagaggcatagtccaaatggcactgcctctaacacggtcatcctgcggaatgaccaggag
tcactggaggagtgcatggtctgctccgacctgaagagggacaccctgtttggaccgtgc
ggacacatcgccacctgctccctctgttccccgcgggtcaagaagtgtctgatgtgtaag
gaacaggtccagtcccgcaccaagatagaggaatgtgtagtgtgctcggataagaaggcg
tccactctcttcctgccctgtggacacatgtgtgcctgtgatggctgcgggcagctgatg
aagaagtgtgtgcaatgccgatcctccatagagaagactgtgccattcattgtgtgctgt
ggaggaactccgcctccggcaccacaaccccctggtataatgaacaatggttcccgtgac
aacacaaaagacatacaaaagctacagcaacaattacaggacattaaggatcagactagc
tgtccagtgtgtatggaccgcctgaaaaacatgatcttcctctgcggccacggcacatgt
cagatgtgtggcgacaggatggcggagtgccccatatgtcgaaaggcggtggaaaagcgg
atccttctgtattag
DBGET
integrated database retrieval system
