Magallana gigas (Pacific oyster): 105341158
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Entry
105341158 CDS
T03920
Name
(RefSeq) crossover junction endonuclease EME1 isoform X1
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03440
Homologous recombination
crg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105341158
03460 Fanconi anemia pathway
105341158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crg03400
]
105341158
DNA repair and recombination proteins [BR:
crg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
105341158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EME1-MUS81_C
CUE
ERCC4
Motif
Other DBs
NCBI-GeneID:
105341158
NCBI-ProteinID:
XP_065923249
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All DBs
Position
7:complement(27596412..27629334)
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AA seq
623 aa
AA seq
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MNLDESIEQISSMCPSFTYDEIKSDLSVTNDVELTVNRLLDKSITNVGTQGADVKSAMDF
SSDDEELPQIYKPSSLSARATTNQTGPPSINKSSLQVSIIIDSDEDVEVTGTRGPSRGLG
QVNHSMSDSSEDEICLPSLRDRILSSVSSSKSISSSETITSMKQKLSSENKCDRTALNYL
NSGSMHSKGLASNGYSSSLACSEETVFSDGSISTNNFDSNMDSQSTVSLSQSSGCSIGDL
TKKKRTKEEIAALKHEAKMRKMNNKKSREEKALSKELERQRKEQIRIAERERKKQMGGSK
DCLQYLILMLDTRIVNNGGHGVAIFKACEALGIQYITKEQTVPFSITWNRQVTSINVSRE
NQVETVKSEQMEEDVLVLLPVADFVNFVQNHKKCGSELGCGPTLINYVQTVKQHLPNSIL
SFVVIGMEKYFRDQKTKVQRKHRAAVLSSERVTLCTDSDQGSVHRLDVEEAITNNQLQTD
VMVYLLETSEELAEFVRTFSKAVAEKPAKKDRLQTAFFDDGVSTVKVDKNGQGLLKVWKQ
QLLQFKNISPDIADAIVQAYPSPHLLMEAYRKCNDSNEQEKLLENIVVRRGAGVLETSRR
VGKEMSRRICTFVTGSNPNEVIK
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagatgagagcattgaacagatatcgtctatgtgtccatcttttacttatgat
gaaatcaaaagcgacttgtctgtaacaaatgatgttgaactgacagtgaatcgattactt
gataagtccataacaaatgtaggcactcagggagctgatgtaaaatcagcaatggatttc
agcagtgatgacgaagaactaccacaaatatacaaaccctccagtttatctgccagggct
actacaaaccagacaggtccaccatcaataaataaaagctccctgcaggtttccattatt
atagacagcgatgaagatgttgaagttactggtacccgtggaccatccagaggactcggg
caagtgaatcatagcatgtcggacagctcagaagatgaaatctgtttgccatcacttaga
gacagaatattaagtagtgtgtccagtagtaaatccatttcatcatcagaaacaatcaca
tctatgaaacaaaaactttcatccgaaaataaatgtgacagaactgctcttaattatcta
aactcaggaagcatgcacagtaaaggtctcgcttctaatggatattcaagttcattagca
tgttccgaggaaactgtttttagtgatggatcaattagcacaaacaattttgattccaat
atggatagtcagtctacagtttccttgtcacagtcttctggatgcagcattggagatttg
accaagaaaaaaagaacaaaggaggaaattgcagccttaaaacatgaagccaagatgcgg
aaaatgaataacaagaaatccagagaagaaaaggcattgtccaaagagctagaaaggcaa
agaaaagaacagatacgcattgctgaaagagaaagaaagaaacagatgggaggatctaag
gactgtttgcaatacctgattttgatgttggatactcgtattgtaaacaatggagggcat
ggagtggctatatttaaggcatgtgaagcattagggatacagtacatcactaaagaacag
actgtaccattcagtatcacatggaacagacaagtcaccagtatcaatgtatccagggaa
aatcaggttgaaacggtgaaatccgagcagatggaggaagatgtccttgtgttactccca
gttgctgactttgttaattttgtacagaatcataaaaagtgtggcagtgaattaggatgc
ggaccaactctaataaattatgtacagactgtcaaacagcatttacctaattctatttta
tcatttgtcgtcatagggatggaaaaatattttagggatcagaaaactaaggtacaaagg
aagcacagagcagcagtgttatccagtgagagggtgactctgtgtacagacagtgaccag
gggagtgttcatcgtctggatgtcgaagaggccattacaaacaaccagcttcagacagat
gtgatggtttatttgttggagacctcagaggaactggctgagtttgtacgcaccttctct
aaggccgtagcagagaaacctgcaaagaaagatcgattacagacagctttctttgatgat
ggtgtatctacagtgaaagttgacaagaatggacaaggtcttctgaaggtttggaagcaa
cagctgctgcagtttaagaacatcagtcctgacattgctgatgctattgtacaggcctat
ccctcccctcacttactgatggaggcatacagaaaatgcaatgattcaaatgaacaagaa
aaattattagaaaatattgtggtaagacgaggagctggtgtgttggagacgtcacgcaga
gtggggaaggagatgtcgcggagaatctgcacttttgtgaccggttcaaatcctaacgaa
gtaatcaaatga
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