KEGG   Magallana gigas (Pacific oyster): 105341228
Entry
105341228         CDS       T03920                                 
Name
(RefSeq) small ribosomal subunit protein RACK1
  KO
K14753  guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
crg  Magallana gigas (Pacific oyster)
Pathway
crg03010  Ribosome
Brite
KEGG Orthology (KO) [BR:crg00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    105341228
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:crg03019]
    105341228
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:crg04147]
    105341228
Messenger RNA biogenesis [BR:crg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     105341228
Exosome [BR:crg04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   105341228
  Exosomal proteins of colorectal cancer cells
   105341228
  Exosomal proteins of bladder cancer cells
   105341228
SSDB
Motif
Pfam: Beta-prop_WDR3_1st WD40 Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40_Prp19 WD40_Gbeta WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_EML_2 EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_SPT8 WDR90_beta-prop_4th Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_Aladin WD40_MABP1-WDR62_1st Beta-prop_EIPR1 TRM82_WD Beta-prop_RIG_2nd DSE1_N Beta-prop_SCAP Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_VPS8 Beta-prop_NOL10_N Beta-prop_IFT140_1st CFAP251_N Beta-prop_DCAF12 Beta-prop_HPS5 ASA1 Beta-prop_DCAF4 eIF2A Beta-prop_WDR75_2nd Tricorn_2nd Beta-prop_NUP159_NUP214 PROPPIN Beta-prop_ELP1_1st DUF1416
Other DBs
NCBI-GeneID: 105341228
NCBI-ProteinID: XP_011445926
UniProt: K1RV41
LinkDB
Position
7:complement(53121845..53128316)
AA seq 317 aa
MAEQMTLRGTLQGHGGWVTQIATTPQYPDMVLSASRDKTLIMWKLTRDDANYGLPFKCLK
GHGHFVSDVVMSSDGQFALSGSWDKTLRLWDLSAGTTTRLFCDHEKDVMSVAFSADNRQI
VSGSRDKSIKLWNTLGVCKYTIQDEGHTDWASCVRFSPNTANPIIVSCGWDKMVKVWNLT
NCKLKTNHIGHSGYLNCVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDVINSLC
FSPNRYWLCAATGPSIKIWDLEGKIVVDELRQEVLSTNSKAQAPQCISLAWSADGQTLFA
GYTDNLIRVWQVSMAAR
NT seq 954 nt   +upstreamnt  +downstreamnt
atggcagagcagatgactctgagagggaccctgcagggtcacggaggatgggttacccag
attgccacaactcctcagtatccagacatggttttgtcggcatctagggataaaactctt
attatgtggaagttgaccagggatgacgcaaactatggacttccatttaaatgtttgaaa
ggacacggtcactttgtatctgatgtcgtcatgtcatccgatggccagttcgctctgtct
ggatcctgggacaagactctgagactgtgggacttgagtgctggaacaaccactcgtctc
ttctgtgatcacgagaaagatgtgatgagtgtggctttctcagccgacaaccgacagatt
gtgtctggatccagagacaaatccatcaaactgtggaacactcttggagtctgtaaatac
acaattcaggatgagggtcacaccgactgggcttcatgtgtgcgattttctcccaacaca
gccaacccaatcatcgtgtcgtgtgggtgggacaagatggtcaaggtgtggaacttgacc
aactgcaaactaaagacaaaccacattggacactctggttacctgaactgtgtcaccgtc
tctcccgacggctccctgtgtgcttctggtggcaaggatggacaggccatgctctgggac
ctgaatgaaggcaagcacctgtacacactagacggtggggacgtcatcaactcactgtgc
ttcagccccaacagatactggctgtgtgccgccacaggacctagcatcaaaatctgggat
ctggaaggcaagattgtagtggatgagctcagacaggaagtgctctccacaaactccaag
gctcaggccccacaatgcatctctctggcctggtccgccgacggacagacactgtttgct
ggatacaccgacaacctgatccgtgtctggcaggtttccatggcagcacgctag

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