Magallana gigas (Pacific oyster): 105341580
Help
Entry
105341580 CDS
T03920
Name
(RefSeq) toll-like receptor 3
KO
K18808
toll-like receptor 13
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
crg04054
]
105341580
Pattern recognition receptors [BR:
crg04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
105341580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
LRR_4
TIR_2
Motif
Other DBs
NCBI-GeneID:
105341580
NCBI-ProteinID:
XP_034300166
LinkDB
All DBs
Position
2:39351265..39359642
Genome browser
AA seq
718 aa
AA seq
DB search
MRRDSIGAMRYRAMNVKRTFLWCLFLVGLVVSERCGDGYCKCKRAEKVATCMSKKRQLNY
FPTLPSYVQQLKYSGNYLPNLTRDSLINMTRLNLTGLNLDNNMMKNVDPNAFEDLIYLVK
LQISHDKILNGNILASALHNVSRSVEKLVLQHNKWDWIPDNVFDGLNGSNVYYIDLSYNN
LRSFNGTRLLLKIPRLKYLILDENPLSHSDIDFHNMEYMFKISLQNTYIQKVPTFCDGNG
ESFLPRLRSLYLDRSSMKSVSRDDFPGRCLPFLWKLSLSFSDISSIQNDTFAGLPVLKYL
LLQNMVKLRLLDYFAFHSASLELLNLGSSKFKFVYKGRYNNDLFKFTPNMNNLSLFDNQI
TDGSTLKTLLWHLVRLQKLNLQSCDLNYLARGTFDRMLDLRIIILKGNSLYGWDPDMFSK
LSNLNTLYLSGNNIAVVNRTSLEFIAKINLEYIDLANNPLACSCQQLWFRDWLKESKNIT
VPHYPSRYVCRSPPEWDKKMLASFNYTEEDCREKNPWILIGSVLGSVVFVCMVVVIVIYT
HLPTVRNIIYLIRLRRKGYVRLVNSEEYMFDCYVVSCETDEHWVFQTLYSTLEDEYAFHL
CIPSRDFDVGESKADQIEEKMKESKKIIIVMSNDFAQDEWCQFQLEKAQERIRNQGKEAV
VLIMLRDIDHKHMTSTIKNLLRKSSYATWVKGKIATKLFWDIVVAAIEKPFGNPPVAI
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgggacagtatcggtgctatgagatatagagcaatgaacgtaaaaagaacattt
ttgtggtgcctttttctcgttggacttgttgtgtctgaacgatgtggagacggttattgc
aagtgtaaaagagccgaaaaagttgccacatgtatgtccaaaaaaagacagctgaactac
tttcctactctgccatcttacgttcaacagctcaagtacagcggcaactatcttccaaac
cttactcgagactctctcatcaatatgaccaggctaaatctcacaggactcaatctagac
aataatatgatgaaaaatgttgatccaaacgctttcgaagatttgatatatctcgttaaa
cttcaaatttcccacgacaagatacttaatggaaatattcttgccagtgctcttcataat
gtgagtcgttccgtcgaaaagttagttttgcagcacaacaaatgggattggatacctgac
aacgtgttcgatggtctaaatggctcaaatgtttactatatcgatctctcttataacaac
ttgcgttcattcaacggtacacggcttctgctaaaaattcctagactgaaatacttgatt
ttagatgaaaatcccttatcgcatagtgatatcgattttcataacatggaatatatgttt
aaaataagcttacaaaatacatatatccaaaaagttcccacgttttgtgacggcaatgga
gaaagttttttgcctcgtttgcgatctctctatttggatcgctcttcaatgaaatccgtt
tctagagacgattttcccggtagatgtctgccatttctttggaagttgtctctctcattc
tcagacatcagcagtattcaaaacgacacatttgctggtttgccagtgctgaagtatctt
ttgttacaaaatatggtcaaactcagactcctggattattttgcttttcattctgcatct
cttgaactattgaatcttggatcttcaaagtttaaatttgtttacaaaggtcgatacaat
aatgatttgtttaagtttacaccaaacatgaacaatctttctcttttcgacaatcaaatc
acggatggttctactttgaaaacgcttttatggcacctggtcagactgcaaaagttaaat
cttcagagctgtgatttaaattatcttgcacgtggaacatttgatagaatgctagatctt
cgaattatcattttaaaaggcaatagcttgtacggatgggatcccgacatgtttagcaaa
ctttcaaatctgaacacactgtacctgtctggaaacaatattgccgttgtgaaccgaacc
tcccttgagttcatagctaaaataaaccttgaatatattgacttagcaaacaatccttta
gcatgttcctgccaacagctgtggttccgtgactggctaaaggaaagcaaaaacataaca
gttcctcactatcctagcagatatgtctgtagatctcccccagaatgggacaaaaaaatg
ttagcttccttcaattacaccgaagaagattgccgggagaaaaatccttggattttgata
ggaagtgttctaggatcggttgtttttgtgtgcatggttgtcgtcatcgtcatatacaca
catcttccgaccgtcagaaatatcatctacttgattcgtttacgcaggaaaggctacgtg
agactggtgaactccgaggagtacatgtttgactgttatgtcgttagctgtgaaactgat
gaacattgggtttttcagactttgtattctacattagaagacgagtatgctttccacctg
tgcataccttcaagagattttgatgtcggtgagagcaaagctgatcaaattgaagaaaag
atgaaggaaagtaagaaaatcatcattgtgatgtctaacgattttgctcaggacgaatgg
tgtcagtttcagctagagaaagcacaggagcggatccgaaatcaaggaaaagaagcagtg
gtcctcatcatgcttcgtgacattgatcacaaacacatgacgtcaaccatcaagaatctg
ttacgtaaaagttcgtatgcaacatgggtgaaaggtaaaatcgctaccaagctgttctgg
gacattgttgtagctgctatagaaaagcctttcggaaaccctcctgttgctatttga
DBGET
integrated database retrieval system
