Magallana gigas (Pacific oyster): 105341635
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Entry
105341635 CDS
T03920
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
105341635
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
crg01007
]
105341635
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
crg03016
]
105341635
Enzymes [BR:
crg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
105341635
Amino acid related enzymes [BR:
crg01007
]
Aminoacyl-tRNA synthetase
Class II (A)
105341635
Transfer RNA biogenesis [BR:
crg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
105341635
Prokaryotic type
Other AARSs
105341635
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
TAF4
Motif
Other DBs
NCBI-GeneID:
105341635
NCBI-ProteinID:
XP_011446564
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Position
3:46514744..46527364
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AA seq
618 aa
AA seq
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MNGLQKISFCVLRTLRASARGCIVHSKNRRFLFPSASTQYFHSSVGLQLCSEQKRRLKAE
KKAKEKAEKLASQPPPPSKAKSDTAKAKPEDEEEIGDLEYFALRSKSVAELKTKGDNPYP
HKFNVSVSLEEFIDRYNGCTPGEILDEEVSVAGRIHAKRESGPKLLFYDLRGEGVKIQIM
ANAKHYPSEEEFLETNDKIKRGDIVGVRGKPGKTKKGELSIIPSEIVLLSPCLHQLPHLY
YGVKDKETRFRQRYLDLIINEPVRQKFIVRAKIINFVRKFLDEMGFLEVETPLMNMIPGG
ATAKPFITHHNELNMDLYMRVAPELYLKMLVVGGIDRVYEIGRLFRNEGIDMTHNPEFTT
CEFYMAYADYNDLMKITETLLSGMVKHIHGGYKVKYHPEGPEGPEWEVDYTPPFKRVGML
KGLEERLAVKFPDSKEFESENTRKFLDGLCVKHEVECPAPRTAARLLDKLVGEFIESECV
NPTFIIDHPQVMSPLAKWHRSEPGLTERFELFVCKKEICNAYTELNDPVVQRERFEQQAK
DKAAGDDEAMFVDENFCTSLEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMKPDI
TKKSGEETDKQPPTTPGS
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtcttcaaaagatatcattttgtgtccttcggaccctgagggcctcagcaagg
ggttgcattgtccactccaagaataggagattcctcttcccaagtgcttccacacaatat
tttcactcttctgtaggcttgcaactttgcagtgagcagaaaaggaggctcaaggctgag
aagaaggccaaagaaaaagcagaaaaacttgcaagtcagcccccacctccaagtaaggct
aaatctgacactgccaaagctaagcctgaggatgaggaagagatcggagatttggaatat
tttgcactgaggtctaaatctgtagctgaactcaagactaagggggacaatccatatcca
cacaaattcaatgtgagcgtttcactggaggagttcattgacagatacaatggttgtact
ccgggggagattctggacgaggaagtcagtgttgcagggaggatacacgcaaagagagaa
tcaggtccaaagcttctattttacgacctccgaggggaaggtgtcaaaattcagataatg
gcaaatgccaaacactatccatcagaggaggagtttctagagaccaatgacaaaataaaa
aggggagatattgtgggggtgaggggaaagccaggtaaaacaaaaaagggagaactaagt
atcataccatcagaaattgtcctgctttctccgtgtctgcaccagcttcctcacctgtac
tacggggtcaaggacaaggaaaccagattccgtcagaggtatttggaccttatcattaat
gaacctgtgagacaaaaattcattgtcagagctaagataatcaactttgtcagaaaattc
ttggatgagatgggatttttagaggtagagacacctttgatgaacatgatccctgggggt
gccacagccaagcccttcatcacccaccacaatgaactaaacatggacctatacatgagg
gtggcccctgaactctaccttaagatgttggttgttggtgggatagaccgagtctatgag
atcggtcggctgttcaggaacgagggcattgacatgacccacaaccccgagttcaccact
tgtgagttctatatggcttatgcagattacaatgacctcatgaagatcacagaaacactc
ctgtcaggtatggtcaaacacatccatggaggatacaaggtgaagtaccaccccgagggg
ccagagggaccagagtgggaggtggactacaccccgcccttcaaacgcgtcggcatgctc
aagggtctagaggagaggctggcagtcaaatttccagattccaaggagtttgaatctgaa
aatactcgtaaatttttggatggcctttgtgtgaagcatgaggtagagtgccctgcccct
agaacagctgccaggcttctggataagcttgttggtgagtttattgaatctgaatgtgtt
aaccccacatttatcattgatcaccctcaagtgatgagtccactggccaaatggcatcgg
tctgagcctgggctgacagaaagatttgaattgtttgtgtgcaagaaagagatttgtaat
gcctacacagagttaaacgacccagtggtgcagagggaaagatttgaacaacaagcaaag
gacaaagcagcaggcgacgacgaggccatgtttgtggatgagaacttctgtacgtcactg
gagtacggactgcccccgaccgccggctgggggatggggatagacagactgaccatgttc
ctgacagactccaacaatatcaaggaagtgctgctgtttccagccatgaagcctgacatc
accaaaaagtcaggcgaggagacggacaaacagccccccacaacccctggtagctga
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