Magallana gigas (Pacific oyster): 105341744
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Entry
105341744 CDS
T03920
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105341744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crg03021
]
105341744
Enzymes [BR:
crg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105341744
Transcription machinery [BR:
crg03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
105341744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
zf-Sec23_Sec24
Rpr2
MRNIP
Motif
Other DBs
NCBI-GeneID:
105341744
NCBI-ProteinID:
XP_034309904
LinkDB
All DBs
Position
10:7798122..7816555
Genome browser
AA seq
1149 aa
AA seq
DB search
MLHVGNKMSTHLKEPSLRNLTTGDYGRLKPHQHQPLQDLTKPHIDSFNALIHGGLSRAVQ
TIPPVDFALPNGDRIAFKMLDATISYPTVDLGNKYAQTLKVYPAECRERGSSYLGSLSIS
MLWKVNGRIQGTVERKIADVPIMVKSSVCNLNGLSPKELVRRGEEAEEMGGYFISNGNEK
VIRMLVMPRRNFPTCINRPSWKNRGKQYTEYGVSLRSVGDDNIGVNNVLHYLSNGSASLC
FSHQKEMFFVPVVFILKALHNVTDKFIYDQLIQGKEDNSFYKGCVIAMLRHALSENLTTQ
KTVLAYMGEIFRVKLNLPPWYTDQDVGEYLIKYCICVHLDNNVDKFHLLVYMTRKLFAFA
KGECAAESADNPMFQELLLGGQLYGMILKEKLLDWMISVKSSIDRTAKNYKEQEYVLTEV
TMNDALRHTTNITKSMEYFMASGSIHSRSGLGLMQVTGLTVVADKLNFFRYISHFRCVHR
GSFFSEMRTTAVRKLLPEAWGFLCPVHTPDGSPCGLLNHLTALAGAVTSHLSNKHLASLL
FSMGTTPCDAPAMAPMSKCFTVFLDGRILGYLHEDIAQSVEKRLRFMKVKGLSKVPPMSE
ICLVPKTKFASQYPGLYIFTSTARMIRPVWNLATDCKEWIGTFEQVYMDICITPEEAIEG
VTTHQELSEVSMLSTVAQFTPFSDFNQSPRNMYQCQMGKQTMGFPVHALDRRADNKLYKL
QTPQSPVVRPVMYDHYEMDTYPLGTNAIVAVMSYTGYDMEDAMILNKSSFERGFAHASIY
KSQIIDLNSDHHGRILQIFGCLPDNSHFLGDRLTKEGLPHIGTYLQRGDPFYSTINIQTG
KSREYSYTSDEPAYVHQIKALGDTTGIQELSRVCIVLRVKRNPIIGDKFSSRHGQKGVCS
MMWPVENMPFTESGMTPDILFNPHGYPSRMTIGMMIESMAGKSASLHGVCHDATPFQFSE
EEPAIDHFGKLLVKAGYNYYGTERMFSGVNGQELEADIFIGVVYYQRLRHMVSDKFQVRT
TGPVDPLTHQPVKGRKRGGGVRFGEMERDALIAHGTSYLLKDRLLDCSDVSKARVCTSCG
SILSPYLEKLRMGSVTDASERNRRWTCKACKQKDSVQTITLPFVFRYLVAELSAMNIKVK
LDVAPISSQ
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgctgcacgtgggaaacaaaatgtcaacacatctaaaagaaccctcgttaagaaactta
acgacgggagattacggtagattaaaaccccaccaacaccagcctctgcaagaccttacg
aaaccacacattgattccttcaatgcattgatccatggcgggttatcacgagctgtgcag
actattcctccagttgattttgccttgccaaatggagacaggatcgcatttaagatgctt
gatgccacaatatcatatccaacagtggatttaggaaataaatatgcacagacactcaag
gtttatccagcagagtgtcgtgagcgggggagttcctacctgggcagtctgagcatcagc
atgctgtggaaggtgaatggaaggatacagggcacagtcgaaaggaagatcgctgatgtc
cccatcatggtcaagtctagcgtctgcaatttaaatggtctgagtcccaaagagttagtg
cggagaggtgaagaggcagaggaaatgggagggtactttatttctaacggcaatgagaaa
gtgatcagaatgctggtcatgccgaggaggaactttcccacctgtataaatcgtccatcc
tggaagaaccgcgggaaacagtacacagagtatggtgtgtctcttcgcagcgtaggggat
gacaacattggagtgaacaatgttcttcactacttgtccaatggatcggcctccctttgc
ttcagccatcagaaggaaatgttctttgtacctgtggtcttcattctcaaggctttacac
aatgtgacagacaagtttatatatgatcagctgatccaaggcaaggaagacaactccttt
tacaaagggtgtgtcatagccatgttacgtcatgccctatcagaaaatcttaccacccag
aaaacggtgctggcgtatatgggggaaatattccgtgtgaaacttaatctcccaccctgg
tacaccgaccaagatgtgggggaatacttaatcaagtactgtatatgtgtacacctggac
aacaatgtggacaagtttcacctcttggtctatatgacgaggaagctgtttgcatttgcc
aagggtgagtgtgcggctgagagcgcggacaatccaatgtttcaggaactgctgctaggg
gggcaactgtatgggatgattcttaaggaaaaactcctcgactggatgatatctgtgaag
agttctattgataggactgctaaaaattacaaggagcaggaatatgtccttacagaggta
acaatgaacgatgctctaagacacacaaccaacatcacaaagtccatggagtacttcatg
gccagcggctccatccactcacggagtggactgggtctgatgcaggtcaccggattaaca
gtggtggcggataagctgaacttcttccgatacatctcacatttccgctgtgtacacaga
gggtcgttcttcagcgagatgagaacaacggcagtcagaaaactccttcctgaagcctgg
ggattcctctgtcctgtccacacccctgatggtagcccctgcggactactgaatcactta
acggccctcgcaggggctgtgacatctcacctgagtaacaaacacctggccagcctgttg
ttctccatgggaacgaccccgtgtgacgccccagccatggcccccatgtccaagtgcttc
accgtattcctagatggaaggattctgggataccttcacgaggacatcgctcagagtgtg
gaaaagaggcttaggttcatgaaggtcaaaggtctcagtaaggttcccccaatgtcagaa
atctgtcttgtacctaaaacaaagtttgccagccagtaccctggtctgtacatatttaca
agcactgcacgaatgattcgccctgtgtggaacctcgctacagattgtaaggagtggata
gggacatttgaacaagtgtacatggacatctgtatcacacctgaggaagccattgagggg
gtcacaacacaccaggagcttagtgaggtctccatgctgtccactgtggctcagtttaca
cctttctctgacttcaaccagagtcctcgaaacatgtatcaatgtcagatgggtaagcag
actatgggtttccctgtacatgcccttgaccggcgggcggacaacaagctgtacaaactc
cagaccccccagtccccggtggtccggccggtgatgtacgaccactacgagatggatacc
tacccgctgggtactaacgccatagtggctgtcatgtcatacactggatatgatatggaa
gatgccatgattttaaacaagtcgtcctttgaacgagggtttgcacatgccagcatttat
aaatcacagattattgacttaaacagtgaccaccatgggcgcattctacaaatatttggc
tgtctccctgataactctcatttcttgggtgaccgtctgacaaaggaggggctgccccac
ataggaacctacttacagaggggagaccctttctacagtacaatcaatatacaaaccggt
aagtcccgtgaatatagctatacctctgatgaaccggcttacgtgcaccagattaaagcc
ctgggggacacaacaggaatacaggagctgtctcgagtctgtattgtccttagggtcaag
agaaaccccatcattggagacaagttttctagtcgtcatggacagaaaggtgtttgcagt
atgatgtggccagtagagaacatgccctttacagagagtggaatgactccagacattttg
ttcaatcctcatggctacccatccagaatgaccattgggatgatgatagagagcatggcg
ggtaagtcggcctccctccatggcgtgtgtcacgacgccacgcccttccagttttccgag
gaggaaccggccattgatcactttggaaaactcctggtcaaagctggatataattattac
ggcacagagaggatgttcagtggggtaaacggccaggagttggaggcagacatctttata
ggggtggtctactatcagagactcaggcacatggtgtcagataaatttcaggtcagaaca
actggaccggttgacccccttactcatcagccggtcaaaggtcgcaaacggggtggaggg
gtcagatttggtgaaatggagcgtgatgcactgattgctcatggaacatcttatctcctt
aaagatagactgttggattgttccgatgtcagcaaggccagggtttgcacaagttgtgga
agcatcttatccccatatttagaaaaactaaggatgggctcagtgacggatgcgtcggag
cgtaaccgccgctggacctgcaaggcgtgtaaacagaaggactcggttcaaaccatcacc
ctaccattcgtgttcagatacctcgtggcagaactctcagccatgaatatcaaagtgaag
cttgacgtggccccaattagtagtcagtga
DBGET
integrated database retrieval system
